RNA–Protein interactions for RNA: ENST00000539746.1

VTN-202, Transcript of vitronectin, humanhuman

TSL 2

Gene VTN, Length 609 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTN-202ENST00000539746 PAAF1Q9BRP4 392 aa12.38□□□□□ -0.43
VTN-202ENST00000539746 B3GNT5Q9BYG0 378 aa12.38□□□□□ -0.43
VTN-202ENST00000539746 FRMD8P1Q9BZ68 369 aaPredicted RBP12.38□□□□□ -0.43
VTN-202ENST00000539746 CXCL16Q9H2A7 254 aa12.38□□□□□ -0.43
VTN-202ENST00000539746 DPEP3Q9H4B8 488 aa12.38□□□□□ -0.43
VTN-202ENST00000539746 MARCH5Q9NX47 278 aa12.38□□□□□ -0.43
VTN-202ENST00000539746 TAS2R14Q9NYV8 317 aa12.38□□□□□ -0.43
VTN-202ENST00000539746 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.38□□□□□ -0.43
VTN-202ENST00000539746 IRAK3Q9Y616 596 aa12.38□□□□□ -0.43
VTN-202ENST00000539746 MRPL42Q9Y6G3 142 aaKnown RBP12.38□□□□□ -0.43
VTN-202ENST00000539746 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.37□□□□□ -0.43
VTN-202ENST00000539746 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.37□□□□□ -0.43
VTN-202ENST00000539746 E5RJQ4 531 aa12.37□□□□□ -0.43
VTN-202ENST00000539746 C5orf67F2Z3F1 127 aa12.37□□□□□ -0.43
VTN-202ENST00000539746 PRPSAP2O60256 369 aa12.37□□□□□ -0.43
VTN-202ENST00000539746 BUB1BO60566 1050 aaPredicted RBP12.37□□□□□ -0.43
VTN-202ENST00000539746 FGF18O76093 207 aa12.37□□□□□ -0.43
VTN-202ENST00000539746 CSH1P0DML2 217 aa12.37□□□□□ -0.43
VTN-202ENST00000539746 CSH2P0DML3 217 aa12.37□□□□□ -0.43
VTN-202ENST00000539746 CTSAP10619 480 aa12.37□□□□□ -0.43
VTN-202ENST00000539746 PDGFRAP16234 1089 aa12.37□□□□□ -0.43
VTN-202ENST00000539746 ACAT1P24752 427 aaKnown RBP12.37□□□□□ -0.43
VTN-202ENST00000539746 CTNNA2P26232 953 aa12.37□□□□□ -0.43
VTN-202ENST00000539746 HTR7P34969 479 aa12.37□□□□□ -0.43
VTN-202ENST00000539746 CTNNB1P35222 781 aa12.37□□□□□ -0.43
VTN-202ENST00000539746 NOS2P35228 1153 aa12.37□□□□□ -0.43
VTN-202ENST00000539746 SSR1P43307 286 aaKnown RBP12.37□□□□□ -0.43
VTN-202ENST00000539746 EPHB3P54753 998 aa12.37□□□□□ -0.43
VTN-202ENST00000539746 MAP3K7CLP57077 242 aa12.37□□□□□ -0.43
VTN-202ENST00000539746 MRPS5P82675 430 aaKnown RBP12.37□□□□□ -0.43
VTN-202ENST00000539746 PTPROQ16827 1216 aa12.37□□□□□ -0.43
VTN-202ENST00000539746 RAB41Q5JT25 222 aa12.37□□□□□ -0.43
VTN-202ENST00000539746 ZFYVE27Q5T4F4 411 aa12.37□□□□□ -0.43
VTN-202ENST00000539746 RASIP1Q5U651 963 aa12.37□□□□□ -0.43
VTN-202ENST00000539746 STRADAQ7RTN6 431 aa12.37□□□□□ -0.43
VTN-202ENST00000539746 MON1AQ86VX9 555 aa12.37□□□□□ -0.43
VTN-202ENST00000539746 OSTM1Q86WC4 334 aa12.37□□□□□ -0.43
VTN-202ENST00000539746 TTC30AQ86WT1 665 aa12.37□□□□□ -0.43
VTN-202ENST00000539746 RNF168Q8IYW5 571 aaPredicted RBP12.37□□□□□ -0.43
VTN-202ENST00000539746 LRRC57Q8N9N7 239 aa12.37□□□□□ -0.43
VTN-202ENST00000539746 LEMD2Q8NC56 503 aa12.37□□□□□ -0.43
VTN-202ENST00000539746 RNF139Q8WU17 664 aa12.37□□□□□ -0.43
VTN-202ENST00000539746 FAM149B1Q96BN6 582 aa12.37□□□□□ -0.43
VTN-202ENST00000539746 TGS1Q96RS0 853 aaKnown RBP12.37□□□□□ -0.43
VTN-202ENST00000539746 PACSIN1Q9BY11 444 aa12.37□□□□□ -0.43
VTN-202ENST00000539746 UBE2OQ9C0C9 1292 aaKnown RBP12.37□□□□□ -0.43
VTN-202ENST00000539746 ACP6Q9NPH0 428 aa12.37□□□□□ -0.43
VTN-202ENST00000539746 CRTAC1Q9NQ79 661 aa12.37□□□□□ -0.43
VTN-202ENST00000539746 ABCC13Q9NSE7 274 aa12.37□□□□□ -0.43
VTN-202ENST00000539746 ABI2Q9NYB9 513 aaPredicted RBP12.37□□□□□ -0.43
VTN-202ENST00000539746 SLC12A6Q9UHW9 1150 aa12.37□□□□□ -0.43
VTN-202ENST00000539746 TIMM13Q9Y5L4 95 aaPredicted RBP12.37□□□□□ -0.43
VTN-202ENST00000539746 ALG6Q9Y672 507 aa12.37□□□□□ -0.43
VTN-202ENST00000539746 CLUHO75153 1309 aa12.37□□□□□ -0.43
VTN-202ENST00000539746 KIAA0100Q14667 2235 aaKnown RBP12.36□□□□□ -0.43
VTN-202ENST00000539746 MYBPHLA2RUH7 354 aa12.36□□□□□ -0.43
VTN-202ENST00000539746 CTAGE15A4D2H0 777 aa12.36□□□□□ -0.43
VTN-202ENST00000539746 ZNF487B1APH4 448 aa12.36□□□□□ -0.43
VTN-202ENST00000539746 GOLGA8SH3BPF8 625 aa12.36□□□□□ -0.43
VTN-202ENST00000539746 CCDC188H7C350 402 aa12.36□□□□□ -0.43
VTN-202ENST00000539746 PGRMC1O00264 195 aaKnown RBP12.36□□□□□ -0.43
VTN-202ENST00000539746 PRRG1O14668 218 aa12.36□□□□□ -0.43
VTN-202ENST00000539746 DAB1O75553 588 aa12.36□□□□□ -0.43
VTN-202ENST00000539746 CTAGE8P0CG41 777 aa12.36□□□□□ -0.43
VTN-202ENST00000539746 ATF2P15336 505 aa12.36□□□□□ -0.43
VTN-202ENST00000539746 PFKLP17858 780 aa12.36□□□□□ -0.43
VTN-202ENST00000539746 BDNFP23560 247 aa12.36□□□□□ -0.43
VTN-202ENST00000539746 ITGB8P26012 769 aa12.36□□□□□ -0.43
VTN-202ENST00000539746 CTNNA1P35221 906 aaKnown RBP12.36□□□□□ -0.43
VTN-202ENST00000539746 MATKP42679 507 aa12.36□□□□□ -0.43
VTN-202ENST00000539746 TKTL1P51854 596 aa12.36□□□□□ -0.43
VTN-202ENST00000539746 LMNB2Q03252 620 aa12.36□□□□□ -0.43
VTN-202ENST00000539746 ORC1Q13415 861 aa12.36□□□□□ -0.43
VTN-202ENST00000539746 RAB33AQ14088 237 aa12.36□□□□□ -0.43
VTN-202ENST00000539746 MGAT5BQ3V5L5 792 aa12.36□□□□□ -0.43
VTN-202ENST00000539746 PMF1Q6P1K2 205 aa12.36□□□□□ -0.43
VTN-202ENST00000539746 FAM117BQ6P1L5 589 aa12.36□□□□□ -0.43
VTN-202ENST00000539746 OLFML1Q6UWY5 402 aa12.36□□□□□ -0.43
VTN-202ENST00000539746 CD300LGQ6UXG3 332 aa12.36□□□□□ -0.43
VTN-202ENST00000539746 DENND5BQ6ZUT9 1274 aa12.36□□□□□ -0.43
VTN-202ENST00000539746 BZW1Q7L1Q6 419 aaKnown RBP12.36□□□□□ -0.43
VTN-202ENST00000539746 TMC7Q7Z402 723 aa12.36□□□□□ -0.43
VTN-202ENST00000539746 CTAGE6Q86UF2 777 aa12.36□□□□□ -0.43
VTN-202ENST00000539746 PALB2Q86YC2 1186 aa12.36□□□□□ -0.43
VTN-202ENST00000539746 CTAGE4Q8IX94 777 aa12.36□□□□□ -0.43
VTN-202ENST00000539746 RCOR2Q8IZ40 523 aa12.36□□□□□ -0.43
VTN-202ENST00000539746 VPS52Q8N1B4 723 aa12.36□□□□□ -0.43
VTN-202ENST00000539746 TEKT4Q8WW24 435 aa12.36□□□□□ -0.43
VTN-202ENST00000539746 RUBCNQ92622 972 aa12.36□□□□□ -0.43
VTN-202ENST00000539746 HES6Q96HZ4 224 aa12.36□□□□□ -0.43
VTN-202ENST00000539746 GCNAQ96QF7 691 aa12.36□□□□□ -0.43
VTN-202ENST00000539746 ZSWIM1Q9BR11 485 aa12.36□□□□□ -0.43
VTN-202ENST00000539746 GPR62Q9BZJ7 368 aa12.36□□□□□ -0.43
VTN-202ENST00000539746 PLEKHA4Q9H4M7 779 aa12.36□□□□□ -0.43
VTN-202ENST00000539746 RXFP1Q9HBX9 757 aa12.36□□□□□ -0.43
VTN-202ENST00000539746 ENTPD7Q9NQZ7 604 aa12.36□□□□□ -0.43
VTN-202ENST00000539746 TLR8Q9NR97 1041 aaKnown RBP12.36□□□□□ -0.43
VTN-202ENST00000539746 CLIC5Q9NZA1 410 aa12.36□□□□□ -0.43
VTN-202ENST00000539746 TTC7AQ9ULT0 858 aaPredicted RBP12.36□□□□□ -0.43
VTN-202ENST00000539746 ZMYND8Q9ULU4 1186 aaPredicted RBP12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms