RNA–Protein interactions for RNA: ENST00000538136.1

MSH6-209, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 4,055 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-209ENST00000538136 KHSRPQ92945 711 aaKnown RBP eCLIP7.6□□□□□ -1.191e-14■■■■□ 22.5
MSH6-209ENST00000538136 SECISBP2LQ93073 1101 aaKnown RBP7.6□□□□□ -1.19
MSH6-209ENST00000538136 RNF31Q96EP0 1072 aa7.6□□□□□ -1.19
MSH6-209ENST00000538136 CFAP57Q96MR6 1250 aa7.6□□□□□ -1.19
MSH6-209ENST00000538136 BBS2Q9BXC9 721 aa7.6□□□□□ -1.19
MSH6-209ENST00000538136 ADAM33Q9BZ11 813 aa7.6□□□□□ -1.19
MSH6-209ENST00000538136 CRISPLD2Q9H0B8 497 aa7.6□□□□□ -1.19
MSH6-209ENST00000538136 PPANQ9NQ55 473 aaKnown RBP7.6□□□□□ -1.19
MSH6-209ENST00000538136 PIH1D1Q9NWS0 290 aaKnown RBP7.6□□□□□ -1.19
MSH6-209ENST00000538136 TAS2R14Q9NYV8 317 aa7.6□□□□□ -1.19
MSH6-209ENST00000538136 TTC7AQ9ULT0 858 aaPredicted RBP7.6□□□□□ -1.19
MSH6-209ENST00000538136 MYO18AQ92614 2054 aaKnown RBP7.6□□□□□ -1.19
MSH6-209ENST00000538136 QSER1Q2KHR3 1735 aa7.59□□□□□ -1.19
MSH6-209ENST00000538136 A0A087X0T9 212 aa7.59□□□□□ -1.19
MSH6-209ENST00000538136 DGKIO75912 1065 aa7.59□□□□□ -1.19
MSH6-209ENST00000538136 FAM228BP0C875 321 aa7.59□□□□□ -1.19
MSH6-209ENST00000538136 NEFHP12036 1026 aa7.59□□□□□ -1.19
MSH6-209ENST00000538136 CYP11B1P15538 503 aa7.59□□□□□ -1.19
MSH6-209ENST00000538136 MUTP22033 750 aa7.59□□□□□ -1.19
MSH6-209ENST00000538136 SOX9P48436 509 aa7.59□□□□□ -1.19
MSH6-209ENST00000538136 TNK2Q07912 1038 aa7.59□□□□□ -1.19
MSH6-209ENST00000538136 HABP4Q5JVS0 413 aaKnown RBP7.59□□□□□ -1.19
MSH6-209ENST00000538136 FAM35AQ86V20 835 aa7.59□□□□□ -1.19
MSH6-209ENST00000538136 EFHBQ8N7U6 833 aa7.59□□□□□ -1.19
MSH6-209ENST00000538136 OR10T2Q8NGX3 314 aa7.59□□□□□ -1.19
MSH6-209ENST00000538136 IFT81Q8WYA0 676 aa7.59□□□□□ -1.19
MSH6-209ENST00000538136 NUP58Q9BVL2 599 aa7.59□□□□□ -1.19
MSH6-209ENST00000538136 TRIM7Q9C029 511 aa7.59□□□□□ -1.19
MSH6-209ENST00000538136 ELOVL4Q9GZR5 314 aa7.59□□□□□ -1.19
MSH6-209ENST00000538136 CCSER2Q9H7U1 834 aa7.59□□□□□ -1.19
MSH6-209ENST00000538136 C10orf88Q9H8K7 445 aa7.59□□□□□ -1.19
MSH6-209ENST00000538136 UBP1Q9NZI7 540 aa7.59□□□□□ -1.19
MSH6-209ENST00000538136 ZNF148Q9UQR1 794 aa7.59□□□□□ -1.19
MSH6-209ENST00000538136 CPQQ9Y646 472 aa7.59□□□□□ -1.19
MSH6-209ENST00000538136 MYH7BA7E2Y1 1941 aa7.59□□□□□ -1.19
MSH6-209ENST00000538136 A0A1W2PQH9 124 aa7.59□□□□□ -1.19
MSH6-209ENST00000538136 NNMTP40261 264 aa7.59□□□□□ -1.19
MSH6-209ENST00000538136 KRT83P78385 493 aa7.59□□□□□ -1.19
MSH6-209ENST00000538136 UAP1Q16222 522 aaPredicted RBP7.59□□□□□ -1.19
MSH6-209ENST00000538136 LRRC73Q5JTD7 316 aa7.59□□□□□ -1.19
MSH6-209ENST00000538136 PRR23BQ6ZRT6 265 aa7.59□□□□□ -1.19
MSH6-209ENST00000538136 ARID3BQ8IVW6 561 aaPredicted RBP7.59□□□□□ -1.19
MSH6-209ENST00000538136 GRIN3AQ8TCU5 1115 aa7.59□□□□□ -1.19
MSH6-209ENST00000538136 AGPAT1Q99943 283 aa7.59□□□□□ -1.19
MSH6-209ENST00000538136 WDCPQ9H6R7 721 aa7.59□□□□□ -1.19
MSH6-209ENST00000538136 SMARCAL1Q9NZC9 954 aa7.59□□□□□ -1.19
MSH6-209ENST00000538136 MPP6Q9NZW5 540 aa7.59□□□□□ -1.19
MSH6-209ENST00000538136 VPS28Q9UK41 221 aa7.59□□□□□ -1.19
MSH6-209ENST00000538136 STAP1Q9ULZ2 295 aa7.59□□□□□ -1.19
MSH6-209ENST00000538136 NAALADL1Q9UQQ1 740 aa7.59□□□□□ -1.19
MSH6-209ENST00000538136 COL6A3P12111 3177 aa7.59□□□□□ -1.19
MSH6-209ENST00000538136 SOX1O00570 391 aaPredicted RBP7.59□□□□□ -1.19
MSH6-209ENST00000538136 ZSCAN12O43309 604 aa7.59□□□□□ -1.19
MSH6-209ENST00000538136 RARGP13631 454 aa7.59□□□□□ -1.19
MSH6-209ENST00000538136 CASQ1P31415 396 aa7.59□□□□□ -1.19
MSH6-209ENST00000538136 SLC5A3P53794 718 aa7.59□□□□□ -1.19
MSH6-209ENST00000538136 GSDMDP57764 484 aa7.59□□□□□ -1.19
MSH6-209ENST00000538136 DLX2Q07687 328 aaPredicted RBP7.59□□□□□ -1.19
MSH6-209ENST00000538136 PPP1R7Q15435 360 aa7.59□□□□□ -1.19
MSH6-209ENST00000538136 CRELD2Q6UXH1 353 aaPredicted RBP7.59□□□□□ -1.19
MSH6-209ENST00000538136 LRRC55Q6ZSA7 311 aa7.59□□□□□ -1.19
MSH6-209ENST00000538136 TFAP2BQ92481 460 aa7.59□□□□□ -1.19
MSH6-209ENST00000538136 HLA-CQ95604 372 aa7.59□□□□□ -1.19
MSH6-209ENST00000538136 TRAF3IP3Q9Y228 551 aa7.59□□□□□ -1.19
MSH6-209ENST00000538136 YIPF1Q9Y548 306 aa7.59□□□□□ -1.19
MSH6-209ENST00000538136 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP7.59□□□□□ -1.19
MSH6-209ENST00000538136 DOCK8Q8NF50 2099 aa7.59□□□□□ -1.19
MSH6-209ENST00000538136 RHOXF2BP0C7M4 288 aa7.58□□□□□ -1.2
MSH6-209ENST00000538136 ZBED6P86452 979 aa7.58□□□□□ -1.2
MSH6-209ENST00000538136 SF3A3Q12874 501 aaKnown RBP eCLIP7.58□□□□□ -1.2
MSH6-209ENST00000538136 IQCB1Q15051 598 aa7.58□□□□□ -1.2
MSH6-209ENST00000538136 HADHQ16836 314 aaKnown RBP7.58□□□□□ -1.2
MSH6-209ENST00000538136 TMEM31Q5JXX7 168 aa7.58□□□□□ -1.2
MSH6-209ENST00000538136 CCDC70Q6NSX1 233 aa7.58□□□□□ -1.2
MSH6-209ENST00000538136 LRRTM3Q86VH5 581 aa7.58□□□□□ -1.2
MSH6-209ENST00000538136 CD302Q8IX05 232 aa7.58□□□□□ -1.2
MSH6-209ENST00000538136 ATP11CQ8NB49 1132 aa7.58□□□□□ -1.2
MSH6-209ENST00000538136 TMC2Q8TDI7 906 aa7.58□□□□□ -1.2
MSH6-209ENST00000538136 RHOXF2Q9BQY4 288 aa7.58□□□□□ -1.2
MSH6-209ENST00000538136 GTSE1Q9NYZ3 720 aa7.58□□□□□ -1.2
MSH6-209ENST00000538136 SIX4Q9UIU6 781 aa7.58□□□□□ -1.2
MSH6-209ENST00000538136 WDR27A2RRH5 827 aa7.58□□□□□ -1.2
MSH6-209ENST00000538136 PFKMP08237 780 aa7.58□□□□□ -1.2
MSH6-209ENST00000538136 ATICP31939 592 aa7.58□□□□□ -1.2
MSH6-209ENST00000538136 GALCP54803 685 aa7.58□□□□□ -1.2
MSH6-209ENST00000538136 ST8SIA6P61647 398 aa7.58□□□□□ -1.2
MSH6-209ENST00000538136 SEPT6Q14141 434 aa7.58□□□□□ -1.2
MSH6-209ENST00000538136 TAX1BP1Q86VP1 789 aa7.58□□□□□ -1.2
MSH6-209ENST00000538136 RXFP2Q8WXD0 754 aa7.58□□□□□ -1.2
MSH6-209ENST00000538136 FAM136AQ96C01 138 aa7.58□□□□□ -1.2
MSH6-209ENST00000538136 HVCN1Q96D96 273 aa7.58□□□□□ -1.2
MSH6-209ENST00000538136 TMA16Q96EY4 203 aaKnown RBP7.58□□□□□ -1.2
MSH6-209ENST00000538136 SMARCD1Q96GM5 515 aa7.58□□□□□ -1.2
MSH6-209ENST00000538136 CASD1Q96PB1 797 aa7.58□□□□□ -1.2
MSH6-209ENST00000538136 APOL2Q9BQE5 337 aa7.58□□□□□ -1.2
MSH6-209ENST00000538136 AP1M1Q9BXS5 423 aa7.58□□□□□ -1.2
MSH6-209ENST00000538136 THAP2Q9H0W7 228 aa7.58□□□□□ -1.2
MSH6-209ENST00000538136 OSGEPQ9NPF4 335 aa7.58□□□□□ -1.2
MSH6-209ENST00000538136 TMPRSS4Q9NRS4 437 aa7.58□□□□□ -1.2
MSH6-209ENST00000538136 TMLHEQ9NVH6 421 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms