RNA–Protein interactions for RNA: ENST00000537063.1

UBE3B-207, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 3 BASIC

Gene UBE3B, Length 3,600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-207ENST00000537063 IRX5P78411 483 aaPredicted RBP9.74□□□□□ -0.85
UBE3B-207ENST00000537063 TMEM62Q0P6H9 643 aa9.74□□□□□ -0.85
UBE3B-207ENST00000537063 FASTKD3Q14CZ7 662 aaKnown RBP9.74□□□□□ -0.85
UBE3B-207ENST00000537063 PDK2Q15119 407 aa9.74□□□□□ -0.85
UBE3B-207ENST00000537063 RAB6CQ53S08 254 aa9.74□□□□□ -0.85
UBE3B-207ENST00000537063 FAM47CQ5HY64 1035 aa9.74□□□□□ -0.85
UBE3B-207ENST00000537063 TADA2BQ86TJ2 420 aa9.74□□□□□ -0.85
UBE3B-207ENST00000537063 CENPIQ92674 756 aaPredicted RBP9.74□□□□□ -0.85
UBE3B-207ENST00000537063 RAB6CQ9H0N0 254 aa9.74□□□□□ -0.85
UBE3B-207ENST00000537063 PCSK1NQ9UHG2 260 aa9.74□□□□□ -0.85
UBE3B-207ENST00000537063 NAALADL1Q9UQQ1 740 aa9.74□□□□□ -0.85
UBE3B-207ENST00000537063 SNX9Q9Y5X1 595 aa9.74□□□□□ -0.85
UBE3B-207ENST00000537063 TMEM120BA0PK00 339 aa9.74□□□□□ -0.85
UBE3B-207ENST00000537063 MDM4O15151 490 aa9.74□□□□□ -0.85
UBE3B-207ENST00000537063 PAPSS1O43252 624 aaPredicted RBP9.74□□□□□ -0.85
UBE3B-207ENST00000537063 ECM2O94769 699 aaPredicted RBP9.74□□□□□ -0.85
UBE3B-207ENST00000537063 FSBPO95073 299 aa9.74□□□□□ -0.85
UBE3B-207ENST00000537063 OAS1P00973 400 aaKnown RBP9.74□□□□□ -0.85
UBE3B-207ENST00000537063 CD4P01730 458 aa9.74□□□□□ -0.85
UBE3B-207ENST00000537063 PDGFRAP16234 1089 aa9.74□□□□□ -0.85
UBE3B-207ENST00000537063 TSHRP16473 764 aa9.74□□□□□ -0.85
UBE3B-207ENST00000537063 IL4RP24394 825 aa9.74□□□□□ -0.85
UBE3B-207ENST00000537063 PTPN9P43378 593 aa9.74□□□□□ -0.85
UBE3B-207ENST00000537063 PSMC4P43686 418 aa9.74□□□□□ -0.85
UBE3B-207ENST00000537063 SLC18A1P54219 525 aa9.74□□□□□ -0.85
UBE3B-207ENST00000537063 CCDC38Q502W7 563 aa9.74□□□□□ -0.85
UBE3B-207ENST00000537063 OR6B2Q6IFH4 312 aa9.74□□□□□ -0.85
UBE3B-207ENST00000537063 ACOT1Q86TX2 421 aa9.74□□□□□ -0.85
UBE3B-207ENST00000537063 NCAPGQ9BPX3 1015 aa9.74□□□□□ -0.85
UBE3B-207ENST00000537063 CCDC77Q9BR77 488 aa9.74□□□□□ -0.85
UBE3B-207ENST00000537063 WDR83Q9BRX9 315 aaKnown RBP9.74□□□□□ -0.85
UBE3B-207ENST00000537063 RASSF4Q9H2L5 321 aa9.74□□□□□ -0.85
UBE3B-207ENST00000537063 PNPLA4P41247 253 aa9.74□□□□□ -0.85
UBE3B-207ENST00000537063 CTCFP49711 727 aaPredicted RBP9.74□□□□□ -0.85
UBE3B-207ENST00000537063 CPT1AP50416 773 aa9.74□□□□□ -0.85
UBE3B-207ENST00000537063 DYNLT1P63172 113 aa9.74□□□□□ -0.85
UBE3B-207ENST00000537063 NR1H3Q13133 447 aa9.74□□□□□ -0.85
UBE3B-207ENST00000537063 C15orf59Q2T9L4 293 aaPredicted RBP9.74□□□□□ -0.85
UBE3B-207ENST00000537063 PRAMEF19Q5SWL8 479 aa9.74□□□□□ -0.85
UBE3B-207ENST00000537063 SLC9A4Q6AI14 798 aa9.74□□□□□ -0.85
UBE3B-207ENST00000537063 CENPUQ71F23 418 aa9.74□□□□□ -0.85
UBE3B-207ENST00000537063 RFX6Q8HWS3 928 aa9.74□□□□□ -0.85
UBE3B-207ENST00000537063 UNC45BQ8IWX7 931 aa9.74□□□□□ -0.85
UBE3B-207ENST00000537063 HSPH1Q92598 858 aa9.74□□□□□ -0.85
UBE3B-207ENST00000537063 PRMT1Q99873 361 aaKnown RBP9.74□□□□□ -0.85
UBE3B-207ENST00000537063 UBN1Q9NPG3 1134 aa9.74□□□□□ -0.85
UBE3B-207ENST00000537063 STAU2Q9NUL3 570 aaKnown RBP eCLIP9.74□□□□□ -0.85
UBE3B-207ENST00000537063 SMIM28A0A1B0GU29 152 aa9.73□□□□□ -0.85
UBE3B-207ENST00000537063 IGF2BP3O00425 579 aaKnown RBP eCLIP9.73□□□□□ -0.85
UBE3B-207ENST00000537063 CREB1P16220 341 aa9.73□□□□□ -0.85
UBE3B-207ENST00000537063 EIF3EP60228 445 aaKnown RBP9.73□□□□□ -0.85
UBE3B-207ENST00000537063 MPP2Q14168 576 aa9.73□□□□□ -0.85
UBE3B-207ENST00000537063 TFDP2Q14188 446 aa9.73□□□□□ -0.85
UBE3B-207ENST00000537063 ITIH4Q14624 930 aa9.73□□□□□ -0.85
UBE3B-207ENST00000537063 FBXO47Q5MNV8 452 aa9.73□□□□□ -0.85
UBE3B-207ENST00000537063 ANKRD22Q5VYY1 191 aa9.73□□□□□ -0.85
UBE3B-207ENST00000537063 CHADLQ6NUI6 762 aa9.73□□□□□ -0.85
UBE3B-207ENST00000537063 SLC26A9Q7LBE3 791 aa9.73□□□□□ -0.85
UBE3B-207ENST00000537063 CACNA2D3Q8IZS8 1091 aa9.73□□□□□ -0.85
UBE3B-207ENST00000537063 PPM1EQ8WY54 764 aa9.73□□□□□ -0.85
UBE3B-207ENST00000537063 P3H4Q92791 437 aa9.73□□□□□ -0.85
UBE3B-207ENST00000537063 RNF157Q96PX1 679 aa9.73□□□□□ -0.85
UBE3B-207ENST00000537063 DHRS4Q9BTZ2 278 aa9.73□□□□□ -0.85
UBE3B-207ENST00000537063 CPA4Q9UI42 421 aa9.73□□□□□ -0.85
UBE3B-207ENST00000537063 HES2Q9Y543 173 aa9.73□□□□□ -0.85
UBE3B-207ENST00000537063 SCN10AQ9Y5Y9 1956 aa9.73□□□□□ -0.85
UBE3B-207ENST00000537063 CLUHO75153 1309 aa9.73□□□□□ -0.85
UBE3B-207ENST00000537063 DCAF8L1A6NGE4 600 aa9.73□□□□□ -0.85
UBE3B-207ENST00000537063 ANKRD65E5RJM6 399 aa9.73□□□□□ -0.85
UBE3B-207ENST00000537063 MCF2LO15068 1137 aa9.73□□□□□ -0.85
UBE3B-207ENST00000537063 SPTLC1O15269 473 aa9.73□□□□□ -0.85
UBE3B-207ENST00000537063 FGFR1P11362 822 aa9.73□□□□□ -0.85
UBE3B-207ENST00000537063 TGM2P21980 687 aa9.73□□□□□ -0.85
UBE3B-207ENST00000537063 CRYBB1P53674 252 aaPredicted RBP9.73□□□□□ -0.85
UBE3B-207ENST00000537063 SNX16P57768 344 aa9.73□□□□□ -0.85
UBE3B-207ENST00000537063 GPX6P59796 221 aa9.73□□□□□ -0.85
UBE3B-207ENST00000537063 PDE4CQ08493 712 aa9.73□□□□□ -0.85
UBE3B-207ENST00000537063 HIF1AQ16665 826 aa9.73□□□□□ -0.85
UBE3B-207ENST00000537063 LACTB2Q53H82 288 aaPredicted RBP9.73□□□□□ -0.85
UBE3B-207ENST00000537063 BOLA3Q53S33 107 aa9.73□□□□□ -0.85
UBE3B-207ENST00000537063 EFHC2Q5JST6 749 aa9.73□□□□□ -0.85
UBE3B-207ENST00000537063 GKAP1Q5VSY0 366 aaPredicted RBP9.73□□□□□ -0.85
UBE3B-207ENST00000537063 CST9Q5W186 159 aa9.73□□□□□ -0.85
UBE3B-207ENST00000537063 C10orf67Q8IYJ2 551 aa9.73□□□□□ -0.85
UBE3B-207ENST00000537063 NME8Q8N427 588 aa9.73□□□□□ -0.85
UBE3B-207ENST00000537063 PQLC3Q8N755 202 aa9.73□□□□□ -0.85
UBE3B-207ENST00000537063 ANKRD52Q8NB46 1076 aa9.73□□□□□ -0.85
UBE3B-207ENST00000537063 DNAJB3Q8WWF6 145 aa9.73□□□□□ -0.85
UBE3B-207ENST00000537063 LENG1Q96BZ8 264 aaPredicted RBP9.73□□□□□ -0.85
UBE3B-207ENST00000537063 ZNF560Q96MR9 790 aa9.73□□□□□ -0.85
UBE3B-207ENST00000537063 DPEP3Q9H4B8 488 aa9.73□□□□□ -0.85
UBE3B-207ENST00000537063 SLC24A2Q9UI40 661 aa9.73□□□□□ -0.85
UBE3B-207ENST00000537063 PRPSAP2O60256 369 aa9.73□□□□□ -0.85
UBE3B-207ENST00000537063 STIP1P31948 543 aaKnown RBP9.73□□□□□ -0.85
UBE3B-207ENST00000537063 MAGEA6P43360 314 aa9.73□□□□□ -0.85
UBE3B-207ENST00000537063 RGS7P49802 495 aa9.73□□□□□ -0.85
UBE3B-207ENST00000537063 BCAT1P54687 386 aa9.73□□□□□ -0.85
UBE3B-207ENST00000537063 BST2Q10589 180 aaKnown RBP9.73□□□□□ -0.85
UBE3B-207ENST00000537063 MMRN1Q13201 1228 aa9.73□□□□□ -0.85
UBE3B-207ENST00000537063 KCNJ11Q14654 390 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms