RNA–Protein interactions for RNA: ENST00000540010.1

TRAF1-202, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 4,303 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-202ENST00000540010 AADACL2Q6P093 401 aa10.42□□□□□ -0.74
TRAF1-202ENST00000540010 TMC3Q7Z5M5 1100 aa10.42□□□□□ -0.74
TRAF1-202ENST00000540010 RNF168Q8IYW5 571 aaPredicted RBP10.42□□□□□ -0.74
TRAF1-202ENST00000540010 SIX6OS1Q8N1H7 587 aa10.42□□□□□ -0.74
TRAF1-202ENST00000540010 LRRC57Q8N9N7 239 aa10.42□□□□□ -0.74
TRAF1-202ENST00000540010 TINF2Q9BSI4 451 aa10.42□□□□□ -0.74
TRAF1-202ENST00000540010 ABHD16BQ9H3Z7 469 aa10.42□□□□□ -0.74
TRAF1-202ENST00000540010 BATF3Q9NR55 127 aa10.42□□□□□ -0.74
TRAF1-202ENST00000540010 PSMC3IPQ9P2W1 217 aaPredicted RBP10.42□□□□□ -0.74
TRAF1-202ENST00000540010 RLFQ13129 1914 aa10.42□□□□□ -0.74
TRAF1-202ENST00000540010 NCANO14594 1321 aa10.42□□□□□ -0.74
TRAF1-202ENST00000540010 PDE4DIPQ5VU43 2346 aa10.42□□□□□ -0.74
TRAF1-202ENST00000540010 TTC36A6NLP5 189 aa10.42□□□□□ -0.74
TRAF1-202ENST00000540010 TTLL13PA6NNM8 815 aa10.42□□□□□ -0.74
TRAF1-202ENST00000540010 C4BPAP04003 597 aaKnown RBP10.42□□□□□ -0.74
TRAF1-202ENST00000540010 UBTFL6P0CB48 400 aaPredicted RBP10.42□□□□□ -0.74
TRAF1-202ENST00000540010 RGS7P49802 495 aa10.42□□□□□ -0.74
TRAF1-202ENST00000540010 TNFAIP2Q03169 654 aa10.42□□□□□ -0.74
TRAF1-202ENST00000540010 TMEM62Q0P6H9 643 aa10.42□□□□□ -0.74
TRAF1-202ENST00000540010 KCNT1Q5JUK3 1230 aa10.42□□□□□ -0.74
TRAF1-202ENST00000540010 HABP4Q5JVS0 413 aaKnown RBP10.42□□□□□ -0.74
TRAF1-202ENST00000540010 FAXCQ5TGI0 409 aa10.42□□□□□ -0.74
TRAF1-202ENST00000540010 WDR49Q8IV35 697 aa10.42□□□□□ -0.74
TRAF1-202ENST00000540010 ARID3BQ8IVW6 561 aaPredicted RBP10.42□□□□□ -0.74
TRAF1-202ENST00000540010 MS4A4AQ96JQ5 239 aa10.42□□□□□ -0.74
TRAF1-202ENST00000540010 ADA2Q9NZK5 511 aa10.42□□□□□ -0.74
TRAF1-202ENST00000540010 PHTF1Q9UMS5 762 aa10.42□□□□□ -0.74
TRAF1-202ENST00000540010 M0QZ92 97 aa10.42□□□□□ -0.74
TRAF1-202ENST00000540010 MSCO60682 206 aa10.42□□□□□ -0.74
TRAF1-202ENST00000540010 DNAJC6O75061 913 aa10.42□□□□□ -0.74
TRAF1-202ENST00000540010 MYL6P60660 151 aa10.42□□□□□ -0.74
TRAF1-202ENST00000540010 CUL3Q13618 768 aa10.42□□□□□ -0.74
TRAF1-202ENST00000540010 ACAD10Q6JQN1 1059 aa10.42□□□□□ -0.74
TRAF1-202ENST00000540010 TRIM72Q6ZMU5 477 aa10.42□□□□□ -0.74
TRAF1-202ENST00000540010 SPATA18Q8TC71 538 aa10.42□□□□□ -0.74
TRAF1-202ENST00000540010 ATP6V1E2Q96A05 226 aa10.42□□□□□ -0.74
TRAF1-202ENST00000540010 MTBPQ96DY7 904 aa10.42□□□□□ -0.74
TRAF1-202ENST00000540010 HAPLN2Q9GZV7 340 aa10.42□□□□□ -0.74
TRAF1-202ENST00000540010 WWP1Q9H0M0 922 aa10.42□□□□□ -0.74
TRAF1-202ENST00000540010 ZC3H7BQ9UGR2 993 aaKnown RBP10.42□□□□□ -0.74
TRAF1-202ENST00000540010 XPO7Q9UIA9 1087 aaKnown RBP10.42□□□□□ -0.74
TRAF1-202ENST00000540010 NOCTQ9UK39 431 aaKnown RBP10.42□□□□□ -0.74
TRAF1-202ENST00000540010 STYXL1Q9Y6J8 313 aa10.42□□□□□ -0.74
TRAF1-202ENST00000540010 C11orf97A0A1B0GVM6 126 aaPredicted RBP10.41□□□□□ -0.74
TRAF1-202ENST00000540010 UNCXA6NJT0 531 aa10.41□□□□□ -0.74
TRAF1-202ENST00000540010 CYP2B6P20813 491 aa10.41□□□□□ -0.74
TRAF1-202ENST00000540010 PHEXP78562 749 aa10.41□□□□□ -0.74
TRAF1-202ENST00000540010 FAM110CQ1W6H9 321 aa10.41□□□□□ -0.74
TRAF1-202ENST00000540010 PRAMEF19Q5SWL8 479 aa10.41□□□□□ -0.74
TRAF1-202ENST00000540010 RWDD4Q6NW29 188 aaKnown RBP10.41□□□□□ -0.74
TRAF1-202ENST00000540010 SLC30A9Q6PML9 568 aa10.41□□□□□ -0.74
TRAF1-202ENST00000540010 CRELD2Q6UXH1 353 aaPredicted RBP10.41□□□□□ -0.74
TRAF1-202ENST00000540010 RNF135Q8IUD6 432 aa10.41□□□□□ -0.74
TRAF1-202ENST00000540010 RCOR2Q8IZ40 523 aa10.41□□□□□ -0.74
TRAF1-202ENST00000540010 PPTC7Q8NI37 304 aa10.41□□□□□ -0.74
TRAF1-202ENST00000540010 CPB2Q96IY4 423 aa10.41□□□□□ -0.74
TRAF1-202ENST00000540010 SERPINB12Q96P63 405 aa10.41□□□□□ -0.74
TRAF1-202ENST00000540010 XAB2Q9HCS7 855 aaKnown RBP10.41□□□□□ -0.74
TRAF1-202ENST00000540010 PCMTD2Q9NV79 361 aa10.41□□□□□ -0.74
TRAF1-202ENST00000540010 GTSE1Q9NYZ3 720 aa10.41□□□□□ -0.74
TRAF1-202ENST00000540010 NEMP1O14524 444 aa10.41□□□□□ -0.74
TRAF1-202ENST00000540010 ATP9BO43861 1147 aa10.41□□□□□ -0.74
TRAF1-202ENST00000540010 ZBTB48P10074 688 aaPredicted RBP10.41□□□□□ -0.74
TRAF1-202ENST00000540010 PDGFRAP16234 1089 aa10.41□□□□□ -0.74
TRAF1-202ENST00000540010 CHRNB2P17787 502 aa10.41□□□□□ -0.74
TRAF1-202ENST00000540010 WNT7BP56706 349 aa10.41□□□□□ -0.74
TRAF1-202ENST00000540010 PTENP60484 403 aa10.41□□□□□ -0.74
TRAF1-202ENST00000540010 AP1B1Q10567 949 aa10.41□□□□□ -0.74
TRAF1-202ENST00000540010 FOXD4Q12950 439 aaPredicted RBP10.41□□□□□ -0.74
TRAF1-202ENST00000540010 PTK7Q13308 1070 aa10.41□□□□□ -0.74
TRAF1-202ENST00000540010 SGSM1Q2NKQ1 1148 aa10.41□□□□□ -0.74
TRAF1-202ENST00000540010 EEF1DP3Q658K8 133 aa10.41□□□□□ -0.74
TRAF1-202ENST00000540010 TRIM67Q6ZTA4 783 aa10.41□□□□□ -0.74
TRAF1-202ENST00000540010 FUKQ8N0W3 1084 aa10.41□□□□□ -0.74
TRAF1-202ENST00000540010 ABRAQ8N0Z2 381 aa10.41□□□□□ -0.74
TRAF1-202ENST00000540010 MAML3Q96JK9 1138 aa10.41□□□□□ -0.74
TRAF1-202ENST00000540010 SLC45A1Q9Y2W3 748 aa10.41□□□□□ -0.74
TRAF1-202ENST00000540010 PTPRJQ12913 1337 aa10.41□□□□□ -0.74
TRAF1-202ENST00000540010 ZBBXA8MT70 800 aa10.41□□□□□ -0.74
TRAF1-202ENST00000540010 CXCL8P10145 99 aa10.41□□□□□ -0.74
TRAF1-202ENST00000540010 HIC1Q14526 733 aa10.41□□□□□ -0.74
TRAF1-202ENST00000540010 CYP4A22Q5TCH4 519 aa10.41□□□□□ -0.74
TRAF1-202ENST00000540010 PPP1R13LQ8WUF5 828 aa10.41□□□□□ -0.74
TRAF1-202ENST00000540010 RMDN2Q96LZ7 410 aa10.41□□□□□ -0.74
TRAF1-202ENST00000540010 CCDC138Q96M89 665 aa10.41□□□□□ -0.74
TRAF1-202ENST00000540010 FAM111AQ96PZ2 611 aa10.41□□□□□ -0.74
TRAF1-202ENST00000540010 AP5M1Q9H0R1 490 aa10.41□□□□□ -0.74
TRAF1-202ENST00000540010 HEY2Q9UBP5 337 aa10.41□□□□□ -0.74
TRAF1-202ENST00000540010 APOEP02649 317 aa10.4□□□□□ -0.74
TRAF1-202ENST00000540010 EDN1P05305 212 aa10.4□□□□□ -0.74
TRAF1-202ENST00000540010 PYGMP11217 842 aa10.4□□□□□ -0.74
TRAF1-202ENST00000540010 RPL21P46778 160 aaKnown RBP10.4□□□□□ -0.74
TRAF1-202ENST00000540010 SERPINB4P48594 390 aa10.4□□□□□ -0.74
TRAF1-202ENST00000540010 NFX1Q12986 1120 aaKnown RBP10.4□□□□□ -0.74
TRAF1-202ENST00000540010 GRIK4Q16099 956 aa10.4□□□□□ -0.74
TRAF1-202ENST00000540010 CLEC16AQ2KHT3 1053 aa10.4□□□□□ -0.74
TRAF1-202ENST00000540010 TAPT1Q6NXT6 567 aa10.4□□□□□ -0.74
TRAF1-202ENST00000540010 PID1Q7Z2X4 250 aa10.4□□□□□ -0.74
TRAF1-202ENST00000540010 TSPYL2Q9H2G4 693 aaPredicted RBP10.4□□□□□ -0.74
TRAF1-202ENST00000540010 ZFATQ9P243 1243 aa10.4□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms