RNA–Protein interactions for RNA: ENST00000537981.5

RTN3-208, Transcript of reticulon 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTN3, Length 2,532 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-208ENST00000537981 HIC1Q14526 733 aa11.13□□□□□ -0.63
RTN3-208ENST00000537981 CALCRLQ16602 461 aa11.13□□□□□ -0.63
RTN3-208ENST00000537981 UBE2SQ16763 222 aa11.13□□□□□ -0.63
RTN3-208ENST00000537981 CCDC153Q494R4 210 aa11.13□□□□□ -0.63
RTN3-208ENST00000537981 OGFRL1Q5TC84 451 aaPredicted RBP11.13□□□□□ -0.63
RTN3-208ENST00000537981 NEK8Q86SG6 692 aa11.13□□□□□ -0.63
RTN3-208ENST00000537981 SNX29P2Q8IUI4 249 aa11.13□□□□□ -0.63
RTN3-208ENST00000537981 ARID3BQ8IVW6 561 aaPredicted RBP11.13□□□□□ -0.63
RTN3-208ENST00000537981 TAB3Q8N5C8 712 aaPredicted RBP11.13□□□□□ -0.63
RTN3-208ENST00000537981 ANKK1Q8NFD2 765 aa11.13□□□□□ -0.63
RTN3-208ENST00000537981 DCPSQ96C86 337 aaKnown RBP11.13□□□□□ -0.63
RTN3-208ENST00000537981 ZMAT2Q96NC0 199 aaKnown RBP11.13□□□□□ -0.63
RTN3-208ENST00000537981 MTMR9Q96QG7 549 aa11.13□□□□□ -0.63
RTN3-208ENST00000537981 HGH1Q9BTY7 390 aa11.13□□□□□ -0.63
RTN3-208ENST00000537981 ZNF696Q9H7X3 374 aa11.13□□□□□ -0.63
RTN3-208ENST00000537981 XAB2Q9HCS7 855 aaKnown RBP11.13□□□□□ -0.63
RTN3-208ENST00000537981 TAGLN3Q9UI15 199 aa11.13□□□□□ -0.63
RTN3-208ENST00000537981 MAST2Q6P0Q8 1798 aa11.13□□□□□ -0.63
RTN3-208ENST00000537981 SPATA31A1Q5TZJ5 1347 aa11.13□□□□□ -0.63
RTN3-208ENST00000537981 ANKRD34BA5PLL1 514 aa11.12□□□□□ -0.63
RTN3-208ENST00000537981 FAM47E-STBD1D6RA91 191 aa11.12□□□□□ -0.63
RTN3-208ENST00000537981 AQP9O43315 295 aa11.12□□□□□ -0.63
RTN3-208ENST00000537981 TNFAIP8O95379 198 aa11.12□□□□□ -0.63
RTN3-208ENST00000537981 PROCP04070 461 aa11.12□□□□□ -0.63
RTN3-208ENST00000537981 TRIM49P0CI25 452 aa11.12□□□□□ -0.63
RTN3-208ENST00000537981 TRIM49CP0CI26 452 aa11.12□□□□□ -0.63
RTN3-208ENST00000537981 STAT3P40763 770 aa11.12□□□□□ -0.63
RTN3-208ENST00000537981 CDK9P50750 372 aaKnown RBP11.12□□□□□ -0.63
RTN3-208ENST00000537981 SCNN1DP51172 638 aa11.12□□□□□ -0.63
RTN3-208ENST00000537981 NR1H2P55055 460 aa11.12□□□□□ -0.63
RTN3-208ENST00000537981 GPX6P59796 221 aa11.12□□□□□ -0.63
RTN3-208ENST00000537981 MRPL58Q14197 206 aaKnown RBP11.12□□□□□ -0.63
RTN3-208ENST00000537981 PHKG1Q16816 387 aa11.12□□□□□ -0.63
RTN3-208ENST00000537981 MAP3K21Q5TCX8 1036 aa11.12□□□□□ -0.63
RTN3-208ENST00000537981 CDHR3Q6ZTQ4 885 aa11.12□□□□□ -0.63
RTN3-208ENST00000537981 GABPB2Q8TAK5 448 aaPredicted RBP11.12□□□□□ -0.63
RTN3-208ENST00000537981 ZNF384Q8TF68 577 aa11.12□□□□□ -0.63
RTN3-208ENST00000537981 TANKQ92844 425 aa11.12□□□□□ -0.63
RTN3-208ENST00000537981 TUBB6Q9BUF5 446 aa11.12□□□□□ -0.63
RTN3-208ENST00000537981 OSBPL2Q9H1P3 480 aa11.12□□□□□ -0.63
RTN3-208ENST00000537981 GPRC5DQ9NZD1 345 aa11.12□□□□□ -0.63
RTN3-208ENST00000537981 STK17AQ9UEE5 414 aa11.12□□□□□ -0.63
RTN3-208ENST00000537981 POMPQ9Y244 141 aa11.12□□□□□ -0.63
RTN3-208ENST00000537981 RNF11Q9Y3C5 154 aa11.12□□□□□ -0.63
RTN3-208ENST00000537981 SF3B1O75533 1304 aaKnown RBP eCLIP11.12□□□□□ -0.636e-9■■■■■ 64.2
RTN3-208ENST00000537981 COL14A1Q05707 1796 aaKnown RBP11.12□□□□□ -0.63
RTN3-208ENST00000537981 POTEB3A0JP26 581 aa11.12□□□□□ -0.63
RTN3-208ENST00000537981 MIF4GDA9UHW6 222 aaKnown RBP11.12□□□□□ -0.63
RTN3-208ENST00000537981 POTECB2RU33 542 aa11.12□□□□□ -0.63
RTN3-208ENST00000537981 TNFRSF10BO14763 440 aa11.12□□□□□ -0.63
RTN3-208ENST00000537981 NKX2-5P52952 324 aaPredicted RBP11.12□□□□□ -0.63
RTN3-208ENST00000537981 MAPK10P53779 464 aa11.12□□□□□ -0.63
RTN3-208ENST00000537981 EN1Q05925 392 aaPredicted RBP11.12□□□□□ -0.63
RTN3-208ENST00000537981 TFDP1Q14186 410 aa11.12□□□□□ -0.63
RTN3-208ENST00000537981 SEPT7Q16181 437 aaKnown RBP11.12□□□□□ -0.63
RTN3-208ENST00000537981 TMEM119Q4V9L6 283 aa11.12□□□□□ -0.63
RTN3-208ENST00000537981 C2CD6Q53TS8 623 aa11.12□□□□□ -0.63
RTN3-208ENST00000537981 C11orf63Q6NUN7 778 aa11.12□□□□□ -0.63
RTN3-208ENST00000537981 POTEBQ6S5H4 581 aa11.12□□□□□ -0.63
RTN3-208ENST00000537981 KYAT3Q6YP21 454 aaKnown RBP11.12□□□□□ -0.63
RTN3-208ENST00000537981 BTLAQ7Z6A9 289 aa11.12□□□□□ -0.63
RTN3-208ENST00000537981 CROCCP3Q8IVE0 287 aa11.12□□□□□ -0.63
RTN3-208ENST00000537981 ZC3H3Q8IXZ2 948 aaKnown RBP11.12□□□□□ -0.63
RTN3-208ENST00000537981 LILRA2Q8N149 483 aa11.12□□□□□ -0.63
RTN3-208ENST00000537981 ACAP3Q96P50 834 aa11.12□□□□□ -0.63
RTN3-208ENST00000537981 NAP1L4Q99733 375 aaKnown RBP11.12□□□□□ -0.63
RTN3-208ENST00000537981 VAT1LQ9HCJ6 419 aa11.12□□□□□ -0.63
RTN3-208ENST00000537981 BARHL2Q9NY43 387 aa11.12□□□□□ -0.63
RTN3-208ENST00000537981 DPYSL4O14531 572 aa11.11□□□□□ -0.63
RTN3-208ENST00000537981 CYB561D2O14569 222 aa11.11□□□□□ -0.63
RTN3-208ENST00000537981 UGT1A9O60656 530 aa11.11□□□□□ -0.63
RTN3-208ENST00000537981 UGT1A6P19224 532 aa11.11□□□□□ -0.63
RTN3-208ENST00000537981 UGT1A1P22309 533 aa11.11□□□□□ -0.63
RTN3-208ENST00000537981 UGT1A4P22310 534 aa11.11□□□□□ -0.63
RTN3-208ENST00000537981 ADSSP30520 456 aa11.11□□□□□ -0.63
RTN3-208ENST00000537981 UGT1A3P35503 534 aa11.11□□□□□ -0.63
RTN3-208ENST00000537981 UGT1A5P35504 534 aa11.11□□□□□ -0.63
RTN3-208ENST00000537981 TCF7P36402 384 aaPredicted RBP11.11□□□□□ -0.63
RTN3-208ENST00000537981 NAPAP54920 295 aa11.11□□□□□ -0.63
RTN3-208ENST00000537981 AQP5P55064 265 aa11.11□□□□□ -0.63
RTN3-208ENST00000537981 GJC2Q5T442 439 aaPredicted RBP11.11□□□□□ -0.63
RTN3-208ENST00000537981 PPP2R2DQ66LE6 453 aa11.11□□□□□ -0.63
RTN3-208ENST00000537981 AAGABQ6PD74 315 aa11.11□□□□□ -0.63
RTN3-208ENST00000537981 TRIM72Q6ZMU5 477 aa11.11□□□□□ -0.63
RTN3-208ENST00000537981 AHI1Q8N157 1196 aa11.11□□□□□ -0.63
RTN3-208ENST00000537981 BANPQ8N9N5 519 aa11.11□□□□□ -0.63
RTN3-208ENST00000537981 MZB1Q8WU39 189 aa11.11□□□□□ -0.63
RTN3-208ENST00000537981 KAT5Q92993 513 aa11.11□□□□□ -0.63
RTN3-208ENST00000537981 SERAC1Q96JX3 654 aa11.11□□□□□ -0.63
RTN3-208ENST00000537981 BTBD9Q96Q07 612 aa11.11□□□□□ -0.63
RTN3-208ENST00000537981 MMP19Q99542 508 aa11.11□□□□□ -0.63
RTN3-208ENST00000537981 RIOK1Q9BRS2 568 aaKnown RBP11.11□□□□□ -0.63
RTN3-208ENST00000537981 NAA50Q9GZZ1 169 aaKnown RBP11.11□□□□□ -0.63
RTN3-208ENST00000537981 UGT1A7Q9HAW7 530 aa11.11□□□□□ -0.63
RTN3-208ENST00000537981 UGT1A10Q9HAW8 530 aa11.11□□□□□ -0.63
RTN3-208ENST00000537981 UGT1A8Q9HAW9 530 aa11.11□□□□□ -0.63
RTN3-208ENST00000537981 OLFML3Q9NRN5 406 aa11.11□□□□□ -0.63
RTN3-208ENST00000537981 GPSM3Q9Y4H4 160 aa11.11□□□□□ -0.63
RTN3-208ENST00000537981 A0A1B0GUL6 1792 aa11.11□□□□□ -0.63
RTN3-208ENST00000537981 USP17L3A6NCW0 530 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms