RNA–Protein interactions for RNA: ENST00000539921.5

SNHG1-211, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2 BASIC

Gene SNHG1, Length 1,071 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-211ENST00000539921 SLC5A3P53794 718 aa6.38□□□□□ -1.39
SNHG1-211ENST00000539921 TMBIM6P55061 237 aa6.38□□□□□ -1.39
SNHG1-211ENST00000539921 WDR4P57081 412 aaKnown RBP6.38□□□□□ -1.39
SNHG1-211ENST00000539921 MYBPC1Q00872 1141 aa6.38□□□□□ -1.39
SNHG1-211ENST00000539921 BNC1Q01954 994 aa6.38□□□□□ -1.39
SNHG1-211ENST00000539921 GHRHRQ02643 423 aa6.38□□□□□ -1.39
SNHG1-211ENST00000539921 SSRP1Q08945 709 aaKnown RBP6.38□□□□□ -1.39
SNHG1-211ENST00000539921 CALCOCO2Q13137 446 aa6.38□□□□□ -1.39
SNHG1-211ENST00000539921 BAMBIQ13145 260 aa6.38□□□□□ -1.39
SNHG1-211ENST00000539921 TARDBPQ13148 414 aaKnown RBP eCLIP6.38□□□□□ -1.39
SNHG1-211ENST00000539921 SELENBP1Q13228 472 aa6.38□□□□□ -1.39
SNHG1-211ENST00000539921 SF3B4Q15427 424 aaKnown RBP eCLIP6.38□□□□□ -1.394e-47■■■■■ 46.5
SNHG1-211ENST00000539921 TSC22D1Q15714 1073 aa6.38□□□□□ -1.39
SNHG1-211ENST00000539921 CCDC58Q4VC31 144 aa6.38□□□□□ -1.39
SNHG1-211ENST00000539921 ARSIQ5FYB1 569 aa6.38□□□□□ -1.39
SNHG1-211ENST00000539921 EARS2Q5JPH6 523 aaKnown RBP6.38□□□□□ -1.39
SNHG1-211ENST00000539921 TJAP1Q5JTD0 557 aa6.38□□□□□ -1.39
SNHG1-211ENST00000539921 SLFN13Q68D06 897 aa6.38□□□□□ -1.39
SNHG1-211ENST00000539921 ZNF746Q6NUN9 644 aaPredicted RBP6.38□□□□□ -1.39
SNHG1-211ENST00000539921 PGM2L1Q6PCE3 622 aa6.38□□□□□ -1.39
SNHG1-211ENST00000539921 FBXL19Q6PCT2 694 aa6.38□□□□□ -1.39
SNHG1-211ENST00000539921 RHBDF2Q6PJF5 856 aa6.38□□□□□ -1.39
SNHG1-211ENST00000539921 APOA5Q6Q788 366 aa6.38□□□□□ -1.39
SNHG1-211ENST00000539921 GSTA5Q7RTV2 222 aa6.38□□□□□ -1.39
SNHG1-211ENST00000539921 KCTD20Q7Z5Y7 419 aa6.38□□□□□ -1.39
SNHG1-211ENST00000539921 C14orf80Q86SX3 495 aa6.38□□□□□ -1.39
SNHG1-211ENST00000539921 PRUNE1Q86TP1 453 aa6.38□□□□□ -1.39
SNHG1-211ENST00000539921 NOP9Q86U38 636 aaKnown RBP6.38□□□□□ -1.39
SNHG1-211ENST00000539921 MTDHQ86UE4 582 aaKnown RBP6.38□□□□□ -1.39
SNHG1-211ENST00000539921 TRABD2AQ86V40 505 aa6.38□□□□□ -1.39
SNHG1-211ENST00000539921 GPBP1Q86WP2 473 aa6.38□□□□□ -1.39
SNHG1-211ENST00000539921 CCDC25Q86WR0 208 aa6.38□□□□□ -1.39
SNHG1-211ENST00000539921 CHERPQ8IWX8 916 aaKnown RBP6.38□□□□□ -1.39
SNHG1-211ENST00000539921 DIS3L2Q8IYB7 885 aaKnown RBP6.38□□□□□ -1.39
SNHG1-211ENST00000539921 PM20D2Q8IYS1 436 aa6.38□□□□□ -1.39
SNHG1-211ENST00000539921 SLC38A6Q8IZM9 456 aa6.38□□□□□ -1.39
SNHG1-211ENST00000539921 CCDC33Q8N5R6 958 aa6.38□□□□□ -1.39
SNHG1-211ENST00000539921 ZNF454Q8N9F8 522 aa6.38□□□□□ -1.39
SNHG1-211ENST00000539921 ASCC1Q8N9N2 400 aaKnown RBP6.38□□□□□ -1.39
SNHG1-211ENST00000539921 SLC30A5Q8TAD4 765 aa6.38□□□□□ -1.39
SNHG1-211ENST00000539921 LHFPL5Q8TAF8 219 aa6.38□□□□□ -1.39
SNHG1-211ENST00000539921 RAB3IL1Q8TBN0 382 aa6.38□□□□□ -1.39
SNHG1-211ENST00000539921 U2AF1L4Q8WU68 220 aaKnown RBP6.38□□□□□ -1.39
SNHG1-211ENST00000539921 NLRP7Q8WX94 980 aa6.38□□□□□ -1.39
SNHG1-211ENST00000539921 CELF1Q92879 486 aaKnown RBP6.38□□□□□ -1.39
SNHG1-211ENST00000539921 FAM149B1Q96BN6 582 aa6.38□□□□□ -1.39
SNHG1-211ENST00000539921 ISOC1Q96CN7 298 aa6.38□□□□□ -1.39
SNHG1-211ENST00000539921 NRBF2Q96F24 287 aa6.38□□□□□ -1.39
SNHG1-211ENST00000539921 TNIP3Q96KP6 325 aa6.38□□□□□ -1.39
SNHG1-211ENST00000539921 CEP170P1Q96L14 293 aa6.38□□□□□ -1.39
SNHG1-211ENST00000539921 VPS35Q96QK1 796 aa6.38□□□□□ -1.39
SNHG1-211ENST00000539921 PSMB7Q99436 277 aa6.38□□□□□ -1.39
SNHG1-211ENST00000539921 PHOX2BQ99453 314 aa6.38□□□□□ -1.39
SNHG1-211ENST00000539921 HINFPQ9BQA5 517 aa6.38□□□□□ -1.39
SNHG1-211ENST00000539921 CENPOQ9BU64 300 aa6.38□□□□□ -1.39
SNHG1-211ENST00000539921 BEGAINQ9BUH8 593 aa6.38□□□□□ -1.39
SNHG1-211ENST00000539921 OSBPL11Q9BXB4 747 aa6.38□□□□□ -1.39
SNHG1-211ENST00000539921 MRPL9Q9BYD2 267 aaKnown RBP6.38□□□□□ -1.39
SNHG1-211ENST00000539921 DCLK3Q9C098 648 aa6.38□□□□□ -1.39
SNHG1-211ENST00000539921 MKRN2Q9H000 416 aaKnown RBP6.38□□□□□ -1.39
SNHG1-211ENST00000539921 KLHL25Q9H0H3 589 aa6.38□□□□□ -1.39
SNHG1-211ENST00000539921 CCDC8Q9H0W5 538 aaPredicted RBP6.38□□□□□ -1.39
SNHG1-211ENST00000539921 DPEP3Q9H4B8 488 aa6.38□□□□□ -1.39
SNHG1-211ENST00000539921 IFT22Q9H7X7 185 aa6.38□□□□□ -1.39
SNHG1-211ENST00000539921 ANKHQ9HCJ1 492 aa6.38□□□□□ -1.39
SNHG1-211ENST00000539921 RAVER2Q9HCJ3 691 aaKnown RBP6.38□□□□□ -1.39
SNHG1-211ENST00000539921 KCNK9Q9NPC2 374 aa6.38□□□□□ -1.39
SNHG1-211ENST00000539921 CD93Q9NPY3 652 aa6.38□□□□□ -1.39
SNHG1-211ENST00000539921 ATP13A2Q9NQ11 1180 aa6.38□□□□□ -1.39
SNHG1-211ENST00000539921 COPRSQ9NQ92 184 aa6.38□□□□□ -1.39
SNHG1-211ENST00000539921 FAM207AQ9NSI2 230 aaPredicted RBP6.38□□□□□ -1.39
SNHG1-211ENST00000539921 STAU2Q9NUL3 570 aaKnown RBP eCLIP6.38□□□□□ -1.39
SNHG1-211ENST00000539921 ARL8BQ9NVJ2 186 aa6.38□□□□□ -1.39
SNHG1-211ENST00000539921 KBTBD4Q9NVX7 518 aa6.38□□□□□ -1.39
SNHG1-211ENST00000539921 PPP1R14DQ9NXH3 145 aa6.38□□□□□ -1.39
SNHG1-211ENST00000539921 GDAP2Q9NXN4 497 aa6.38□□□□□ -1.39
SNHG1-211ENST00000539921 VPS54Q9P1Q0 977 aa6.38□□□□□ -1.39
SNHG1-211ENST00000539921 TAGLN3Q9UI15 199 aa6.38□□□□□ -1.39
SNHG1-211ENST00000539921 SLC24A2Q9UI40 661 aa6.38□□□□□ -1.39
SNHG1-211ENST00000539921 PPM1HQ9ULR3 514 aa6.38□□□□□ -1.39
SNHG1-211ENST00000539921 PCDHA4Q9UN74 947 aa6.38□□□□□ -1.39
SNHG1-211ENST00000539921 SOX13Q9UN79 622 aa6.38□□□□□ -1.39
SNHG1-211ENST00000539921 SLC8A2Q9UPR5 921 aa6.38□□□□□ -1.39
SNHG1-211ENST00000539921 TESMINQ9Y4I5 508 aa6.38□□□□□ -1.39
SNHG1-211ENST00000539921 AP4B1Q9Y6B7 739 aa6.38□□□□□ -1.39
SNHG1-211ENST00000539921 NFASCO94856 1347 aa6.38□□□□□ -1.39
SNHG1-211ENST00000539921 UBE4BO95155 1302 aa6.38□□□□□ -1.39
SNHG1-211ENST00000539921 MYO3BQ8WXR4 1341 aa6.38□□□□□ -1.39
SNHG1-211ENST00000539921 PCDH11YQ9BZA8 1340 aa6.38□□□□□ -1.39
SNHG1-211ENST00000539921 LRP5O75197 1615 aa6.38□□□□□ -1.39
SNHG1-211ENST00000539921 RREB1Q92766 1687 aa6.38□□□□□ -1.39
SNHG1-211ENST00000539921 TIAM2Q8IVF5 1701 aa6.37□□□□□ -1.39
SNHG1-211ENST00000539921 SIPA1L2Q9P2F8 1722 aaPredicted RBP6.37□□□□□ -1.39
SNHG1-211ENST00000539921 A0A087WZG4 1122 aa6.37□□□□□ -1.39
SNHG1-211ENST00000539921 GOLGA8IPA6NC78 632 aa6.37□□□□□ -1.39
SNHG1-211ENST00000539921 FAM83GA6ND36 823 aa6.37□□□□□ -1.39
SNHG1-211ENST00000539921 HNRNPCL2B2RXH8 293 aa6.37□□□□□ -1.39
SNHG1-211ENST00000539921 CLDN25C9JDP6 229 aa6.37□□□□□ -1.39
SNHG1-211ENST00000539921 H3BSA7 217 aa6.37□□□□□ -1.39
SNHG1-211ENST00000539921 TK2O00142 265 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms