RNA–Protein interactions for RNA: ENST00000539548.6

CDH13-204, Transcript of cadherin 13, humanhuman

TSL 2

Gene CDH13, Length 2,199 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-204ENST00000539548 RTKN2Q8IZC4 609 aa10.09□□□□□ -0.79
CDH13-204ENST00000539548 TAB3Q8N5C8 712 aaPredicted RBP10.09□□□□□ -0.79
CDH13-204ENST00000539548 KCTD6Q8NC69 237 aa10.09□□□□□ -0.79
CDH13-204ENST00000539548 SCG3Q8WXD2 468 aaKnown RBP10.09□□□□□ -0.79
CDH13-204ENST00000539548 SLC7A3Q8WY07 619 aa10.09□□□□□ -0.79
CDH13-204ENST00000539548 PRR11Q96HE9 360 aaPredicted RBP10.09□□□□□ -0.79
CDH13-204ENST00000539548 CAMKK2Q96RR4 588 aa10.09□□□□□ -0.79
CDH13-204ENST00000539548 WDR35Q9P2L0 1181 aa10.09□□□□□ -0.79
CDH13-204ENST00000539548 AHCYL1O43865 530 aa10.09□□□□□ -0.79
CDH13-204ENST00000539548 MAGEC1O60732 1142 aa10.09□□□□□ -0.79
CDH13-204ENST00000539548 FESP07332 822 aa10.09□□□□□ -0.79
CDH13-204ENST00000539548 CD48P09326 243 aa10.09□□□□□ -0.79
CDH13-204ENST00000539548 MYL2P10916 166 aa10.09□□□□□ -0.79
CDH13-204ENST00000539548 HARSP12081 509 aaKnown RBP10.09□□□□□ -0.79
CDH13-204ENST00000539548 PSMC1P62191 440 aaKnown RBP10.09□□□□□ -0.79
CDH13-204ENST00000539548 BASP1P80723 227 aaKnown RBP10.09□□□□□ -0.79
CDH13-204ENST00000539548 MXRA7P84157 204 aa10.09□□□□□ -0.79
CDH13-204ENST00000539548 SP2Q02086 613 aa10.09□□□□□ -0.79
CDH13-204ENST00000539548 CDK18Q07002 472 aa10.09□□□□□ -0.79
CDH13-204ENST00000539548 AP1B1Q10567 949 aa10.09□□□□□ -0.79
CDH13-204ENST00000539548 TRPC3Q13507 836 aa10.09□□□□□ -0.79
CDH13-204ENST00000539548 KCNJ11Q14654 390 aa10.09□□□□□ -0.79
CDH13-204ENST00000539548 ACAP1Q15027 740 aa10.09□□□□□ -0.79
CDH13-204ENST00000539548 TTC39BQ5VTQ0 682 aaPredicted RBP10.09□□□□□ -0.79
CDH13-204ENST00000539548 SNRNP48Q6IEG0 339 aaKnown RBP10.09□□□□□ -0.79
CDH13-204ENST00000539548 TMEM154Q6P9G4 183 aa10.09□□□□□ -0.79
CDH13-204ENST00000539548 LRRC74BQ6ZQY2 392 aa10.09□□□□□ -0.79
CDH13-204ENST00000539548 TRIM42Q8IWZ5 723 aa10.09□□□□□ -0.79
CDH13-204ENST00000539548 ARHGAP24Q8N264 748 aa10.09□□□□□ -0.79
CDH13-204ENST00000539548 WDR60Q8WVS4 1066 aa10.09□□□□□ -0.79
CDH13-204ENST00000539548 TTC17Q96AE7 1141 aa10.09□□□□□ -0.79
CDH13-204ENST00000539548 TEPSINQ96N21 525 aa10.09□□□□□ -0.79
CDH13-204ENST00000539548 MTMR12Q9C0I1 747 aa10.09□□□□□ -0.79
CDH13-204ENST00000539548 VCXQ9H320 206 aa10.09□□□□□ -0.79
CDH13-204ENST00000539548 RSAD1Q9HA92 442 aa10.09□□□□□ -0.79
CDH13-204ENST00000539548 SDAD1Q9NVU7 687 aaKnown RBP eCLIP10.09□□□□□ -0.79
CDH13-204ENST00000539548 KCNK4Q9NYG8 393 aa10.09□□□□□ -0.79
CDH13-204ENST00000539548 ZNF212Q9UDV6 495 aa10.09□□□□□ -0.79
CDH13-204ENST00000539548 CYTH4Q9UIA0 394 aa10.09□□□□□ -0.79
CDH13-204ENST00000539548 ASB3Q9Y575 518 aa10.09□□□□□ -0.79
CDH13-204ENST00000539548 COL4A5P29400 1685 aa10.08□□□□□ -0.8
CDH13-204ENST00000539548 IGKV6D-21A0A0A0MT36 114 aa10.08□□□□□ -0.8
CDH13-204ENST00000539548 KBTBD13C9JR72 458 aa10.08□□□□□ -0.8
CDH13-204ENST00000539548 F8W8V4 182 aa10.08□□□□□ -0.8
CDH13-204ENST00000539548 CAPN9O14815 690 aa10.08□□□□□ -0.8
CDH13-204ENST00000539548 CHADO15335 359 aa10.08□□□□□ -0.8
CDH13-204ENST00000539548 MED7O43513 233 aa10.08□□□□□ -0.8
CDH13-204ENST00000539548 TBX10O75333 385 aa10.08□□□□□ -0.8
CDH13-204ENST00000539548 TOM1L1O75674 476 aa10.08□□□□□ -0.8
CDH13-204ENST00000539548 ENDOD1O94919 500 aa10.08□□□□□ -0.8
CDH13-204ENST00000539548 TRUB2O95900 331 aaKnown RBP10.08□□□□□ -0.8
CDH13-204ENST00000539548 C1QAP02745 245 aa10.08□□□□□ -0.8
CDH13-204ENST00000539548 PGM1P36871 562 aa10.08□□□□□ -0.8
CDH13-204ENST00000539548 PEX19P40855 299 aa10.08□□□□□ -0.8
CDH13-204ENST00000539548 ASPAP45381 313 aa10.08□□□□□ -0.8
CDH13-204ENST00000539548 TUBP50607 506 aa10.08□□□□□ -0.8
CDH13-204ENST00000539548 SESN3P58005 492 aa10.08□□□□□ -0.8
CDH13-204ENST00000539548 YWHAGP61981 247 aaKnown RBP eCLIP10.08□□□□□ -0.8
CDH13-204ENST00000539548 CAPSQ13938 189 aa10.08□□□□□ -0.8
CDH13-204ENST00000539548 TARBP2Q15633 366 aaKnown RBP10.08□□□□□ -0.8
CDH13-204ENST00000539548 C11orf91Q3C1V1 193 aa10.08□□□□□ -0.8
CDH13-204ENST00000539548 SLC26A11Q86WA9 606 aa10.08□□□□□ -0.8
CDH13-204ENST00000539548 TMPRSS6Q8IU80 811 aa10.08□□□□□ -0.8
CDH13-204ENST00000539548 SCYL3Q8IZE3 742 aa10.08□□□□□ -0.8
CDH13-204ENST00000539548 SPATA18Q8TC71 538 aa10.08□□□□□ -0.8
CDH13-204ENST00000539548 APBB2Q92870 758 aa10.08□□□□□ -0.8
CDH13-204ENST00000539548 STMN2Q93045 179 aa10.08□□□□□ -0.8
CDH13-204ENST00000539548 C7orf26Q96N11 449 aa10.08□□□□□ -0.8
CDH13-204ENST00000539548 FRMD8Q9BZ67 464 aaPredicted RBP10.08□□□□□ -0.8
CDH13-204ENST00000539548 MAF1Q9H063 256 aa10.08□□□□□ -0.8
CDH13-204ENST00000539548 ZNF180Q9UJW8 692 aa10.08□□□□□ -0.8
CDH13-204ENST00000539548 ADAMTS5Q9UNA0 930 aa10.08□□□□□ -0.8
CDH13-204ENST00000539548 FAM237BA0A1B0GVD1 139 aa10.08□□□□□ -0.8
CDH13-204ENST00000539548 SPDYE5A6NIY4 337 aa10.08□□□□□ -0.8
CDH13-204ENST00000539548 TTLL13PA6NNM8 815 aa10.08□□□□□ -0.8
CDH13-204ENST00000539548 CAPN14A8MX76 684 aa10.08□□□□□ -0.8
CDH13-204ENST00000539548 COPEO14579 308 aa10.08□□□□□ -0.8
CDH13-204ENST00000539548 TRDMT1O14717 391 aaKnown RBP10.08□□□□□ -0.8
CDH13-204ENST00000539548 OGTO15294 1046 aa10.08□□□□□ -0.8
CDH13-204ENST00000539548 MSCO60682 206 aa10.08□□□□□ -0.8
CDH13-204ENST00000539548 SNRPAP09012 282 aaKnown RBP10.08□□□□□ -0.8
CDH13-204ENST00000539548 SP100P23497 879 aaPredicted RBP10.08□□□□□ -0.8
CDH13-204ENST00000539548 MIPP30301 263 aa10.08□□□□□ -0.8
CDH13-204ENST00000539548 ICAM3P32942 547 aa10.08□□□□□ -0.8
CDH13-204ENST00000539548 EFNA5P52803 228 aa10.08□□□□□ -0.8
CDH13-204ENST00000539548 ROR1Q01973 937 aa10.08□□□□□ -0.8
CDH13-204ENST00000539548 MTM1Q13496 603 aa10.08□□□□□ -0.8
CDH13-204ENST00000539548 OR52E8Q6IFG1 317 aa10.08□□□□□ -0.8
CDH13-204ENST00000539548 DARS2Q6PI48 645 aaKnown RBP10.08□□□□□ -0.8
CDH13-204ENST00000539548 ZBTB33Q86T24 672 aa10.08□□□□□ -0.8
CDH13-204ENST00000539548 XYLT1Q86Y38 959 aa10.08□□□□□ -0.8
CDH13-204ENST00000539548 SLC4A11Q8NBS3 891 aa10.08□□□□□ -0.8
CDH13-204ENST00000539548 PPFIBP2Q8ND30 876 aa10.08□□□□□ -0.8
CDH13-204ENST00000539548 CCDC110Q8TBZ0 833 aa10.08□□□□□ -0.8
CDH13-204ENST00000539548 ZNF526Q8TF50 670 aaPredicted RBP10.08□□□□□ -0.8
CDH13-204ENST00000539548 SRPK1Q96SB4 655 aaKnown RBP10.08□□□□□ -0.8
CDH13-204ENST00000539548 XYLT2Q9H1B5 865 aa10.08□□□□□ -0.8
CDH13-204ENST00000539548 ARHGEF4Q9NR80 690 aa10.08□□□□□ -0.8
CDH13-204ENST00000539548 NRBP2Q9NSY0 501 aa10.08□□□□□ -0.8
CDH13-204ENST00000539548 TJP2Q9UDY2 1190 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms