RNA–Protein interactions for RNA: ENST00000538077.2

LINC00346-201, long intergenic non-protein coding RNA 346, humanhuman

BASIC

Gene LINC00346, Length 6,265 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346-201ENST00000538077 CAND2O75155 1236 aa11.6□□□□□ -0.55
LINC00346-201ENST00000538077 PGM5Q15124 567 aa11.6□□□□□ -0.55
LINC00346-201ENST00000538077 POM121L1PQ3SYA9 428 aa11.6□□□□□ -0.55
LINC00346-201ENST00000538077 NAPEPLDQ6IQ20 393 aa11.6□□□□□ -0.55
LINC00346-201ENST00000538077 PTAR1Q7Z6K3 402 aaPredicted RBP11.6□□□□□ -0.55
LINC00346-201ENST00000538077 FAM131BQ86XD5 332 aa11.6□□□□□ -0.55
LINC00346-201ENST00000538077 PARP9Q8IXQ6 854 aa11.6□□□□□ -0.55
LINC00346-201ENST00000538077 ADAM32Q8TC27 787 aa11.6□□□□□ -0.55
LINC00346-201ENST00000538077 TSC22D3Q99576 134 aa11.6□□□□□ -0.55
LINC00346-201ENST00000538077 RTFDC1Q9BY42 306 aaPredicted RBP11.6□□□□□ -0.55
LINC00346-201ENST00000538077 XPNPEP3Q9NQH7 507 aa11.6□□□□□ -0.55
LINC00346-201ENST00000538077 ALG6Q9Y672 507 aa11.6□□□□□ -0.55
LINC00346-201ENST00000538077 FDPSP14324 419 aaKnown RBP11.6□□□□□ -0.55
LINC00346-201ENST00000538077 NAMPTP43490 491 aa11.6□□□□□ -0.55
LINC00346-201ENST00000538077 MYL6P60660 151 aa11.6□□□□□ -0.55
LINC00346-201ENST00000538077 BTG3Q14201 252 aaPredicted RBP11.6□□□□□ -0.55
LINC00346-201ENST00000538077 CCDC142Q17RM4 750 aa11.6□□□□□ -0.55
LINC00346-201ENST00000538077 PPIL6Q8IXY8 311 aa11.6□□□□□ -0.55
LINC00346-201ENST00000538077 UCMAQ8WVF2 138 aa11.6□□□□□ -0.55
LINC00346-201ENST00000538077 THTPAQ9BU02 230 aa11.6□□□□□ -0.55
LINC00346-201ENST00000538077 KCNF1Q9H3M0 494 aa11.6□□□□□ -0.55
LINC00346-201ENST00000538077 HPS5Q9UPZ3 1129 aa11.6□□□□□ -0.55
LINC00346-201ENST00000538077 MYO1CO00159 1063 aa11.6□□□□□ -0.55
LINC00346-201ENST00000538077 STRNO43815 780 aa11.6□□□□□ -0.55
LINC00346-201ENST00000538077 TKTL1P51854 596 aa11.6□□□□□ -0.55
LINC00346-201ENST00000538077 CCDC15Q0P6D6 951 aa11.6□□□□□ -0.55
LINC00346-201ENST00000538077 OVGP1Q12889 678 aa11.6□□□□□ -0.55
LINC00346-201ENST00000538077 UGP2Q16851 508 aa11.6□□□□□ -0.55
LINC00346-201ENST00000538077 IYDQ6PHW0 289 aa11.6□□□□□ -0.55
LINC00346-201ENST00000538077 EMC1Q8N766 993 aa11.6□□□□□ -0.55
LINC00346-201ENST00000538077 ZSWIM2Q8NEG5 633 aa11.6□□□□□ -0.55
LINC00346-201ENST00000538077 LPCAT1Q8NF37 534 aa11.6□□□□□ -0.55
LINC00346-201ENST00000538077 SPATS2LQ9NUQ6 558 aaKnown RBP11.6□□□□□ -0.55
LINC00346-201ENST00000538077 SNX8Q9Y5X2 465 aa11.6□□□□□ -0.55
LINC00346-201ENST00000538077 FRMPD1Q5SYB0 1578 aa11.6□□□□□ -0.55
LINC00346-201ENST00000538077 USP31Q70CQ4 1352 aa11.6□□□□□ -0.55
LINC00346-201ENST00000538077 PCNX4Q63HM2 1172 aa11.6□□□□□ -0.55
LINC00346-201ENST00000538077 ADCK1Q86TW2 530 aa11.6□□□□□ -0.55
LINC00346-201ENST00000538077 PALB2Q86YC2 1186 aa11.6□□□□□ -0.55
LINC00346-201ENST00000538077 RIN3Q8TB24 985 aa11.6□□□□□ -0.55
LINC00346-201ENST00000538077 ZDHHC15Q96MV8 337 aa11.6□□□□□ -0.55
LINC00346-201ENST00000538077 SPATC1LQ9H0A9 340 aa11.6□□□□□ -0.55
LINC00346-201ENST00000538077 PKD2L2Q9NZM6 624 aa11.6□□□□□ -0.55
LINC00346-201ENST00000538077 PLA2G4CQ9UP65 541 aa11.6□□□□□ -0.55
LINC00346-201ENST00000538077 MOXD2PA6NHM9 499 aa11.59□□□□□ -0.55
LINC00346-201ENST00000538077 PPP1R3GB7ZBB8 358 aa11.59□□□□□ -0.55
LINC00346-201ENST00000538077 RBP3P10745 1247 aa11.59□□□□□ -0.55
LINC00346-201ENST00000538077 CCDC130P13994 396 aa11.59□□□□□ -0.55
LINC00346-201ENST00000538077 SERPINB9P50453 376 aa11.59□□□□□ -0.55
LINC00346-201ENST00000538077 SCNN1BP51168 640 aa11.59□□□□□ -0.55
LINC00346-201ENST00000538077 GEMP55040 296 aa11.59□□□□□ -0.55
LINC00346-201ENST00000538077 CNGA3Q16281 694 aa11.59□□□□□ -0.55
LINC00346-201ENST00000538077 FNDC3BQ53EP0 1204 aaKnown RBP11.59□□□□□ -0.55
LINC00346-201ENST00000538077 UGT3A1Q6NUS8 523 aa11.59□□□□□ -0.55
LINC00346-201ENST00000538077 TLK2Q86UE8 772 aa11.59□□□□□ -0.55
LINC00346-201ENST00000538077 MTG1Q9BT17 334 aaPredicted RBP11.59□□□□□ -0.55
LINC00346-201ENST00000538077 LOC100653049A0A140TA62 436 aa11.59□□□□□ -0.55
LINC00346-201ENST00000538077 KRT34O76011 436 aa11.59□□□□□ -0.55
LINC00346-201ENST00000538077 GPC1P35052 558 aa11.59□□□□□ -0.55
LINC00346-201ENST00000538077 COILP38432 576 aaPredicted RBP11.59□□□□□ -0.55
LINC00346-201ENST00000538077 TPGS1Q6ZTW0 290 aa11.59□□□□□ -0.55
LINC00346-201ENST00000538077 CDCA5Q96FF9 252 aa11.59□□□□□ -0.55
LINC00346-201ENST00000538077 STAMBPL1Q96FJ0 436 aa11.59□□□□□ -0.55
LINC00346-201ENST00000538077 APPL1Q9UKG1 709 aa11.59□□□□□ -0.55
LINC00346-201ENST00000538077 CCDC85CA6NKD9 419 aa11.59□□□□□ -0.55
LINC00346-201ENST00000538077 OGTO15294 1046 aa11.59□□□□□ -0.55
LINC00346-201ENST00000538077 CYP7B1O75881 506 aa11.59□□□□□ -0.55
LINC00346-201ENST00000538077 AMHP03971 560 aa11.59□□□□□ -0.55
LINC00346-201ENST00000538077 FGFR2P21802 821 aa11.59□□□□□ -0.55
LINC00346-201ENST00000538077 ADCYAP1R1P41586 468 aa11.59□□□□□ -0.55
LINC00346-201ENST00000538077 ANGPT1Q15389 498 aa11.59□□□□□ -0.55
LINC00346-201ENST00000538077 C16orf89Q6UX73 402 aa11.59□□□□□ -0.55
LINC00346-201ENST00000538077 PLEKHM3Q6ZWE6 761 aa11.59□□□□□ -0.55
LINC00346-201ENST00000538077 RIN2Q8WYP3 895 aaPredicted RBP11.59□□□□□ -0.55
LINC00346-201ENST00000538077 CCDC3Q9BQI4 270 aa11.59□□□□□ -0.55
LINC00346-201ENST00000538077 PACSIN1Q9BY11 444 aa11.59□□□□□ -0.55
LINC00346-201ENST00000538077 NSMCE4AQ9NXX6 385 aa11.59□□□□□ -0.55
LINC00346-201ENST00000538077 FBXO10Q9UK96 956 aa11.59□□□□□ -0.55
LINC00346-201ENST00000538077 FOXN3O00409 490 aaPredicted RBP11.59□□□□□ -0.55
LINC00346-201ENST00000538077 KDM1AO60341 852 aa11.59□□□□□ -0.55
LINC00346-201ENST00000538077 ABCB1P08183 1280 aaPredicted RBP11.59□□□□□ -0.55
LINC00346-201ENST00000538077 CYP11B2P19099 503 aa11.59□□□□□ -0.55
LINC00346-201ENST00000538077 HERVK_113P62684 666 aa11.59□□□□□ -0.55
LINC00346-201ENST00000538077 ACOX1Q15067 660 aa11.59□□□□□ -0.55
LINC00346-201ENST00000538077 TRIM60Q495X7 471 aa11.59□□□□□ -0.55
LINC00346-201ENST00000538077 CCDC81Q6ZN84 652 aa11.59□□□□□ -0.55
LINC00346-201ENST00000538077 TRAPPC11Q7Z392 1133 aa11.59□□□□□ -0.55
LINC00346-201ENST00000538077 DIS3LQ8TF46 1054 aaKnown RBP11.59□□□□□ -0.55
LINC00346-201ENST00000538077 MANSC1Q9H8J5 431 aa11.59□□□□□ -0.55
LINC00346-201ENST00000538077 NDOR1Q9UHB4 597 aa11.59□□□□□ -0.55
LINC00346-201ENST00000538077 ANXA9O76027 345 aa11.59□□□□□ -0.55
LINC00346-201ENST00000538077 VCLP18206 1134 aa11.59□□□□□ -0.55
LINC00346-201ENST00000538077 GCLCP48506 637 aaPredicted RBP11.59□□□□□ -0.55
LINC00346-201ENST00000538077 HDAC4P56524 1084 aa11.59□□□□□ -0.55
LINC00346-201ENST00000538077 TSGA10IPQ3SY00 556 aa11.59□□□□□ -0.55
LINC00346-201ENST00000538077 SLC39A12Q504Y0 691 aa11.59□□□□□ -0.55
LINC00346-201ENST00000538077 RAD9BQ6WBX8 426 aa11.59□□□□□ -0.55
LINC00346-201ENST00000538077 KIF2BQ8N4N8 673 aa11.59□□□□□ -0.55
LINC00346-201ENST00000538077 ZC4H2Q9NQZ6 224 aa11.59□□□□□ -0.55
LINC00346-201ENST00000538077 ARHGEF28Q8N1W1 1705 aaKnown RBP11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms