RNA–Protein interactions for RNA: ENST00000536513.5

ABCA4-207, Transcript of ATP binding cassette subfamily A member 4, humanhuman

TSL 1 (best) BASIC

Gene ABCA4, Length 3,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-207ENST00000536513 RWDD2BP57060 319 aa8.62□□□□□ -1.03
ABCA4-207ENST00000536513 YWHAEP62258 255 aaKnown RBP8.62□□□□□ -1.03
ABCA4-207ENST00000536513 SETDB1Q15047 1291 aa8.62□□□□□ -1.03
ABCA4-207ENST00000536513 CLEC16AQ2KHT3 1053 aa8.62□□□□□ -1.03
ABCA4-207ENST00000536513 ASTE1Q2TB18 679 aaPredicted RBP8.62□□□□□ -1.03
ABCA4-207ENST00000536513 FAXCQ5TGI0 409 aa8.62□□□□□ -1.03
ABCA4-207ENST00000536513 TXNRD3NBQ6F5E7 133 aa8.62□□□□□ -1.03
ABCA4-207ENST00000536513 TAF2Q6P1X5 1199 aa8.62□□□□□ -1.03
ABCA4-207ENST00000536513 CREG2Q8IUH2 290 aa8.62□□□□□ -1.03
ABCA4-207ENST00000536513 CCNYQ8ND76 341 aa8.62□□□□□ -1.03
ABCA4-207ENST00000536513 MYCBPAPQ8TBZ2 947 aa8.62□□□□□ -1.03
ABCA4-207ENST00000536513 SYN2Q92777 582 aaPredicted RBP8.62□□□□□ -1.03
ABCA4-207ENST00000536513 PWWP2AQ96N64 755 aa8.62□□□□□ -1.03
ABCA4-207ENST00000536513 SEPT5Q99719 369 aaPredicted RBP8.62□□□□□ -1.03
ABCA4-207ENST00000536513 MIOSQ9NXC5 875 aa8.62□□□□□ -1.03
ABCA4-207ENST00000536513 GTF2IRD1Q9UHL9 959 aa8.62□□□□□ -1.03
ABCA4-207ENST00000536513 UBQLN1Q9UMX0 589 aaKnown RBP8.62□□□□□ -1.03
ABCA4-207ENST00000536513 HMGB1P1B2RPK0 211 aaPredicted RBP8.62□□□□□ -1.03
ABCA4-207ENST00000536513 H7C0C1 242 aa8.62□□□□□ -1.03
ABCA4-207ENST00000536513 P4HA2O15460 535 aa8.62□□□□□ -1.03
ABCA4-207ENST00000536513 XPOTO43592 962 aaKnown RBP8.62□□□□□ -1.03
ABCA4-207ENST00000536513 SRGAP2BP0DMP2 458 aa8.62□□□□□ -1.03
ABCA4-207ENST00000536513 GRIK1P39086 918 aa8.62□□□□□ -1.03
ABCA4-207ENST00000536513 ATP5OP48047 213 aa8.62□□□□□ -1.03
ABCA4-207ENST00000536513 NDUFV1P49821 464 aa8.62□□□□□ -1.03
ABCA4-207ENST00000536513 CDH6P55285 790 aa8.62□□□□□ -1.03
ABCA4-207ENST00000536513 GCNT1Q02742 428 aa8.62□□□□□ -1.03
ABCA4-207ENST00000536513 MAMSTRQ6ZN01 415 aa8.62□□□□□ -1.03
ABCA4-207ENST00000536513 MSL3Q8N5Y2 521 aaKnown RBP8.62□□□□□ -1.03
ABCA4-207ENST00000536513 STAMBPL1Q96FJ0 436 aa8.62□□□□□ -1.03
ABCA4-207ENST00000536513 SENP8Q96LD8 212 aa8.62□□□□□ -1.03
ABCA4-207ENST00000536513 FBXL18Q96ME1 805 aa8.62□□□□□ -1.03
ABCA4-207ENST00000536513 TSPAN18Q96SJ8 248 aa8.62□□□□□ -1.03
ABCA4-207ENST00000536513 MAGEB5Q9BZ81 275 aa8.62□□□□□ -1.03
ABCA4-207ENST00000536513 VCXQ9H320 206 aa8.62□□□□□ -1.03
ABCA4-207ENST00000536513 SUDS3Q9H7L9 328 aaPredicted RBP8.62□□□□□ -1.03
ABCA4-207ENST00000536513 RSAD1Q9HA92 442 aa8.62□□□□□ -1.03
ABCA4-207ENST00000536513 NOCTQ9UK39 431 aaKnown RBP8.62□□□□□ -1.03
ABCA4-207ENST00000536513 SLC27A5Q9Y2P5 690 aa8.62□□□□□ -1.03
ABCA4-207ENST00000536513 SLC45A1Q9Y2W3 748 aa8.62□□□□□ -1.03
ABCA4-207ENST00000536513 UTP11Q9Y3A2 253 aaKnown RBP8.62□□□□□ -1.03
ABCA4-207ENST00000536513 SMIM35A0A1B0GVV1 85 aa8.61□□□□□ -1.03
ABCA4-207ENST00000536513 GPR182O15218 404 aa8.61□□□□□ -1.03
ABCA4-207ENST00000536513 SPTLC1O15269 473 aa8.61□□□□□ -1.03
ABCA4-207ENST00000536513 B4GALT4O60513 344 aa8.61□□□□□ -1.03
ABCA4-207ENST00000536513 CAND2O75155 1236 aa8.61□□□□□ -1.03
ABCA4-207ENST00000536513 CYBAP13498 195 aa8.61□□□□□ -1.03
ABCA4-207ENST00000536513 HNRNPH3P31942 346 aaKnown RBP8.61□□□□□ -1.03
ABCA4-207ENST00000536513 CRYBB1P53674 252 aaPredicted RBP8.61□□□□□ -1.03
ABCA4-207ENST00000536513 TAS2R40P59535 323 aa8.61□□□□□ -1.03
ABCA4-207ENST00000536513 ZBTB16Q05516 673 aa8.61□□□□□ -1.03
ABCA4-207ENST00000536513 PTPN20Q4JDL3 420 aa8.61□□□□□ -1.03
ABCA4-207ENST00000536513 LRRC23Q53EV4 343 aaPredicted RBP8.61□□□□□ -1.03
ABCA4-207ENST00000536513 CCDC26Q8TAB7 109 aa8.61□□□□□ -1.03
ABCA4-207ENST00000536513 ATP6V1G3Q96LB4 118 aa8.61□□□□□ -1.03
ABCA4-207ENST00000536513 GBP5Q96PP8 586 aa8.61□□□□□ -1.03
ABCA4-207ENST00000536513 PLVAPQ9BX97 442 aa8.61□□□□□ -1.03
ABCA4-207ENST00000536513 NOD2Q9HC29 1040 aa8.61□□□□□ -1.03
ABCA4-207ENST00000536513 MRPL47Q9HD33 250 aaKnown RBP8.61□□□□□ -1.03
ABCA4-207ENST00000536513 IGKV6-21A0A0C4DH24 114 aa8.61□□□□□ -1.03
ABCA4-207ENST00000536513 TBKBP1A7MCY6 615 aa8.61□□□□□ -1.03
ABCA4-207ENST00000536513 MED7O43513 233 aa8.61□□□□□ -1.03
ABCA4-207ENST00000536513 GPR32O75388 356 aa8.61□□□□□ -1.03
ABCA4-207ENST00000536513 ADIGQ0VDE8 80 aa8.61□□□□□ -1.03
ABCA4-207ENST00000536513 SMYD5Q6GMV2 418 aa8.61□□□□□ -1.03
ABCA4-207ENST00000536513 RWDD4Q6NW29 188 aaKnown RBP8.61□□□□□ -1.03
ABCA4-207ENST00000536513 SLC30A9Q6PML9 568 aa8.61□□□□□ -1.03
ABCA4-207ENST00000536513 ZNF410Q86VK4 478 aa8.61□□□□□ -1.03
ABCA4-207ENST00000536513 C12orf56Q8IXR9 622 aa8.61□□□□□ -1.03
ABCA4-207ENST00000536513 DIS3LQ8TF46 1054 aaKnown RBP8.61□□□□□ -1.03
ABCA4-207ENST00000536513 MLXIPLQ9NP71 852 aa8.61□□□□□ -1.03
ABCA4-207ENST00000536513 KRT82Q9NSB4 513 aa8.61□□□□□ -1.03
ABCA4-207ENST00000536513 TBK1Q9UHD2 729 aa8.61□□□□□ -1.03
ABCA4-207ENST00000536513 FNDC3AQ9Y2H6 1198 aaKnown RBP8.61□□□□□ -1.03
ABCA4-207ENST00000536513 CASP8AP2Q9UKL3 1982 aa8.61□□□□□ -1.03
ABCA4-207ENST00000536513 TARSL2A2RTX5 802 aaKnown RBP8.6□□□□□ -1.03
ABCA4-207ENST00000536513 ARL5CA6NH57 179 aa8.6□□□□□ -1.03
ABCA4-207ENST00000536513 PRPSAP2O60256 369 aa8.6□□□□□ -1.03
ABCA4-207ENST00000536513 ACSL3O95573 720 aa8.6□□□□□ -1.03
ABCA4-207ENST00000536513 ITGB1P05556 798 aa8.6□□□□□ -1.03
ABCA4-207ENST00000536513 DESP17661 470 aa8.6□□□□□ -1.03
ABCA4-207ENST00000536513 ARHGEF6Q15052 776 aa8.6□□□□□ -1.03
ABCA4-207ENST00000536513 NT5DC3Q86UY8 548 aa8.6□□□□□ -1.03
ABCA4-207ENST00000536513 HOOK3Q86VS8 718 aa8.6□□□□□ -1.03
ABCA4-207ENST00000536513 MIB1Q86YT6 1006 aa8.6□□□□□ -1.03
ABCA4-207ENST00000536513 KIF2BQ8N4N8 673 aa8.6□□□□□ -1.03
ABCA4-207ENST00000536513 PPFIBP2Q8ND30 876 aa8.6□□□□□ -1.03
ABCA4-207ENST00000536513 ERLEC1Q96DZ1 483 aa8.6□□□□□ -1.03
ABCA4-207ENST00000536513 TMPRSS4Q9NRS4 437 aa8.6□□□□□ -1.03
ABCA4-207ENST00000536513 TTC3P53804 2025 aa8.6□□□□□ -1.03
ABCA4-207ENST00000536513 hCG_2014768A0A024R1R8 64 aa8.6□□□□□ -1.03
ABCA4-207ENST00000536513 PODXLO00592 558 aa8.6□□□□□ -1.03
ABCA4-207ENST00000536513 LUC7L3O95232 432 aaKnown RBP8.6□□□□□ -1.03
ABCA4-207ENST00000536513 ABCD1P33897 745 aa8.6□□□□□ -1.03
ABCA4-207ENST00000536513 PRKCIP41743 596 aa8.6□□□□□ -1.03
ABCA4-207ENST00000536513 ASPAP45381 313 aa8.6□□□□□ -1.03
ABCA4-207ENST00000536513 TM4SF4P48230 202 aa8.6□□□□□ -1.03
ABCA4-207ENST00000536513 DR1Q01658 176 aa8.6□□□□□ -1.03
ABCA4-207ENST00000536513 CALCOCO2Q13137 446 aa8.6□□□□□ -1.03
ABCA4-207ENST00000536513 MMRN1Q13201 1228 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms