RNA–Protein interactions for RNA: ENST00000539941.6

COPS3-212, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2 BASIC

Gene COPS3, Length 1,699 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-212ENST00000539941 SLTMQ9NWH9 1034 aaKnown RBP eCLIP17.72■□□□□ 0.43
COPS3-212ENST00000539941 STIM2Q9P246 746 aa17.72■□□□□ 0.43
COPS3-212ENST00000539941 LOC101059915A0A1B0GWI6 518 aaPredicted RBP17.71■□□□□ 0.43
COPS3-212ENST00000539941 FSCN2O14926 492 aa17.71■□□□□ 0.43
COPS3-212ENST00000539941 B4GALT3O60512 393 aa17.71■□□□□ 0.43
COPS3-212ENST00000539941 KRT7P08729 469 aa17.71■□□□□ 0.43
COPS3-212ENST00000539941 CLTBP09497 229 aa17.71■□□□□ 0.43
COPS3-212ENST00000539941 DESP17661 470 aa17.71■□□□□ 0.43
COPS3-212ENST00000539941 CYP2C18P33260 490 aa17.71■□□□□ 0.43
COPS3-212ENST00000539941 PCK1P35558 622 aa17.71■□□□□ 0.43
COPS3-212ENST00000539941 PAN2Q504Q3 1202 aaKnown RBP17.71■□□□□ 0.43
COPS3-212ENST00000539941 OVOS1Q6IE37 1185 aa17.71■□□□□ 0.43
COPS3-212ENST00000539941 FAM171BQ6P995 826 aa17.71■□□□□ 0.43
COPS3-212ENST00000539941 SLC26A9Q7LBE3 791 aa17.71■□□□□ 0.43
COPS3-212ENST00000539941 NECAB2Q7Z6G3 386 aa17.71■□□□□ 0.43
COPS3-212ENST00000539941 FAM35AQ86V20 835 aa17.71■□□□□ 0.43
COPS3-212ENST00000539941 RCOR2Q8IZ40 523 aa17.71■□□□□ 0.43
COPS3-212ENST00000539941 EMC1Q8N766 993 aa17.71■□□□□ 0.43
COPS3-212ENST00000539941 CCDC26Q8TAB7 109 aa17.71■□□□□ 0.43
COPS3-212ENST00000539941 RUNDC3BQ96NL0 473 aa17.71■□□□□ 0.43
COPS3-212ENST00000539941 TMEM39AQ9NV64 488 aa17.71■□□□□ 0.43
COPS3-212ENST00000539941 ATP11BQ9Y2G3 1177 aa17.71■□□□□ 0.43
COPS3-212ENST00000539941 MYBPHLA2RUH7 354 aa17.71■□□□□ 0.42
COPS3-212ENST00000539941 I3L4J1 428 aa17.71■□□□□ 0.42
COPS3-212ENST00000539941 SART1O43290 800 aaKnown RBP17.71■□□□□ 0.42
COPS3-212ENST00000539941 LRCH4O75427 683 aa17.71■□□□□ 0.42
COPS3-212ENST00000539941 GABBR2O75899 941 aa17.71■□□□□ 0.42
COPS3-212ENST00000539941 RNF8O76064 485 aa17.71■□□□□ 0.42
COPS3-212ENST00000539941 ITGB1P05556 798 aa17.71■□□□□ 0.42
COPS3-212ENST00000539941 OR1G1P47890 313 aa17.71■□□□□ 0.42
COPS3-212ENST00000539941 COPS2P61201 443 aa17.71■□□□□ 0.42
COPS3-212ENST00000539941 VSNL1P62760 191 aa17.71■□□□□ 0.42
COPS3-212ENST00000539941 TSPY1Q01534 308 aa17.71■□□□□ 0.42
COPS3-212ENST00000539941 CYP1B1Q16678 543 aa17.71■□□□□ 0.42
COPS3-212ENST00000539941 TCTN1Q2MV58 587 aa17.71■□□□□ 0.42
COPS3-212ENST00000539941 AADACL2Q6P093 401 aa17.71■□□□□ 0.42
COPS3-212ENST00000539941 CNKSR3Q6P9H4 555 aa17.71■□□□□ 0.42
COPS3-212ENST00000539941 CLEC20AQ6ZU45 233 aa17.71■□□□□ 0.42
COPS3-212ENST00000539941 MAATS1Q7Z4T9 603 aa17.71■□□□□ 0.42
COPS3-212ENST00000539941 PIGZQ86VD9 579 aa17.71■□□□□ 0.42
COPS3-212ENST00000539941 KLHL7Q8IXQ5 586 aa17.71■□□□□ 0.42
COPS3-212ENST00000539941 HASPINQ8TF76 798 aa17.71■□□□□ 0.42
COPS3-212ENST00000539941 SMARCD1Q96GM5 515 aa17.71■□□□□ 0.42
COPS3-212ENST00000539941 PCED1BQ96HM7 432 aa17.71■□□□□ 0.42
COPS3-212ENST00000539941 TMEM175Q9BSA9 504 aa17.71■□□□□ 0.42
COPS3-212ENST00000539941 KRT82Q9NSB4 513 aa17.71■□□□□ 0.42
COPS3-212ENST00000539941 ADAM21Q9UKJ8 722 aa17.71■□□□□ 0.42
COPS3-212ENST00000539941 MICAL3Q7RTP6 2002 aa17.7■□□□□ 0.42
COPS3-212ENST00000539941 SYN3O14994 580 aa17.7■□□□□ 0.42
COPS3-212ENST00000539941 TRIM66O15016 1216 aa17.7■□□□□ 0.42
COPS3-212ENST00000539941 PHF2O75151 1096 aa17.7■□□□□ 0.42
COPS3-212ENST00000539941 PDGFRAP16234 1089 aa17.7■□□□□ 0.42
COPS3-212ENST00000539941 TNFRSF8P28908 595 aa17.7■□□□□ 0.42
COPS3-212ENST00000539941 CHRNA3P32297 505 aa17.7■□□□□ 0.42
COPS3-212ENST00000539941 PTPN7P35236 360 aa17.7■□□□□ 0.42
COPS3-212ENST00000539941 SLC25A11Q02978 314 aaKnown RBP17.7■□□□□ 0.42
COPS3-212ENST00000539941 YWHAHQ04917 246 aaPredicted RBP17.7■□□□□ 0.42
COPS3-212ENST00000539941 DAB2IPQ5VWQ8 1189 aa17.7■□□□□ 0.42
COPS3-212ENST00000539941 SCUBE3Q8IX30 993 aa17.7■□□□□ 0.42
COPS3-212ENST00000539941 RXFP2Q8WXD0 754 aa17.7■□□□□ 0.42
COPS3-212ENST00000539941 PKMYT1Q99640 499 aa17.7■□□□□ 0.42
COPS3-212ENST00000539941 DDX47Q9H0S4 455 aaKnown RBP17.7■□□□□ 0.42
COPS3-212ENST00000539941 PIK3R2O00459 728 aa17.69■□□□□ 0.42
COPS3-212ENST00000539941 CLDN5O00501 218 aa17.69■□□□□ 0.42
COPS3-212ENST00000539941 RAD51CO43502 376 aa17.69■□□□□ 0.42
COPS3-212ENST00000539941 AP1G2O75843 785 aa17.69■□□□□ 0.42
COPS3-212ENST00000539941 FLT3P36888 993 aa17.69■□□□□ 0.42
COPS3-212ENST00000539941 LMAN1P49257 510 aa17.69■□□□□ 0.42
COPS3-212ENST00000539941 IKBKEQ14164 716 aa17.69■□□□□ 0.42
COPS3-212ENST00000539941 MAP9Q49MG5 647 aa17.69■□□□□ 0.42
COPS3-212ENST00000539941 EFHC1Q5JVL4 640 aa17.69■□□□□ 0.42
COPS3-212ENST00000539941 C12orf50Q8NA57 414 aaPredicted RBP17.69■□□□□ 0.42
COPS3-212ENST00000539941 KHSRPQ92945 711 aaKnown RBP eCLIP17.69■□□□□ 0.423e-8■■■■■ 29
COPS3-212ENST00000539941 PIWIL1Q96J94 861 aaKnown RBP17.69■□□□□ 0.42
COPS3-212ENST00000539941 COLEC11Q9BWP8 271 aa17.69■□□□□ 0.42
COPS3-212ENST00000539941 NRDE2Q9H7Z3 1164 aa17.69■□□□□ 0.42
COPS3-212ENST00000539941 LRRC4Q9HBW1 653 aa17.69■□□□□ 0.42
COPS3-212ENST00000539941 DMGDHQ9UI17 866 aaKnown RBP17.69■□□□□ 0.42
COPS3-212ENST00000539941 COLQQ9Y215 455 aaPredicted RBP17.69■□□□□ 0.42
COPS3-212ENST00000539941 TADA2AO75478 443 aa17.68■□□□□ 0.42
COPS3-212ENST00000539941 FBXO21O94952 628 aa17.68■□□□□ 0.42
COPS3-212ENST00000539941 OAZ2O95190 189 aa17.68■□□□□ 0.42
COPS3-212ENST00000539941 SLC34A2O95436 690 aa17.68■□□□□ 0.42
COPS3-212ENST00000539941 LCP1P13796 627 aa17.68■□□□□ 0.42
COPS3-212ENST00000539941 SDC4P31431 198 aa17.68■□□□□ 0.42
COPS3-212ENST00000539941 PTPN9P43378 593 aa17.68■□□□□ 0.42
COPS3-212ENST00000539941 CORO7P57737 925 aa17.68■□□□□ 0.42
COPS3-212ENST00000539941 DHX34Q14147 1143 aaKnown RBP17.68■□□□□ 0.42
COPS3-212ENST00000539941 CCDC142Q17RM4 750 aa17.68■□□□□ 0.42
COPS3-212ENST00000539941 ODF2Q5BJF6 829 aa17.68■□□□□ 0.42
COPS3-212ENST00000539941 HABP4Q5JVS0 413 aaKnown RBP17.68■□□□□ 0.42
COPS3-212ENST00000539941 DEFB128Q7Z7B8 93 aa17.68■□□□□ 0.42
COPS3-212ENST00000539941 CCDC50Q8IVM0 306 aa17.68■□□□□ 0.42
COPS3-212ENST00000539941 IFT20Q8IY31 132 aa17.68■□□□□ 0.42
COPS3-212ENST00000539941 ARFGAP1Q8N6T3 406 aa17.68■□□□□ 0.42
COPS3-212ENST00000539941 PRELID2Q8N945 189 aa17.68■□□□□ 0.42
COPS3-212ENST00000539941 HDAC7Q8WUI4 952 aa17.68■□□□□ 0.42
COPS3-212ENST00000539941 MYLPFQ96A32 169 aa17.68■□□□□ 0.42
COPS3-212ENST00000539941 ACBD3Q9H3P7 528 aa17.68■□□□□ 0.42
COPS3-212ENST00000539941 CSNK1G1Q9HCP0 422 aa17.68■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms