RNA–Protein interactions for RNA: ENST00000539739.5

DDB1-216, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 5

Gene DDB1, Length 1,624 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-216ENST00000539739 AKR1B10O60218 316 aa16.27■□□□□ 0.19
DDB1-216ENST00000539739 RFPL2O75678 378 aa16.27■□□□□ 0.19
DDB1-216ENST00000539739 RTN3O95197 1032 aaPredicted RBP16.27■□□□□ 0.19
DDB1-216ENST00000539739 GLP2RO95838 553 aa16.27■□□□□ 0.19
DDB1-216ENST00000539739 HOXB8P17481 243 aaPredicted RBP16.27■□□□□ 0.19
DDB1-216ENST00000539739 RGS7P49802 495 aa16.27■□□□□ 0.19
DDB1-216ENST00000539739 NOMO3P69849 1222 aa16.27■□□□□ 0.19
DDB1-216ENST00000539739 CLEC16AQ2KHT3 1053 aa16.27■□□□□ 0.19
DDB1-216ENST00000539739 NAA35Q5VZE5 725 aa16.27■□□□□ 0.19
DDB1-216ENST00000539739 PMF1Q6P1K2 205 aa16.27■□□□□ 0.19
DDB1-216ENST00000539739 GPR152Q8TDT2 470 aa16.27■□□□□ 0.19
DDB1-216ENST00000539739 CPA5Q8WXQ8 436 aa16.27■□□□□ 0.19
DDB1-216ENST00000539739 KCTD13Q8WZ19 329 aa16.27■□□□□ 0.19
DDB1-216ENST00000539739 PCDHB18PQ96TA0 734 aa16.27■□□□□ 0.19
DDB1-216ENST00000539739 BAG1Q99933 345 aaPredicted RBP16.27■□□□□ 0.19
DDB1-216ENST00000539739 MIS12Q9H081 205 aa16.27■□□□□ 0.19
DDB1-216ENST00000539739 SYNCQ9H7C4 482 aa16.27■□□□□ 0.19
DDB1-216ENST00000539739 CYLDQ9NQC7 956 aa16.27■□□□□ 0.19
DDB1-216ENST00000539739 GEMIN8Q9NWZ8 242 aaKnown RBP16.27■□□□□ 0.19
DDB1-216ENST00000539739 COMMD8Q9NX08 183 aa16.27■□□□□ 0.19
DDB1-216ENST00000539739 MYH10P35580 1976 aa16.26■□□□□ 0.19
DDB1-216ENST00000539739 PTPRDP23468 1912 aa16.26■□□□□ 0.19
DDB1-216ENST00000539739 MTCL1Q9Y4B5 1905 aaKnown RBP16.26■□□□□ 0.19
DDB1-216ENST00000539739 CCDC195A0A1B0GUA6 201 aa16.26■□□□□ 0.19
DDB1-216ENST00000539739 SLC38A8A6NNN8 435 aa16.26■□□□□ 0.19
DDB1-216ENST00000539739 TULP2O00295 520 aa16.26■□□□□ 0.19
DDB1-216ENST00000539739 DDX3XO00571 662 aaKnown RBP eCLIP16.26■□□□□ 0.19
DDB1-216ENST00000539739 CCL16O15467 120 aa16.26■□□□□ 0.19
DDB1-216ENST00000539739 LINC01565O15544 149 aa16.26■□□□□ 0.19
DDB1-216ENST00000539739 GZMAP12544 262 aa16.26■□□□□ 0.19
DDB1-216ENST00000539739 UNGP13051 313 aaPredicted RBP16.26■□□□□ 0.19
DDB1-216ENST00000539739 NSFP46459 744 aaKnown RBP16.26■□□□□ 0.19
DDB1-216ENST00000539739 SLC5A3P53794 718 aa16.26■□□□□ 0.19
DDB1-216ENST00000539739 GABPB1Q06547 395 aaPredicted RBP16.26■□□□□ 0.19
DDB1-216ENST00000539739 PDCLQ13371 301 aa16.26■□□□□ 0.19
DDB1-216ENST00000539739 CTC1Q2NKJ3 1217 aa16.26■□□□□ 0.19
DDB1-216ENST00000539739 ANKRD54Q6NXT1 300 aa16.26■□□□□ 0.19
DDB1-216ENST00000539739 ERICH1Q86X53 443 aa16.26■□□□□ 0.19
DDB1-216ENST00000539739 CCDC170Q8IYT3 715 aa16.26■□□□□ 0.19
DDB1-216ENST00000539739 WDTC1Q8N5D0 677 aa16.26■□□□□ 0.19
DDB1-216ENST00000539739 CMASQ8NFW8 434 aaPredicted RBP16.26■□□□□ 0.19
DDB1-216ENST00000539739 PSMG2Q969U7 264 aa16.26■□□□□ 0.19
DDB1-216ENST00000539739 PABPC5Q96DU9 382 aaKnown RBP16.26■□□□□ 0.19
DDB1-216ENST00000539739 PPP1R13BQ96KQ4 1090 aa16.26■□□□□ 0.19
DDB1-216ENST00000539739 PRKD2Q9BZL6 878 aa16.26■□□□□ 0.19
DDB1-216ENST00000539739 FBXO44Q9H4M3 255 aa16.26■□□□□ 0.19
DDB1-216ENST00000539739 SZT2Q5T011 3432 aa16.25■□□□□ 0.19
DDB1-216ENST00000539739 HHLA1C9JL84 531 aa16.25■□□□□ 0.19
DDB1-216ENST00000539739 TNFRSF10BO14763 440 aa16.25■□□□□ 0.19
DDB1-216ENST00000539739 POU2F2P09086 479 aa16.25■□□□□ 0.19
DDB1-216ENST00000539739 FECHP22830 423 aa16.25■□□□□ 0.19
DDB1-216ENST00000539739 CYLC1P35663 651 aaPredicted RBP16.25■□□□□ 0.19
DDB1-216ENST00000539739 KIF11P52732 1056 aa16.25■□□□□ 0.19
DDB1-216ENST00000539739 SKIV2LQ15477 1246 aaKnown RBP16.25■□□□□ 0.19
DDB1-216ENST00000539739 CCDC85BQ15834 202 aaPredicted RBP16.25■□□□□ 0.19
DDB1-216ENST00000539739 DNAJB7Q7Z6W7 309 aaPredicted RBP16.25■□□□□ 0.19
DDB1-216ENST00000539739 SIX6OS1Q8N1H7 587 aa16.25■□□□□ 0.19
DDB1-216ENST00000539739 CCDC112Q8NEF3 446 aa16.25■□□□□ 0.19
DDB1-216ENST00000539739 SLC30A5Q8TAD4 765 aa16.25■□□□□ 0.19
DDB1-216ENST00000539739 SLC4A5Q9BY07 1137 aa16.25■□□□□ 0.19
DDB1-216ENST00000539739 PIDD1Q9HB75 910 aa16.25■□□□□ 0.19
DDB1-216ENST00000539739 UXTQ9UBK9 157 aaPredicted RBP16.25■□□□□ 0.19
DDB1-216ENST00000539739 CYTH4Q9UIA0 394 aa16.25■□□□□ 0.19
DDB1-216ENST00000539739 MAGED2Q9UNF1 606 aaPredicted RBP16.25■□□□□ 0.19
DDB1-216ENST00000539739 LCP1P13796 627 aa16.24■□□□□ 0.19
DDB1-216ENST00000539739 PTPN2P17706 415 aa16.24■□□□□ 0.19
DDB1-216ENST00000539739 YWHAQP27348 245 aa16.24■□□□□ 0.19
DDB1-216ENST00000539739 TKTL1P51854 596 aa16.24■□□□□ 0.19
DDB1-216ENST00000539739 CENPCQ03188 943 aa16.24■□□□□ 0.19
DDB1-216ENST00000539739 IFRD2Q12894 506 aaPredicted RBP16.24■□□□□ 0.19
DDB1-216ENST00000539739 COL19A1Q14993 1142 aa16.24■□□□□ 0.19
DDB1-216ENST00000539739 SLC18A3Q16572 532 aa16.24■□□□□ 0.19
DDB1-216ENST00000539739 RAB41Q5JT25 222 aa16.24■□□□□ 0.19
DDB1-216ENST00000539739 RARS2Q5T160 578 aaKnown RBP16.24■□□□□ 0.19
DDB1-216ENST00000539739 ACAD10Q6JQN1 1059 aa16.24■□□□□ 0.19
DDB1-216ENST00000539739 TMEM110Q86TL2 294 aa16.24■□□□□ 0.19
DDB1-216ENST00000539739 LRRC8AQ8IWT6 810 aa16.24■□□□□ 0.19
DDB1-216ENST00000539739 C12orf76Q8N812 135 aaPredicted RBP16.24■□□□□ 0.19
DDB1-216ENST00000539739 CPXM1Q96SM3 734 aa16.24■□□□□ 0.19
DDB1-216ENST00000539739 A0A087X0T9 212 aa16.23■□□□□ 0.19
DDB1-216ENST00000539739 TMCO5BA8MYB1 307 aa16.23■□□□□ 0.19
DDB1-216ENST00000539739 RTN2O75298 545 aa16.23■□□□□ 0.19
DDB1-216ENST00000539739 FBXO21O94952 628 aa16.23■□□□□ 0.19
DDB1-216ENST00000539739 FAM228BP0C875 321 aa16.23■□□□□ 0.19
DDB1-216ENST00000539739 RPL34P49207 117 aaKnown RBP16.23■□□□□ 0.19
DDB1-216ENST00000539739 ADIGQ0VDE8 80 aa16.23■□□□□ 0.19
DDB1-216ENST00000539739 MTMR3Q13615 1198 aa16.23■□□□□ 0.19
DDB1-216ENST00000539739 ASTE1Q2TB18 679 aaPredicted RBP16.23■□□□□ 0.19
DDB1-216ENST00000539739 CCDC122Q5T0U0 273 aa16.23■□□□□ 0.19
DDB1-216ENST00000539739 ALKBH5Q6P6C2 394 aaKnown RBP16.23■□□□□ 0.19
DDB1-216ENST00000539739 TMC5Q6UXY8 1006 aa16.23■□□□□ 0.19
DDB1-216ENST00000539739 GPRIN1Q7Z2K8 1008 aa16.23■□□□□ 0.19
DDB1-216ENST00000539739 PLCD3Q8N3E9 789 aa16.23■□□□□ 0.19
DDB1-216ENST00000539739 SCAMP5Q8TAC9 235 aa16.23■□□□□ 0.19
DDB1-216ENST00000539739 OLIG1Q8TAK6 271 aa16.23■□□□□ 0.19
DDB1-216ENST00000539739 PPM1EQ8WY54 764 aa16.23■□□□□ 0.19
DDB1-216ENST00000539739 SMG7Q92540 1137 aaKnown RBP16.23■□□□□ 0.19
DDB1-216ENST00000539739 C18orf8Q96DM3 657 aa16.23■□□□□ 0.19
DDB1-216ENST00000539739 SLITRK1Q96PX8 696 aa16.23■□□□□ 0.19
DDB1-216ENST00000539739 CNGB3Q9NQW8 809 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms