RNA–Protein interactions for RNA: ENST00000536212.1

VPS33A-203, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 4

Gene VPS33A, Length 567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-203ENST00000536212 NDC80O14777 642 aa6.04□□□□□ -1.44
VPS33A-203ENST00000536212 PRPF4O43172 522 aaKnown RBP eCLIP6.04□□□□□ -1.44
VPS33A-203ENST00000536212 THAP12O43422 761 aa6.04□□□□□ -1.44
VPS33A-203ENST00000536212 LIASO43766 372 aa6.04□□□□□ -1.44
VPS33A-203ENST00000536212 HLA-DRAP01903 254 aa6.04□□□□□ -1.44
VPS33A-203ENST00000536212 KRT5P13647 590 aa6.04□□□□□ -1.44
VPS33A-203ENST00000536212 EDN3P14138 238 aa6.04□□□□□ -1.44
VPS33A-203ENST00000536212 CCNB1P14635 433 aa6.04□□□□□ -1.44
VPS33A-203ENST00000536212 EZRP15311 586 aaKnown RBP6.04□□□□□ -1.44
VPS33A-203ENST00000536212 KCNA2P16389 499 aa6.04□□□□□ -1.44
VPS33A-203ENST00000536212 EIF2AK2P19525 551 aaKnown RBP6.04□□□□□ -1.44
VPS33A-203ENST00000536212 NFKB1P19838 968 aa6.04□□□□□ -1.44
VPS33A-203ENST00000536212 CD33P20138 364 aa6.04□□□□□ -1.44
VPS33A-203ENST00000536212 HSD3B2P26439 372 aa6.04□□□□□ -1.44
VPS33A-203ENST00000536212 CHRNA5P30532 468 aa6.04□□□□□ -1.44
VPS33A-203ENST00000536212 FOXN2P32314 431 aa6.04□□□□□ -1.44
VPS33A-203ENST00000536212 ELF1P32519 619 aa6.04□□□□□ -1.44
VPS33A-203ENST00000536212 ADCY8P40145 1251 aa6.04□□□□□ -1.44
VPS33A-203ENST00000536212 IFNAR2P48551 515 aa6.04□□□□□ -1.44
VPS33A-203ENST00000536212 ALDH5A1P51649 535 aaPredicted RBP6.04□□□□□ -1.44
VPS33A-203ENST00000536212 ZNF132P52740 706 aa6.04□□□□□ -1.44
VPS33A-203ENST00000536212 KCNJ2P63252 427 aa6.04□□□□□ -1.44
VPS33A-203ENST00000536212 MAMLD1Q13495 774 aa6.04□□□□□ -1.44
VPS33A-203ENST00000536212 LRRC14Q15048 493 aa6.04□□□□□ -1.44
VPS33A-203ENST00000536212 KYNUQ16719 465 aa6.04□□□□□ -1.44
VPS33A-203ENST00000536212 FAM133BQ5BKY9 247 aaKnown RBP6.04□□□□□ -1.44
VPS33A-203ENST00000536212 TDRD10Q5VZ19 366 aaKnown RBP6.04□□□□□ -1.44
VPS33A-203ENST00000536212 IZUMO3Q5VZ72 239 aa6.04□□□□□ -1.44
VPS33A-203ENST00000536212 RINLQ6ZS11 566 aa6.04□□□□□ -1.44
VPS33A-203ENST00000536212 NLRX1Q86UT6 975 aa6.04□□□□□ -1.44
VPS33A-203ENST00000536212 TRABD2AQ86V40 505 aa6.04□□□□□ -1.44
VPS33A-203ENST00000536212 VSIG10LQ86VR7 867 aa6.04□□□□□ -1.44
VPS33A-203ENST00000536212 RCOR2Q8IZ40 523 aa6.04□□□□□ -1.44
VPS33A-203ENST00000536212 ANKRD35Q8N283 1001 aa6.04□□□□□ -1.44
VPS33A-203ENST00000536212 AGBL3Q8NEM8 1001 aa6.04□□□□□ -1.44
VPS33A-203ENST00000536212 OR13H1Q8NG92 308 aa6.04□□□□□ -1.44
VPS33A-203ENST00000536212 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.04□□□□□ -1.44
VPS33A-203ENST00000536212 ATP6V0A1Q93050 837 aa6.04□□□□□ -1.44
VPS33A-203ENST00000536212 NKD2Q969F2 451 aaPredicted RBP6.04□□□□□ -1.44
VPS33A-203ENST00000536212 CEP170P1Q96L14 293 aa6.04□□□□□ -1.44
VPS33A-203ENST00000536212 IFT74Q96LB3 600 aa6.04□□□□□ -1.44
VPS33A-203ENST00000536212 CFAP57Q96MR6 1250 aa6.04□□□□□ -1.44
VPS33A-203ENST00000536212 TTC25Q96NG3 672 aa6.04□□□□□ -1.44
VPS33A-203ENST00000536212 PI4K2AQ9BTU6 479 aa6.04□□□□□ -1.44
VPS33A-203ENST00000536212 KIFC3Q9BVG8 833 aa6.04□□□□□ -1.44
VPS33A-203ENST00000536212 ZNF341Q9BYN7 854 aa6.04□□□□□ -1.44
VPS33A-203ENST00000536212 TMEM39BQ9GZU3 492 aa6.04□□□□□ -1.44
VPS33A-203ENST00000536212 CCDC113Q9H0I3 377 aa6.04□□□□□ -1.44
VPS33A-203ENST00000536212 ECT2Q9H8V3 914 aa6.04□□□□□ -1.44
VPS33A-203ENST00000536212 MRPL47Q9HD33 250 aaKnown RBP6.04□□□□□ -1.44
VPS33A-203ENST00000536212 TPSG1Q9NRR2 321 aa6.04□□□□□ -1.44
VPS33A-203ENST00000536212 NKIRAS1Q9NYS0 192 aa6.04□□□□□ -1.44
VPS33A-203ENST00000536212 ZFATQ9P243 1243 aa6.04□□□□□ -1.44
VPS33A-203ENST00000536212 KANSL3Q9P2N6 904 aa6.04□□□□□ -1.44
VPS33A-203ENST00000536212 FRMD4AQ9P2Q2 1039 aaPredicted RBP6.04□□□□□ -1.44
VPS33A-203ENST00000536212 CTNNAL1Q9UBT7 734 aa6.04□□□□□ -1.44
VPS33A-203ENST00000536212 FAM8A1Q9UBU6 413 aa6.04□□□□□ -1.44
VPS33A-203ENST00000536212 FETUBQ9UGM5 382 aa6.04□□□□□ -1.44
VPS33A-203ENST00000536212 IP6K2Q9UHH9 426 aa6.04□□□□□ -1.44
VPS33A-203ENST00000536212 TCEAL9Q9UHQ7 104 aa6.04□□□□□ -1.44
VPS33A-203ENST00000536212 BAIAP2L1Q9UHR4 511 aa6.04□□□□□ -1.44
VPS33A-203ENST00000536212 STARD13Q9Y3M8 1113 aa6.04□□□□□ -1.44
VPS33A-203ENST00000536212 NUB1Q9Y5A7 615 aa6.04□□□□□ -1.44
VPS33A-203ENST00000536212 PSME4Q14997 1843 aa6.04□□□□□ -1.44
VPS33A-203ENST00000536212 CNTNAP2Q9UHC6 1331 aa6.03□□□□□ -1.44
VPS33A-203ENST00000536212 SMCHD1A6NHR9 2005 aa6.03□□□□□ -1.44
VPS33A-203ENST00000536212 TMEM191CA6NGB0 347 aa6.03□□□□□ -1.44
VPS33A-203ENST00000536212 FAM47DPA6NHR8 397 aa6.03□□□□□ -1.44
VPS33A-203ENST00000536212 IGF2BP3O00425 579 aaKnown RBP eCLIP6.03□□□□□ -1.44
VPS33A-203ENST00000536212 ALOX15BO15296 676 aa6.03□□□□□ -1.44
VPS33A-203ENST00000536212 ZBED4O75132 1171 aa6.03□□□□□ -1.44
VPS33A-203ENST00000536212 ATP5HO75947 161 aa6.03□□□□□ -1.44
VPS33A-203ENST00000536212 MAP3K6O95382 1288 aa6.03□□□□□ -1.44
VPS33A-203ENST00000536212 VNN1O95497 513 aa6.03□□□□□ -1.44
VPS33A-203ENST00000536212 ASMTLO95671 621 aa6.03□□□□□ -1.44
VPS33A-203ENST00000536212 CALCAP01258 141 aa6.03□□□□□ -1.44
VPS33A-203ENST00000536212 PSAPP07602 524 aa6.03□□□□□ -1.44
VPS33A-203ENST00000536212 CLTAP09496 248 aa6.03□□□□□ -1.44
VPS33A-203ENST00000536212 CTSHP09668 335 aa6.03□□□□□ -1.44
VPS33A-203ENST00000536212 TMEM191BP0C7N4 346 aa6.03□□□□□ -1.44
VPS33A-203ENST00000536212 MMP8P22894 467 aa6.03□□□□□ -1.44
VPS33A-203ENST00000536212 CCND1P24385 295 aa6.03□□□□□ -1.44
VPS33A-203ENST00000536212 TBXAS1P24557 533 aaPredicted RBP6.03□□□□□ -1.44
VPS33A-203ENST00000536212 GCAP28676 217 aa6.03□□□□□ -1.44
VPS33A-203ENST00000536212 CCND2P30279 289 aa6.03□□□□□ -1.44
VPS33A-203ENST00000536212 STX2P32856 288 aa6.03□□□□□ -1.44
VPS33A-203ENST00000536212 CDH5P33151 784 aaPredicted RBP6.03□□□□□ -1.44
VPS33A-203ENST00000536212 NF2P35240 595 aa6.03□□□□□ -1.44
VPS33A-203ENST00000536212 CETN2P41208 172 aa6.03□□□□□ -1.44
VPS33A-203ENST00000536212 MAGEA4P43358 317 aa6.03□□□□□ -1.44
VPS33A-203ENST00000536212 NSFP46459 744 aaKnown RBP6.03□□□□□ -1.44
VPS33A-203ENST00000536212 CCNG1P51959 295 aa6.03□□□□□ -1.44
VPS33A-203ENST00000536212 YARSP54577 528 aaKnown RBP6.03□□□□□ -1.44
VPS33A-203ENST00000536212 SLC8A3P57103 927 aa6.03□□□□□ -1.44
VPS33A-203ENST00000536212 IL9RQ01113 521 aa6.03□□□□□ -1.44
VPS33A-203ENST00000536212 MCL1Q07820 350 aa6.03□□□□□ -1.44
VPS33A-203ENST00000536212 MGAT5Q09328 741 aa6.03□□□□□ -1.44
VPS33A-203ENST00000536212 MTA1Q13330 715 aa6.03□□□□□ -1.44
VPS33A-203ENST00000536212 CUL2Q13617 745 aa6.03□□□□□ -1.44
VPS33A-203ENST00000536212 TRIP13Q15645 432 aaPredicted RBP6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms