RNA–Protein interactions for RNA: ENST00000538886.5

GGA3-202, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene GGA3, Length 3,766 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-202ENST00000538886 HOXC8P31273 242 aa9.22□□□□□ -0.93
GGA3-202ENST00000538886 SOX5P35711 763 aa9.22□□□□□ -0.93
GGA3-202ENST00000538886 NKX3-2P78367 333 aa9.22□□□□□ -0.93
GGA3-202ENST00000538886 EHHADHQ08426 723 aa9.22□□□□□ -0.93
GGA3-202ENST00000538886 ZCWPW2Q504Y3 356 aa9.22□□□□□ -0.93
GGA3-202ENST00000538886 TPGS1Q6ZTW0 290 aa9.22□□□□□ -0.93
GGA3-202ENST00000538886 IRF2BP1Q8IU81 584 aa9.22□□□□□ -0.93
GGA3-202ENST00000538886 GSTCDQ8NEC7 633 aa9.22□□□□□ -0.93
GGA3-202ENST00000538886 MAFAQ8NHW3 353 aaPredicted RBP9.22□□□□□ -0.93
GGA3-202ENST00000538886 SLC20A1Q8WUM9 679 aa9.22□□□□□ -0.93
GGA3-202ENST00000538886 ZNF606Q8WXB4 792 aa9.22□□□□□ -0.93
GGA3-202ENST00000538886 RSRC1Q96IZ7 334 aaKnown RBP9.22□□□□□ -0.93
GGA3-202ENST00000538886 SUSD3Q96L08 255 aa9.22□□□□□ -0.93
GGA3-202ENST00000538886 DMAP1Q9NPF5 467 aaPredicted RBP9.22□□□□□ -0.93
GGA3-202ENST00000538886 DMAC2Q9NW81 257 aa9.22□□□□□ -0.93
GGA3-202ENST00000538886 ETAA1Q9NY74 926 aa9.22□□□□□ -0.93
GGA3-202ENST00000538886 PSD3Q9NYI0 1048 aa9.22□□□□□ -0.93
GGA3-202ENST00000538886 EP300Q09472 2414 aaPredicted RBP9.22□□□□□ -0.93
GGA3-202ENST00000538886 TADA3O75528 432 aa9.22□□□□□ -0.93
GGA3-202ENST00000538886 RNF8O76064 485 aa9.22□□□□□ -0.93
GGA3-202ENST00000538886 GGCXP38435 758 aa9.22□□□□□ -0.93
GGA3-202ENST00000538886 RANBP1P43487 201 aa9.22□□□□□ -0.93
GGA3-202ENST00000538886 GFPT1Q06210 699 aaPredicted RBP9.22□□□□□ -0.93
GGA3-202ENST00000538886 TAF10Q12962 218 aa9.22□□□□□ -0.93
GGA3-202ENST00000538886 NCAPHQ15003 741 aa9.22□□□□□ -0.93
GGA3-202ENST00000538886 ADGRD2Q7Z7M1 963 aa9.22□□□□□ -0.93
GGA3-202ENST00000538886 ITIH5Q86UX2 942 aa9.22□□□□□ -0.93
GGA3-202ENST00000538886 MRPL43Q8N983 215 aaKnown RBP9.22□□□□□ -0.93
GGA3-202ENST00000538886 TRAF3IP1Q8TDR0 691 aaPredicted RBP9.22□□□□□ -0.93
GGA3-202ENST00000538886 C18orf8Q96DM3 657 aa9.22□□□□□ -0.93
GGA3-202ENST00000538886 TMEM175Q9BSA9 504 aa9.22□□□□□ -0.93
GGA3-202ENST00000538886 B3GNT5Q9BYG0 378 aa9.22□□□□□ -0.93
GGA3-202ENST00000538886 STK33Q9BYT3 514 aa9.22□□□□□ -0.93
GGA3-202ENST00000538886 PRM3Q9NNZ6 103 aa9.22□□□□□ -0.93
GGA3-202ENST00000538886 PLK2Q9NYY3 685 aa9.22□□□□□ -0.93
GGA3-202ENST00000538886 PCDHB8Q9UN66 801 aa9.22□□□□□ -0.93
GGA3-202ENST00000538886 HYOU1Q9Y4L1 999 aa9.22□□□□□ -0.93
GGA3-202ENST00000538886 PRUNE2Q8WUY3 3088 aa9.22□□□□□ -0.93
GGA3-202ENST00000538886 EPHB6O15197 1021 aa9.22□□□□□ -0.93
GGA3-202ENST00000538886 FTLP02792 175 aaPredicted RBP9.22□□□□□ -0.93
GGA3-202ENST00000538886 PROZP22891 400 aa9.22□□□□□ -0.93
GGA3-202ENST00000538886 FXR1P51114 621 aaKnown RBP eCLIP9.22□□□□□ -0.93
GGA3-202ENST00000538886 FAM189BP81408 668 aa9.22□□□□□ -0.93
GGA3-202ENST00000538886 GPR158Q5T848 1215 aa9.22□□□□□ -0.93
GGA3-202ENST00000538886 ALKBH5Q6P6C2 394 aaKnown RBP9.22□□□□□ -0.93
GGA3-202ENST00000538886 PIGZQ86VD9 579 aa9.22□□□□□ -0.93
GGA3-202ENST00000538886 EMC1Q8N766 993 aa9.22□□□□□ -0.93
GGA3-202ENST00000538886 ZNF461Q8TAF7 563 aa9.22□□□□□ -0.93
GGA3-202ENST00000538886 BCL7CQ8WUZ0 217 aaPredicted RBP9.22□□□□□ -0.93
GGA3-202ENST00000538886 SMARCD1Q96GM5 515 aa9.22□□□□□ -0.93
GGA3-202ENST00000538886 CCDC114Q96M63 670 aa9.22□□□□□ -0.93
GGA3-202ENST00000538886 MED15Q96RN5 788 aa9.22□□□□□ -0.93
GGA3-202ENST00000538886 TWNKQ96RR1 684 aa9.22□□□□□ -0.93
GGA3-202ENST00000538886 HCFC1R1Q9NWW0 138 aa9.22□□□□□ -0.93
GGA3-202ENST00000538886 LIMA1Q9UHB6 759 aaKnown RBP9.22□□□□□ -0.93
GGA3-202ENST00000538886 CDH9Q9ULB4 789 aa9.22□□□□□ -0.93
GGA3-202ENST00000538886 STXBP5LQ9Y2K9 1186 aa9.22□□□□□ -0.93
GGA3-202ENST00000538886 SLC12A8A0AV02 714 aa9.21□□□□□ -0.93
GGA3-202ENST00000538886 OR6C75A6NL08 312 aa9.21□□□□□ -0.93
GGA3-202ENST00000538886 SYN3O14994 580 aa9.21□□□□□ -0.93
GGA3-202ENST00000538886 INPPL1O15357 1258 aa9.21□□□□□ -0.93
GGA3-202ENST00000538886 GJB6O95452 261 aa9.21□□□□□ -0.93
GGA3-202ENST00000538886 PLEKP08567 350 aaPredicted RBP9.21□□□□□ -0.93
GGA3-202ENST00000538886 SNX1Q13596 522 aa9.21□□□□□ -0.93
GGA3-202ENST00000538886 ENOSF1Q7L5Y1 443 aa9.21□□□□□ -0.93
GGA3-202ENST00000538886 UBE2Q1Q7Z7E8 422 aa9.21□□□□□ -0.93
GGA3-202ENST00000538886 OSTM1Q86WC4 334 aa9.21□□□□□ -0.93
GGA3-202ENST00000538886 ULBP1Q9BZM6 244 aa9.21□□□□□ -0.93
GGA3-202ENST00000538886 ELOVL4Q9GZR5 314 aa9.21□□□□□ -0.93
GGA3-202ENST00000538886 ZWILCHQ9H900 591 aa9.21□□□□□ -0.93
GGA3-202ENST00000538886 CEP72Q9P209 647 aa9.21□□□□□ -0.93
GGA3-202ENST00000538886 TYW5A2RUC4 315 aaKnown RBP9.21□□□□□ -0.94
GGA3-202ENST00000538886 TRDMT1O14717 391 aaKnown RBP9.21□□□□□ -0.94
GGA3-202ENST00000538886 CREB3O43889 395 aa9.21□□□□□ -0.94
GGA3-202ENST00000538886 TSPAN3O60637 253 aa9.21□□□□□ -0.94
GGA3-202ENST00000538886 RNF40O75150 1001 aa9.21□□□□□ -0.94
GGA3-202ENST00000538886 CTSAP10619 480 aa9.21□□□□□ -0.94
GGA3-202ENST00000538886 PPM1FP49593 454 aaPredicted RBP9.21□□□□□ -0.94
GGA3-202ENST00000538886 CCNHP51946 323 aaPredicted RBP9.21□□□□□ -0.94
GGA3-202ENST00000538886 ZBED6P86452 979 aa9.21□□□□□ -0.94
GGA3-202ENST00000538886 INTS6LQ5JSJ4 861 aaKnown RBP9.21□□□□□ -0.94
GGA3-202ENST00000538886 TXNDC8Q6A555 127 aa9.21□□□□□ -0.94
GGA3-202ENST00000538886 PDXDC1Q6P996 788 aa9.21□□□□□ -0.94
GGA3-202ENST00000538886 DNAJB7Q7Z6W7 309 aaPredicted RBP9.21□□□□□ -0.94
GGA3-202ENST00000538886 C12orf56Q8IXR9 622 aa9.21□□□□□ -0.94
GGA3-202ENST00000538886 PGBD3Q8N328 593 aa9.21□□□□□ -0.94
GGA3-202ENST00000538886 TTC39CQ8N584 583 aa9.21□□□□□ -0.94
GGA3-202ENST00000538886 OR10T2Q8NGX3 314 aa9.21□□□□□ -0.94
GGA3-202ENST00000538886 TAF4BQ92750 862 aa9.21□□□□□ -0.94
GGA3-202ENST00000538886 HLA-CQ95604 372 aa9.21□□□□□ -0.94
GGA3-202ENST00000538886 FAM81BQ96LP2 452 aa9.21□□□□□ -0.94
GGA3-202ENST00000538886 FBXL18Q96ME1 805 aa9.21□□□□□ -0.94
GGA3-202ENST00000538886 CYP2S1Q96SQ9 504 aa9.21□□□□□ -0.94
GGA3-202ENST00000538886 SPON2Q9BUD6 331 aa9.21□□□□□ -0.94
GGA3-202ENST00000538886 FUT8Q9BYC5 575 aa9.21□□□□□ -0.94
GGA3-202ENST00000538886 CYP3A43Q9HB55 503 aa9.21□□□□□ -0.94
GGA3-202ENST00000538886 WDR70Q9NW82 654 aa9.21□□□□□ -0.94
GGA3-202ENST00000538886 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP9.21□□□□□ -0.944e-11■■■■□ 24.4
GGA3-202ENST00000538886 CNOT8Q9UFF9 292 aaKnown RBP9.21□□□□□ -0.94
GGA3-202ENST00000538886 DERAQ9Y315 318 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms