RNA–Protein interactions for RNA: ENST00000540013.5

MRE11-209, Transcript of MRE11 homolog, double strand break repair nuclease, humanhuman

TSL 1 (best) BASIC

Gene MRE11, Length 1,212 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRE11-209ENST00000540013 PCOLCEQ15113 449 aa6.67□□□□□ -1.34
MRE11-209ENST00000540013 USP30Q70CQ3 517 aa6.67□□□□□ -1.34
MRE11-209ENST00000540013 RTL10Q7L3V2 364 aa6.67□□□□□ -1.34
MRE11-209ENST00000540013 RPAINQ86UA6 219 aa6.67□□□□□ -1.34
MRE11-209ENST00000540013 CEP57L1Q8IYX8 460 aa6.67□□□□□ -1.34
MRE11-209ENST00000540013 C18orf8Q96DM3 657 aa6.67□□□□□ -1.34
MRE11-209ENST00000540013 OSBPL6Q9BZF3 934 aa6.67□□□□□ -1.34
MRE11-209ENST00000540013 ARHGAP39Q9C0H5 1083 aa6.67□□□□□ -1.34
MRE11-209ENST00000540013 EPS15L1Q9UBC2 864 aa6.67□□□□□ -1.34
MRE11-209ENST00000540013 MYO1AQ9UBC5 1043 aa6.67□□□□□ -1.34
MRE11-209ENST00000540013 SEL1LQ9UBV2 794 aa6.67□□□□□ -1.34
MRE11-209ENST00000540013 CNOT11Q9UKZ1 510 aaKnown RBP6.67□□□□□ -1.34
MRE11-209ENST00000540013 FAM184BQ9ULE4 1060 aa6.67□□□□□ -1.34
MRE11-209ENST00000540013 ZNF536O15090 1300 aa6.67□□□□□ -1.34
MRE11-209ENST00000540013 TTC21BQ7Z4L5 1316 aa6.67□□□□□ -1.34
MRE11-209ENST00000540013 TTC21AQ8NDW8 1320 aa6.67□□□□□ -1.34
MRE11-209ENST00000540013 KTN1Q86UP2 1357 aaKnown RBP6.67□□□□□ -1.34
MRE11-209ENST00000540013 RGPD1P0DJD0 1748 aa6.67□□□□□ -1.34
MRE11-209ENST00000540013 CPSF1Q10570 1443 aaKnown RBP6.67□□□□□ -1.34
MRE11-209ENST00000540013 USP54Q70EL1 1684 aa6.66□□□□□ -1.34
MRE11-209ENST00000540013 F8W8V4 182 aa6.66□□□□□ -1.34
MRE11-209ENST00000540013 MYO1FO00160 1098 aa6.66□□□□□ -1.34
MRE11-209ENST00000540013 CLGNO14967 610 aa6.66□□□□□ -1.34
MRE11-209ENST00000540013 ARHGAP6O43182 974 aa6.66□□□□□ -1.34
MRE11-209ENST00000540013 TMEM63AO94886 807 aa6.66□□□□□ -1.34
MRE11-209ENST00000540013 FSBPO95073 299 aa6.66□□□□□ -1.34
MRE11-209ENST00000540013 RTN3O95197 1032 aaPredicted RBP6.66□□□□□ -1.34
MRE11-209ENST00000540013 PCDH8O95206 1070 aa6.66□□□□□ -1.34
MRE11-209ENST00000540013 HSPA4LO95757 839 aa6.66□□□□□ -1.34
MRE11-209ENST00000540013 PFKMP08237 780 aa6.66□□□□□ -1.34
MRE11-209ENST00000540013 CTSSP25774 331 aa6.66□□□□□ -1.34
MRE11-209ENST00000540013 PAPOLAP51003 745 aaKnown RBP6.66□□□□□ -1.34
MRE11-209ENST00000540013 STAT5BP51692 787 aa6.66□□□□□ -1.34
MRE11-209ENST00000540013 CTSWP56202 376 aa6.66□□□□□ -1.34
MRE11-209ENST00000540013 FMO1Q01740 532 aa6.66□□□□□ -1.34
MRE11-209ENST00000540013 ERV3-1Q14264 604 aa6.66□□□□□ -1.34
MRE11-209ENST00000540013 PTK2BQ14289 1009 aa6.66□□□□□ -1.34
MRE11-209ENST00000540013 FGL2Q14314 439 aa6.66□□□□□ -1.34
MRE11-209ENST00000540013 CNGA2Q16280 664 aa6.66□□□□□ -1.34
MRE11-209ENST00000540013 PKN2Q16513 984 aaKnown RBP6.66□□□□□ -1.34
MRE11-209ENST00000540013 TIGD6Q17RP2 521 aa6.66□□□□□ -1.34
MRE11-209ENST00000540013 THEMIS2Q5TEJ8 643 aa6.66□□□□□ -1.34
MRE11-209ENST00000540013 ANKRD45Q5TZF3 282 aa6.66□□□□□ -1.34
MRE11-209ENST00000540013 KLHDC7AQ5VTJ3 777 aa6.66□□□□□ -1.34
MRE11-209ENST00000540013 HAUS3Q68CZ6 603 aa6.66□□□□□ -1.34
MRE11-209ENST00000540013 SLFN13Q68D06 897 aa6.66□□□□□ -1.34
MRE11-209ENST00000540013 CPLX2Q6PUV4 134 aaKnown RBP6.66□□□□□ -1.34
MRE11-209ENST00000540013 KDELC2Q7Z4H8 507 aa6.66□□□□□ -1.34
MRE11-209ENST00000540013 C2CD5Q86YS7 1000 aa6.66□□□□□ -1.34
MRE11-209ENST00000540013 FTSJ3Q8IY81 847 aaKnown RBP6.66□□□□□ -1.34
MRE11-209ENST00000540013 TXLNBQ8N3L3 684 aa6.66□□□□□ -1.34
MRE11-209ENST00000540013 TCP11L2Q8N4U5 519 aa6.66□□□□□ -1.34
MRE11-209ENST00000540013 FANCBQ8NB91 859 aa6.66□□□□□ -1.34
MRE11-209ENST00000540013 STT3BQ8TCJ2 826 aa6.66□□□□□ -1.34
MRE11-209ENST00000540013 ZNF622Q969S3 477 aaKnown RBP eCLIP6.66□□□□□ -1.34
MRE11-209ENST00000540013 SNX21Q969T3 373 aa6.66□□□□□ -1.34
MRE11-209ENST00000540013 RGMAQ96B86 450 aa6.66□□□□□ -1.34
MRE11-209ENST00000540013 SPATA17Q96L03 361 aa6.66□□□□□ -1.34
MRE11-209ENST00000540013 HEPHQ9BQS7 1158 aa6.66□□□□□ -1.34
MRE11-209ENST00000540013 PDCD2LQ9BRP1 358 aa6.66□□□□□ -1.34
MRE11-209ENST00000540013 AGXT2Q9BYV1 514 aa6.66□□□□□ -1.34
MRE11-209ENST00000540013 DHX36Q9H2U1 1008 aaKnown RBP6.66□□□□□ -1.34
MRE11-209ENST00000540013 SEMA4AQ9H3S1 761 aa6.66□□□□□ -1.34
MRE11-209ENST00000540013 TSPY26PQ9H489 355 aa6.66□□□□□ -1.34
MRE11-209ENST00000540013 ZHX1Q9UKY1 873 aaPredicted RBP6.66□□□□□ -1.34
MRE11-209ENST00000540013 MAFFQ9ULX9 164 aa6.66□□□□□ -1.34
MRE11-209ENST00000540013 PA2G4Q9UQ80 394 aaKnown RBP6.66□□□□□ -1.34
MRE11-209ENST00000540013 NR2E1Q9Y466 385 aa6.66□□□□□ -1.34
MRE11-209ENST00000540013 CFAP20Q9Y6A4 193 aaKnown RBP6.66□□□□□ -1.34
MRE11-209ENST00000540013 WNK3Q9BYP7 1800 aa6.66□□□□□ -1.34
MRE11-209ENST00000540013 AATKQ6ZMQ8 1374 aa6.66□□□□□ -1.34
MRE11-209ENST00000540013 COL5A2P05997 1499 aaPredicted RBP6.66□□□□□ -1.34
MRE11-209ENST00000540013 CD163L1Q9NR16 1453 aa6.66□□□□□ -1.34
MRE11-209ENST00000540013 PARP4Q9UKK3 1724 aaKnown RBP6.65□□□□□ -1.34
MRE11-209ENST00000540013 LTN1O94822 1766 aa6.65□□□□□ -1.34
MRE11-209ENST00000540013 SLC16A6O15403 523 aa6.65□□□□□ -1.34
MRE11-209ENST00000540013 FTLP02792 175 aaPredicted RBP6.65□□□□□ -1.34
MRE11-209ENST00000540013 CLEC2LP0C7M8 214 aa6.65□□□□□ -1.34
MRE11-209ENST00000540013 FGFR2P21802 821 aa6.65□□□□□ -1.34
MRE11-209ENST00000540013 KIF5BP33176 963 aa6.65□□□□□ -1.34
MRE11-209ENST00000540013 HOXD13P35453 343 aa6.65□□□□□ -1.34
MRE11-209ENST00000540013 WASP42768 502 aa6.65□□□□□ -1.34
MRE11-209ENST00000540013 CASP6P55212 293 aa6.65□□□□□ -1.34
MRE11-209ENST00000540013 RNASE9P60153 205 aaKnown RBP6.65□□□□□ -1.34
MRE11-209ENST00000540013 ARF3P61204 181 aaPredicted RBP6.65□□□□□ -1.34
MRE11-209ENST00000540013 ARF1P84077 181 aaKnown RBP6.65□□□□□ -1.34
MRE11-209ENST00000540013 C3orf36Q3SXR2 165 aa6.65□□□□□ -1.34
MRE11-209ENST00000540013 CCDC157Q569K6 752 aa6.65□□□□□ -1.34
MRE11-209ENST00000540013 PITRM1Q5JRX3 1037 aa6.65□□□□□ -1.34
MRE11-209ENST00000540013 ZBTB41Q5SVQ8 909 aa6.65□□□□□ -1.34
MRE11-209ENST00000540013 GLB1LQ6UWU2 654 aa6.65□□□□□ -1.34
MRE11-209ENST00000540013 UNQ6494/PRO21346Q6UXR6 183 aa6.65□□□□□ -1.34
MRE11-209ENST00000540013 GALNTL5Q7Z4T8 443 aa6.65□□□□□ -1.34
MRE11-209ENST00000540013 SESTD1Q86VW0 696 aa6.65□□□□□ -1.34
MRE11-209ENST00000540013 IQCA1Q86XH1 822 aa6.65□□□□□ -1.34
MRE11-209ENST00000540013 GLB1L2Q8IW92 636 aa6.65□□□□□ -1.34
MRE11-209ENST00000540013 TRMT2AQ8IZ69 625 aaKnown RBP6.65□□□□□ -1.34
MRE11-209ENST00000540013 BCL6BQ8N143 479 aaPredicted RBP6.65□□□□□ -1.34
MRE11-209ENST00000540013 ATP11CQ8NB49 1132 aa6.65□□□□□ -1.34
MRE11-209ENST00000540013 KCNH5Q8NCM2 988 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms