RNA–Protein interactions for RNA: ENST00000538456.3

SMARCA4-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 3

Gene SMARCA4, Length 738 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-206ENST00000538456 PCIF1Q9H4Z3 704 aa14.97□□□□□ -0.01
SMARCA4-206ENST00000538456 SLC32A1Q9H598 525 aa14.97□□□□□ -0.01
SMARCA4-206ENST00000538456 CRTAC1Q9NQ79 661 aa14.97□□□□□ -0.01
SMARCA4-206ENST00000538456 FSCN3Q9NQT6 498 aa14.97□□□□□ -0.01
SMARCA4-206ENST00000538456 MBD1Q9UIS9 605 aaPredicted RBP14.97□□□□□ -0.01
SMARCA4-206ENST00000538456 R3HCC1Q9Y3T6 440 aaKnown RBP14.97□□□□□ -0.01
SMARCA4-206ENST00000538456 CPQQ9Y646 472 aa14.97□□□□□ -0.01
SMARCA4-206ENST00000538456 PTPRJQ12913 1337 aa14.96□□□□□ -0.01
SMARCA4-206ENST00000538456 TCRBV21S2A2A0A5A6 115 aa14.96□□□□□ -0.01
SMARCA4-206ENST00000538456 TNFRSF10BO14763 440 aa14.96□□□□□ -0.01
SMARCA4-206ENST00000538456 KAT7O95251 611 aa14.96□□□□□ -0.01
SMARCA4-206ENST00000538456 BMP15O95972 392 aa14.96□□□□□ -0.01
SMARCA4-206ENST00000538456 APODP05090 189 aa14.96□□□□□ -0.01
SMARCA4-206ENST00000538456 PDGFRBP09619 1106 aa14.96□□□□□ -0.01
SMARCA4-206ENST00000538456 ITPKAP23677 461 aa14.96□□□□□ -0.01
SMARCA4-206ENST00000538456 MYO1EQ12965 1108 aa14.96□□□□□ -0.01
SMARCA4-206ENST00000538456 SF3A1Q15459 793 aaKnown RBP14.96□□□□□ -0.01
SMARCA4-206ENST00000538456 LYSMD4Q5XG99 296 aa14.96□□□□□ -0.01
SMARCA4-206ENST00000538456 VSTM1Q6UX27 236 aa14.96□□□□□ -0.01
SMARCA4-206ENST00000538456 ADGRG2Q8IZP9 1017 aa14.96□□□□□ -0.01
SMARCA4-206ENST00000538456 NBEAQ8NFP9 2946 aa14.96□□□□□ -0.01
SMARCA4-206ENST00000538456 KBTBD7Q8WVZ9 684 aa14.96□□□□□ -0.01
SMARCA4-206ENST00000538456 HPDLQ96IR7 371 aa14.96□□□□□ -0.01
SMARCA4-206ENST00000538456 PNKPQ96T60 521 aa14.96□□□□□ -0.01
SMARCA4-206ENST00000538456 GTPBP2Q9BX10 602 aaKnown RBP14.96□□□□□ -0.01
SMARCA4-206ENST00000538456 POLMQ9NP87 494 aaPredicted RBP14.96□□□□□ -0.01
SMARCA4-206ENST00000538456 PPP4R2Q9NY27 417 aa14.96□□□□□ -0.01
SMARCA4-206ENST00000538456 CFAP97Q9P2B7 532 aa14.96□□□□□ -0.01
SMARCA4-206ENST00000538456 SEL1LQ9UBV2 794 aa14.96□□□□□ -0.01
SMARCA4-206ENST00000538456 KLK13Q9UKR3 277 aa14.96□□□□□ -0.01
SMARCA4-206ENST00000538456 CDH9Q9ULB4 789 aa14.96□□□□□ -0.01
SMARCA4-206ENST00000538456 ZNF840PA6NDX5 716 aa14.95□□□□□ -0.02
SMARCA4-206ENST00000538456 LDHAP00338 332 aaKnown RBP14.95□□□□□ -0.02
SMARCA4-206ENST00000538456 CHRM1P11229 460 aaPredicted RBP14.95□□□□□ -0.02
SMARCA4-206ENST00000538456 ADH5P11766 374 aa14.95□□□□□ -0.02
SMARCA4-206ENST00000538456 GAP43P17677 238 aa14.95□□□□□ -0.02
SMARCA4-206ENST00000538456 GARTP22102 1010 aa14.95□□□□□ -0.02
SMARCA4-206ENST00000538456 SLC7A9P82251 487 aa14.95□□□□□ -0.02
SMARCA4-206ENST00000538456 RING1Q06587 406 aa14.95□□□□□ -0.02
SMARCA4-206ENST00000538456 IFRD2Q12894 506 aaPredicted RBP14.95□□□□□ -0.02
SMARCA4-206ENST00000538456 MDH1BQ5I0G3 518 aa14.95□□□□□ -0.02
SMARCA4-206ENST00000538456 EOGTQ5NDL2 527 aa14.95□□□□□ -0.02
SMARCA4-206ENST00000538456 DEFB119Q8N690 84 aa14.95□□□□□ -0.02
SMARCA4-206ENST00000538456 OR5B17Q8NGF7 314 aa14.95□□□□□ -0.02
SMARCA4-206ENST00000538456 PCED1BQ96HM7 432 aa14.95□□□□□ -0.02
SMARCA4-206ENST00000538456 ANKRD36BP1Q96IX9 119 aa14.95□□□□□ -0.02
SMARCA4-206ENST00000538456 TMX3Q96JJ7 454 aa14.95□□□□□ -0.02
SMARCA4-206ENST00000538456 MMS19Q96T76 1030 aa14.95□□□□□ -0.02
SMARCA4-206ENST00000538456 FGFBP2Q9BYJ0 223 aa14.95□□□□□ -0.02
SMARCA4-206ENST00000538456 ARHGEF4Q9NR80 690 aa14.95□□□□□ -0.02
SMARCA4-206ENST00000538456 NEUROG3Q9Y4Z2 214 aa14.95□□□□□ -0.02
SMARCA4-206ENST00000538456 F8VP50 259 aa14.94□□□□□ -0.02
SMARCA4-206ENST00000538456 SLC9A3R1O14745 358 aaPredicted RBP14.94□□□□□ -0.02
SMARCA4-206ENST00000538456 TRIM66O15016 1216 aa14.94□□□□□ -0.02
SMARCA4-206ENST00000538456 ADAM23O75077 832 aa14.94□□□□□ -0.02
SMARCA4-206ENST00000538456 ADH1CP00326 375 aa14.94□□□□□ -0.02
SMARCA4-206ENST00000538456 MBL2P11226 248 aaPredicted RBP14.94□□□□□ -0.02
SMARCA4-206ENST00000538456 IDEP14735 1019 aa14.94□□□□□ -0.02
SMARCA4-206ENST00000538456 PFKLP17858 780 aa14.94□□□□□ -0.02
SMARCA4-206ENST00000538456 KIR2DL1P43626 348 aaPredicted RBP14.94□□□□□ -0.02
SMARCA4-206ENST00000538456 ATXN3P54252 364 aaPredicted RBP14.94□□□□□ -0.02
SMARCA4-206ENST00000538456 ACAP1Q15027 740 aa14.94□□□□□ -0.02
SMARCA4-206ENST00000538456 MAPRE1Q15691 268 aaKnown RBP14.94□□□□□ -0.02
SMARCA4-206ENST00000538456 MAP7D1Q3KQU3 841 aa14.94□□□□□ -0.02
SMARCA4-206ENST00000538456 RHBDF2Q6PJF5 856 aa14.94□□□□□ -0.02
SMARCA4-206ENST00000538456 HS2ST1Q7LGA3 356 aa14.94□□□□□ -0.02
SMARCA4-206ENST00000538456 DNAJC19Q96DA6 116 aa14.94□□□□□ -0.02
SMARCA4-206ENST00000538456 TTLL2Q9BWV7 592 aa14.94□□□□□ -0.02
SMARCA4-206ENST00000538456 STK17AQ9UEE5 414 aa14.94□□□□□ -0.02
SMARCA4-206ENST00000538456 PILRBQ9UKJ0 227 aa14.94□□□□□ -0.02
SMARCA4-206ENST00000538456 LHX6Q9UPM6 363 aa14.94□□□□□ -0.02
SMARCA4-206ENST00000538456 PCDHB13Q9Y5F0 798 aa14.94□□□□□ -0.02
SMARCA4-206ENST00000538456 PCDH15Q96QU1 1955 aa14.93□□□□□ -0.02
SMARCA4-206ENST00000538456 OLFM2O95897 454 aa14.93□□□□□ -0.02
SMARCA4-206ENST00000538456 OAS1P00973 400 aaKnown RBP14.93□□□□□ -0.02
SMARCA4-206ENST00000538456 TNNC2P02585 160 aa14.93□□□□□ -0.02
SMARCA4-206ENST00000538456 EIF2DP41214 584 aaKnown RBP14.93□□□□□ -0.02
SMARCA4-206ENST00000538456 GRIA2P42262 883 aa14.93□□□□□ -0.02
SMARCA4-206ENST00000538456 CACNA2D1P54289 1103 aa14.93□□□□□ -0.02
SMARCA4-206ENST00000538456 RPL6Q02878 288 aaKnown RBP14.93□□□□□ -0.02
SMARCA4-206ENST00000538456 TAF10Q12962 218 aa14.93□□□□□ -0.02
SMARCA4-206ENST00000538456 SEMA3BQ13214 749 aa14.93□□□□□ -0.02
SMARCA4-206ENST00000538456 HSF5Q4G112 596 aaPredicted RBP14.93□□□□□ -0.02
SMARCA4-206ENST00000538456 SLC23A3Q6PIS1 610 aa14.93□□□□□ -0.02
SMARCA4-206ENST00000538456 SV2BQ7L1I2 683 aa14.93□□□□□ -0.02
SMARCA4-206ENST00000538456 DPH6Q7L8W6 267 aa14.93□□□□□ -0.02
SMARCA4-206ENST00000538456 PIP4P1Q86T03 277 aa14.93□□□□□ -0.02
SMARCA4-206ENST00000538456 GPD1LQ8N335 351 aa14.93□□□□□ -0.02
SMARCA4-206ENST00000538456 HDDC3Q8N4P3 179 aa14.93□□□□□ -0.02
SMARCA4-206ENST00000538456 OR2I1PQ8NGU4 316 aa14.93□□□□□ -0.02
SMARCA4-206ENST00000538456 MYCBPAPQ8TBZ2 947 aa14.93□□□□□ -0.02
SMARCA4-206ENST00000538456 INTS13Q9NVM9 706 aa14.93□□□□□ -0.02
SMARCA4-206ENST00000538456 EHD2Q9NZN4 543 aa14.93□□□□□ -0.02
SMARCA4-206ENST00000538456 CCDC39Q9UFE4 941 aa14.93□□□□□ -0.02
SMARCA4-206ENST00000538456 SMC3Q9UQE7 1217 aa14.93□□□□□ -0.02
SMARCA4-206ENST00000538456 MSRB2Q9Y3D2 182 aa14.93□□□□□ -0.02
SMARCA4-206ENST00000538456 LAMA5O15230 3695 aa14.93□□□□□ -0.02
SMARCA4-206ENST00000538456 ITPR1Q14643 2758 aa14.93□□□□□ -0.02
SMARCA4-206ENST00000538456 PALM2-AKAP2B1ALY0 433 aaPredicted RBP14.92□□□□□ -0.02
SMARCA4-206ENST00000538456 PRPF6O94906 941 aaKnown RBP14.92□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms