RNA–Protein interactions for RNA: ENST00000539097.2

HIF1A-204, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-204ENST00000539097 VWC2LB2RUY7 222 aa1.23□□□□□ -2.21
HIF1A-204ENST00000539097 H7C4K7 107 aa1.23□□□□□ -2.21
HIF1A-204ENST00000539097 M0QYT0 321 aa1.23□□□□□ -2.21
HIF1A-204ENST00000539097 M0QZQ0 153 aa1.23□□□□□ -2.21
HIF1A-204ENST00000539097 FFAR2O15552 330 aa1.23□□□□□ -2.21
HIF1A-204ENST00000539097 SLC26A4O43511 780 aa1.23□□□□□ -2.21
HIF1A-204ENST00000539097 GPR32O75388 356 aa1.23□□□□□ -2.21
HIF1A-204ENST00000539097 ALDH1A2O94788 518 aa1.23□□□□□ -2.21
HIF1A-204ENST00000539097 PLATP00750 562 aa1.23□□□□□ -2.21
HIF1A-204ENST00000539097 CD4P01730 458 aa1.23□□□□□ -2.21
HIF1A-204ENST00000539097 TK1P04183 234 aa1.23□□□□□ -2.21
HIF1A-204ENST00000539097 BRAFP15056 766 aa1.23□□□□□ -2.21
HIF1A-204ENST00000539097 PECAM1P16284 738 aaPredicted RBP1.23□□□□□ -2.21
HIF1A-204ENST00000539097 FBLP22087 321 aaKnown RBP1.23□□□□□ -2.21
HIF1A-204ENST00000539097 ACRV1P26436 265 aa1.23□□□□□ -2.21
HIF1A-204ENST00000539097 MST1P26927 711 aa1.23□□□□□ -2.21
HIF1A-204ENST00000539097 BSGP35613 385 aa1.23□□□□□ -2.21
HIF1A-204ENST00000539097 SLC11A2P49281 568 aa1.23□□□□□ -2.21
HIF1A-204ENST00000539097 BCAT1P54687 386 aa1.23□□□□□ -2.21
HIF1A-204ENST00000539097 NR1H2P55055 460 aa1.23□□□□□ -2.21
HIF1A-204ENST00000539097 UCP3P55916 312 aa1.23□□□□□ -2.21
HIF1A-204ENST00000539097 ACTR2P61160 394 aa1.23□□□□□ -2.21
HIF1A-204ENST00000539097 NOMO3P69849 1222 aa1.23□□□□□ -2.21
HIF1A-204ENST00000539097 PUM3Q15397 648 aaKnown RBP1.23□□□□□ -2.21
HIF1A-204ENST00000539097 PRICKLE4Q2TBC4 344 aa1.23□□□□□ -2.21
HIF1A-204ENST00000539097 FAM133BQ5BKY9 247 aaKnown RBP1.23□□□□□ -2.21
HIF1A-204ENST00000539097 NOMO2Q5JPE7 1267 aa1.23□□□□□ -2.21
HIF1A-204ENST00000539097 KHDC1LQ5JSQ8 128 aa1.23□□□□□ -2.21
HIF1A-204ENST00000539097 TMTC4Q5T4D3 741 aa1.23□□□□□ -2.21
HIF1A-204ENST00000539097 SPTY2D1Q68D10 685 aaPredicted RBP1.23□□□□□ -2.21
HIF1A-204ENST00000539097 DENND1BQ6P3S1 775 aa1.23□□□□□ -2.21
HIF1A-204ENST00000539097 PLBD1Q6P4A8 553 aa1.23□□□□□ -2.21
HIF1A-204ENST00000539097 KIAA1324Q6UXG2 1013 aaKnown RBP1.23□□□□□ -2.21
HIF1A-204ENST00000539097 ZNF365Q70YC5 407 aa1.23□□□□□ -2.21
HIF1A-204ENST00000539097 PRPF39Q86UA1 669 aaKnown RBP1.23□□□□□ -2.21
HIF1A-204ENST00000539097 SFTPA1Q8IWL2 248 aa1.23□□□□□ -2.21
HIF1A-204ENST00000539097 ZFPM1Q8IX07 1006 aa1.23□□□□□ -2.21
HIF1A-204ENST00000539097 TMTC2Q8N394 836 aa1.23□□□□□ -2.21
HIF1A-204ENST00000539097 TBC1D5Q92609 795 aa1.23□□□□□ -2.21
HIF1A-204ENST00000539097 CLMNQ96JQ2 1002 aa1.23□□□□□ -2.21
HIF1A-204ENST00000539097 WWC2-AS2Q96NR7 200 aa1.23□□□□□ -2.21
HIF1A-204ENST00000539097 GNRHR2Q96P88 292 aa1.23□□□□□ -2.21
HIF1A-204ENST00000539097 MAP7D2Q96T17 732 aa1.23□□□□□ -2.21
HIF1A-204ENST00000539097 TTPALQ9BTX7 342 aa1.23□□□□□ -2.21
HIF1A-204ENST00000539097 ALG8Q9BVK2 526 aa1.23□□□□□ -2.21
HIF1A-204ENST00000539097 USP44Q9H0E7 712 aa1.23□□□□□ -2.21
HIF1A-204ENST00000539097 MEGF9Q9H1U4 602 aa1.23□□□□□ -2.21
HIF1A-204ENST00000539097 NOD2Q9HC29 1040 aa1.23□□□□□ -2.21
HIF1A-204ENST00000539097 SAYSD1Q9NPB0 183 aa1.23□□□□□ -2.21
HIF1A-204ENST00000539097 SACM1LQ9NTJ5 587 aa1.23□□□□□ -2.21
HIF1A-204ENST00000539097 LMBRD1Q9NUN5 540 aa1.23□□□□□ -2.21
HIF1A-204ENST00000539097 ZSCAN32Q9NX65 697 aa1.23□□□□□ -2.21
HIF1A-204ENST00000539097 TRMT1Q9NXH9 659 aaKnown RBP1.23□□□□□ -2.21
HIF1A-204ENST00000539097 FAM184BQ9ULE4 1060 aa1.23□□□□□ -2.21
HIF1A-204ENST00000539097 EXO1Q9UQ84 846 aaKnown RBP1.23□□□□□ -2.21
HIF1A-204ENST00000539097 RIMBP3CA6NJZ7 1639 aa1.22□□□□□ -2.21
HIF1A-204ENST00000539097 RIMBP3BA6NNM3 1639 aa1.22□□□□□ -2.21
HIF1A-204ENST00000539097 RIMBP3Q9UFD9 1639 aa1.22□□□□□ -2.21
HIF1A-204ENST00000539097 A0A1W2PQJ5 194 aa1.22□□□□□ -2.21
HIF1A-204ENST00000539097 CXorf49A8MYA2 514 aaPredicted RBP1.22□□□□□ -2.21
HIF1A-204ENST00000539097 ETV2O00321 342 aaPredicted RBP1.22□□□□□ -2.21
HIF1A-204ENST00000539097 WNT9BO14905 357 aa1.22□□□□□ -2.21
HIF1A-204ENST00000539097 PCDH17O14917 1159 aa1.22□□□□□ -2.21
HIF1A-204ENST00000539097 VPS4BO75351 444 aa1.22□□□□□ -2.21
HIF1A-204ENST00000539097 TULP3O75386 442 aa1.22□□□□□ -2.21
HIF1A-204ENST00000539097 SKAP2O75563 359 aaPredicted RBP1.22□□□□□ -2.21
HIF1A-204ENST00000539097 GJB3O75712 270 aa1.22□□□□□ -2.21
HIF1A-204ENST00000539097 HMGCRP04035 888 aa1.22□□□□□ -2.21
HIF1A-204ENST00000539097 CSTBP04080 98 aaKnown RBP1.22□□□□□ -2.21
HIF1A-204ENST00000539097 FCER1AP12319 257 aa1.22□□□□□ -2.21
HIF1A-204ENST00000539097 TNFAIP3P21580 790 aa1.22□□□□□ -2.21
HIF1A-204ENST00000539097 DUSP1P28562 367 aa1.22□□□□□ -2.21
HIF1A-204ENST00000539097 SLC7A1P30825 629 aa1.22□□□□□ -2.21
HIF1A-204ENST00000539097 CYP2C18P33260 490 aa1.22□□□□□ -2.21
HIF1A-204ENST00000539097 RASSF2P50749 326 aa1.22□□□□□ -2.21
HIF1A-204ENST00000539097 ANXA11P50995 505 aaKnown RBP1.22□□□□□ -2.21
HIF1A-204ENST00000539097 PSMC1P62191 440 aaKnown RBP1.22□□□□□ -2.21
HIF1A-204ENST00000539097 ADAM17P78536 824 aa1.22□□□□□ -2.21
HIF1A-204ENST00000539097 FAM189BP81408 668 aa1.22□□□□□ -2.21
HIF1A-204ENST00000539097 KHDRBS1Q07666 443 aaKnown RBP eCLIP1.22□□□□□ -2.21
HIF1A-204ENST00000539097 NSUN2Q08J23 767 aaKnown RBP eCLIP1.22□□□□□ -2.21
HIF1A-204ENST00000539097 SLC13A2Q13183 592 aa1.22□□□□□ -2.21
HIF1A-204ENST00000539097 ADCK5Q3MIX3 580 aa1.22□□□□□ -2.21
HIF1A-204ENST00000539097 EEF1AKMT2Q5JPI9 291 aaKnown RBP1.22□□□□□ -2.21
HIF1A-204ENST00000539097 VPS53Q5VIR6 699 aa1.22□□□□□ -2.21
HIF1A-204ENST00000539097 SULT6B1Q6IMI4 303 aa1.22□□□□□ -2.21
HIF1A-204ENST00000539097 CLEC17AQ6ZS10 378 aa1.22□□□□□ -2.21
HIF1A-204ENST00000539097 KIAA0408Q6ZU52 694 aa1.22□□□□□ -2.21
HIF1A-204ENST00000539097 ARHGEF19Q8IW93 802 aa1.22□□□□□ -2.21
HIF1A-204ENST00000539097 CARFQ8N187 725 aa1.22□□□□□ -2.21
HIF1A-204ENST00000539097 SLC15A4Q8N697 577 aa1.22□□□□□ -2.21
HIF1A-204ENST00000539097 RBM15BQ8NDT2 890 aaKnown RBP1.22□□□□□ -2.21
HIF1A-204ENST00000539097 GLMPQ8WWB7 406 aa1.22□□□□□ -2.21
HIF1A-204ENST00000539097 HERVK_113Q902F9 699 aa1.22□□□□□ -2.21
HIF1A-204ENST00000539097 LTV1Q96GA3 475 aaPredicted RBP1.22□□□□□ -2.21
HIF1A-204ENST00000539097 KLHL32Q96NJ5 620 aa1.22□□□□□ -2.21
HIF1A-204ENST00000539097 DACH2Q96NX9 599 aa1.22□□□□□ -2.21
HIF1A-204ENST00000539097 RMDN3Q96TC7 470 aa1.22□□□□□ -2.21
HIF1A-204ENST00000539097 EGFL8Q99944 293 aa1.22□□□□□ -2.21
HIF1A-204ENST00000539097 NDC1Q9BTX1 674 aa1.22□□□□□ -2.21
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms