RNA–Protein interactions for RNA: ENST00000536742.5

CCDC60-203, Transcript of coiled-coil domain containing 60, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCDC60, Length 886 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC60-203ENST00000536742 FAM124AQ86V42 546 aa7.58□□□□□ -1.2
CCDC60-203ENST00000536742 KLHL36Q8N4N3 616 aa7.58□□□□□ -1.2
CCDC60-203ENST00000536742 CELF5Q8N6W0 485 aaKnown RBP7.58□□□□□ -1.2
CCDC60-203ENST00000536742 DBF4BQ8NFT6 615 aa7.58□□□□□ -1.2
CCDC60-203ENST00000536742 RUNDC1Q96C34 613 aa7.58□□□□□ -1.2
CCDC60-203ENST00000536742 MYL10Q9BUA6 226 aa7.58□□□□□ -1.2
CCDC60-203ENST00000536742 POFUT1Q9H488 388 aa7.58□□□□□ -1.2
CCDC60-203ENST00000536742 BARX1Q9HBU1 254 aaPredicted RBP7.58□□□□□ -1.2
CCDC60-203ENST00000536742 LUC7LQ9NQ29 371 aaKnown RBP7.58□□□□□ -1.2
CCDC60-203ENST00000536742 SYNPO2Q9UMS6 1093 aa7.58□□□□□ -1.2
CCDC60-203ENST00000536742 VWA7Q9Y334 891 aa7.58□□□□□ -1.2
CCDC60-203ENST00000536742 NEUROG3Q9Y4Z2 214 aa7.58□□□□□ -1.2
CCDC60-203ENST00000536742 NUMBLQ9Y6R0 609 aa7.58□□□□□ -1.2
CCDC60-203ENST00000536742 SCN10AQ9Y5Y9 1956 aa7.58□□□□□ -1.2
CCDC60-203ENST00000536742 AKAP13Q12802 2813 aa7.57□□□□□ -1.2
CCDC60-203ENST00000536742 ADGRA3Q8IWK6 1321 aa7.57□□□□□ -1.2
CCDC60-203ENST00000536742 A0A0G2JNJ9 132 aa7.57□□□□□ -1.2
CCDC60-203ENST00000536742 CAPN8A6NHC0 703 aa7.57□□□□□ -1.2
CCDC60-203ENST00000536742 ASB14A6NK59 587 aa7.57□□□□□ -1.2
CCDC60-203ENST00000536742 DDX3XO00571 662 aaKnown RBP eCLIP7.57□□□□□ -1.2
CCDC60-203ENST00000536742 PER2O15055 1255 aa7.57□□□□□ -1.2
CCDC60-203ENST00000536742 C1QL1O75973 258 aa7.57□□□□□ -1.2
CCDC60-203ENST00000536742 PRB1P04280 392 aa7.57□□□□□ -1.2
CCDC60-203ENST00000536742 ITGB1P05556 798 aa7.57□□□□□ -1.2
CCDC60-203ENST00000536742 DNAJB1P25685 340 aa7.57□□□□□ -1.2
CCDC60-203ENST00000536742 TMPOP42166 694 aaKnown RBP7.57□□□□□ -1.2
CCDC60-203ENST00000536742 CCR10P46092 362 aa7.57□□□□□ -1.2
CCDC60-203ENST00000536742 MANFP55145 182 aaKnown RBP7.57□□□□□ -1.2
CCDC60-203ENST00000536742 SESN2P58004 480 aaPredicted RBP7.57□□□□□ -1.2
CCDC60-203ENST00000536742 MECOMQ03112 1051 aa7.57□□□□□ -1.2
CCDC60-203ENST00000536742 TOP3AQ13472 1001 aaPredicted RBP7.57□□□□□ -1.2
CCDC60-203ENST00000536742 EIF4HQ15056 248 aaKnown RBP7.57□□□□□ -1.2
CCDC60-203ENST00000536742 NONOQ15233 471 aaKnown RBP eCLIP7.57□□□□□ -1.2
CCDC60-203ENST00000536742 CCDC6Q16204 474 aa7.57□□□□□ -1.2
CCDC60-203ENST00000536742 DGKDQ16760 1214 aa7.57□□□□□ -1.2
CCDC60-203ENST00000536742 CERKLQ49MI3 558 aaPredicted RBP7.57□□□□□ -1.2
CCDC60-203ENST00000536742 AASDHQ4L235 1098 aaPredicted RBP7.57□□□□□ -1.2
CCDC60-203ENST00000536742 LRRC24Q50LG9 513 aa7.57□□□□□ -1.2
CCDC60-203ENST00000536742 ERICH6BQ5W0A0 696 aa7.57□□□□□ -1.2
CCDC60-203ENST00000536742 CNTD1Q8N815 330 aa7.57□□□□□ -1.2
CCDC60-203ENST00000536742 VN1R2Q8NFZ6 395 aa7.57□□□□□ -1.2
CCDC60-203ENST00000536742 ADAMTS17Q8TE56 1095 aa7.57□□□□□ -1.2
CCDC60-203ENST00000536742 POF1BQ8WVV4 589 aa7.57□□□□□ -1.2
CCDC60-203ENST00000536742 AJUBAQ96IF1 538 aa7.57□□□□□ -1.2
CCDC60-203ENST00000536742 NOL10Q9BSC4 688 aaKnown RBP7.57□□□□□ -1.2
CCDC60-203ENST00000536742 ADAM7Q9H2U9 754 aa7.57□□□□□ -1.2
CCDC60-203ENST00000536742 TOPORSQ9NS56 1045 aaPredicted RBP7.57□□□□□ -1.2
CCDC60-203ENST00000536742 Q9UFV3 132 aa7.57□□□□□ -1.2
CCDC60-203ENST00000536742 KALRNO60229 2985 aa7.57□□□□□ -1.2
CCDC60-203ENST00000536742 RALGAPA1Q6GYQ0 2036 aa7.57□□□□□ -1.2
CCDC60-203ENST00000536742 RAD50Q92878 1312 aa7.56□□□□□ -1.2
CCDC60-203ENST00000536742 A0A0A6YYJ9 748 aa7.56□□□□□ -1.2
CCDC60-203ENST00000536742 ELL2O00472 640 aaPredicted RBP7.56□□□□□ -1.2
CCDC60-203ENST00000536742 VWA5AO00534 786 aa7.56□□□□□ -1.2
CCDC60-203ENST00000536742 CYP1A1P04798 512 aaPredicted RBP7.56□□□□□ -1.2
CCDC60-203ENST00000536742 MMP3P08254 477 aa7.56□□□□□ -1.2
CCDC60-203ENST00000536742 PPP2R1AP30153 589 aa7.56□□□□□ -1.2
CCDC60-203ENST00000536742 KRT85P78386 507 aa7.56□□□□□ -1.2
CCDC60-203ENST00000536742 CD83Q01151 205 aa7.56□□□□□ -1.2
CCDC60-203ENST00000536742 TROAPQ12815 778 aa7.56□□□□□ -1.2
CCDC60-203ENST00000536742 KCNC3Q14003 757 aa7.56□□□□□ -1.2
CCDC60-203ENST00000536742 BTG3Q14201 252 aaPredicted RBP7.56□□□□□ -1.2
CCDC60-203ENST00000536742 SYDE2Q5VT97 1194 aa7.56□□□□□ -1.2
CCDC60-203ENST00000536742 XRRA1Q6P2D8 792 aa7.56□□□□□ -1.2
CCDC60-203ENST00000536742 Q6ZUG5 572 aa7.56□□□□□ -1.2
CCDC60-203ENST00000536742 FERMT3Q86UX7 667 aa7.56□□□□□ -1.2
CCDC60-203ENST00000536742 SESTD1Q86VW0 696 aa7.56□□□□□ -1.2
CCDC60-203ENST00000536742 ANKRD35Q8N283 1001 aa7.56□□□□□ -1.2
CCDC60-203ENST00000536742 FAM133AQ8N9E0 248 aa7.56□□□□□ -1.2
CCDC60-203ENST00000536742 TP53I13Q8NBR0 393 aaPredicted RBP7.56□□□□□ -1.2
CCDC60-203ENST00000536742 LSM14AQ8ND56 463 aaKnown RBP7.56□□□□□ -1.2
CCDC60-203ENST00000536742 PJA1Q8NG27 643 aa7.56□□□□□ -1.2
CCDC60-203ENST00000536742 LMBR1Q8WVP7 490 aa7.56□□□□□ -1.2
CCDC60-203ENST00000536742 DNAAF4Q8WXU2 420 aa7.56□□□□□ -1.2
CCDC60-203ENST00000536742 SSH1Q8WYL5 1049 aa7.56□□□□□ -1.2
CCDC60-203ENST00000536742 SEPT8Q92599 483 aa7.56□□□□□ -1.2
CCDC60-203ENST00000536742 RAX2Q96IS3 184 aa7.56□□□□□ -1.2
CCDC60-203ENST00000536742 LCORQ96JN0 433 aaPredicted RBP7.56□□□□□ -1.2
CCDC60-203ENST00000536742 CEP89Q96ST8 783 aa7.56□□□□□ -1.2
CCDC60-203ENST00000536742 APOL5Q9BWW9 433 aa7.56□□□□□ -1.2
CCDC60-203ENST00000536742 STK31Q9BXU1 1019 aa7.56□□□□□ -1.2
CCDC60-203ENST00000536742 TEX13BQ9BXU2 312 aa7.56□□□□□ -1.2
CCDC60-203ENST00000536742 HAPLN2Q9GZV7 340 aa7.56□□□□□ -1.2
CCDC60-203ENST00000536742 DDX56Q9NY93 547 aaKnown RBP7.56□□□□□ -1.2
CCDC60-203ENST00000536742 IGSF9Q9P2J2 1179 aa7.56□□□□□ -1.2
CCDC60-203ENST00000536742 ADAM29Q9UKF5 820 aa7.56□□□□□ -1.2
CCDC60-203ENST00000536742 PDS5AQ29RF7 1337 aaKnown RBP7.55□□□□□ -1.2
CCDC60-203ENST00000536742 OTOL1A6NHN0 477 aaPredicted RBP7.55□□□□□ -1.2
CCDC60-203ENST00000536742 NRP2O60462 931 aa7.55□□□□□ -1.2
CCDC60-203ENST00000536742 BAG3O95817 575 aa7.55□□□□□ -1.2
CCDC60-203ENST00000536742 MTHFD2P13995 350 aa7.55□□□□□ -1.2
CCDC60-203ENST00000536742 ENPP1P22413 925 aa7.55□□□□□ -1.2
CCDC60-203ENST00000536742 BUD31P41223 144 aaPredicted RBP7.55□□□□□ -1.2
CCDC60-203ENST00000536742 MAGEA9P43362 315 aa7.55□□□□□ -1.2
CCDC60-203ENST00000536742 NOVA1P51513 510 aaKnown RBP7.55□□□□□ -1.2
CCDC60-203ENST00000536742 UBE3AQ05086 875 aa7.55□□□□□ -1.2
CCDC60-203ENST00000536742 KLF1Q13351 362 aaPredicted RBP7.55□□□□□ -1.2
CCDC60-203ENST00000536742 MAN2A1Q16706 1144 aa7.55□□□□□ -1.2
CCDC60-203ENST00000536742 DUSP28Q4G0W2 176 aa7.55□□□□□ -1.2
CCDC60-203ENST00000536742 SLC4A10Q6U841 1118 aa7.55□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 56.6 ms