RNA–Protein interactions for RNA: ENST00000535897.1

CHFR-211, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 4

Gene CHFR, Length 587 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-211ENST00000535897 HPDLQ96IR7 371 aa8.59□□□□□ -1.03
CHFR-211ENST00000535897 ACCSQ96QU6 501 aa8.59□□□□□ -1.03
CHFR-211ENST00000535897 MMS19Q96T76 1030 aa8.59□□□□□ -1.03
CHFR-211ENST00000535897 PKMYT1Q99640 499 aa8.59□□□□□ -1.03
CHFR-211ENST00000535897 MTMR12Q9C0I1 747 aa8.59□□□□□ -1.03
CHFR-211ENST00000535897 PDE11AQ9HCR9 933 aa8.59□□□□□ -1.03
CHFR-211ENST00000535897 FSCN3Q9NQT6 498 aa8.59□□□□□ -1.03
CHFR-211ENST00000535897 GDAP2Q9NXN4 497 aa8.59□□□□□ -1.03
CHFR-211ENST00000535897 CFAP97Q9P2B7 532 aa8.59□□□□□ -1.03
CHFR-211ENST00000535897 IGSF10Q6WRI0 2623 aa8.59□□□□□ -1.03
CHFR-211ENST00000535897 TNRC6BQ9UPQ9 1833 aaKnown RBP8.59□□□□□ -1.03
CHFR-211ENST00000535897 GON4LQ3T8J9 2241 aa8.58□□□□□ -1.04
CHFR-211ENST00000535897 PTPRDP23468 1912 aa8.58□□□□□ -1.04
CHFR-211ENST00000535897 FREM2Q5SZK8 3169 aa8.58□□□□□ -1.04
CHFR-211ENST00000535897 TBC1D3BA6NDS4 549 aa8.58□□□□□ -1.04
CHFR-211ENST00000535897 H0Y626 953 aa8.58□□□□□ -1.04
CHFR-211ENST00000535897 TRIM66O15016 1216 aa8.58□□□□□ -1.04
CHFR-211ENST00000535897 ZBTB24O43167 697 aaPredicted RBP8.58□□□□□ -1.04
CHFR-211ENST00000535897 AP5Z1O43299 807 aa8.58□□□□□ -1.04
CHFR-211ENST00000535897 OPHN1O60890 802 aa8.58□□□□□ -1.04
CHFR-211ENST00000535897 CLSTN1O94985 981 aa8.58□□□□□ -1.04
CHFR-211ENST00000535897 TRIM16O95361 564 aa8.58□□□□□ -1.04
CHFR-211ENST00000535897 TNNC2P02585 160 aa8.58□□□□□ -1.04
CHFR-211ENST00000535897 MBL2P11226 248 aaPredicted RBP8.58□□□□□ -1.04
CHFR-211ENST00000535897 ADH5P11766 374 aa8.58□□□□□ -1.04
CHFR-211ENST00000535897 IDEP14735 1019 aa8.58□□□□□ -1.04
CHFR-211ENST00000535897 TCF3P15923 654 aa8.58□□□□□ -1.04
CHFR-211ENST00000535897 GAP43P17677 238 aa8.58□□□□□ -1.04
CHFR-211ENST00000535897 PFKLP17858 780 aa8.58□□□□□ -1.04
CHFR-211ENST00000535897 LMO2P25791 158 aa8.58□□□□□ -1.04
CHFR-211ENST00000535897 GJB2P29033 226 aa8.58□□□□□ -1.04
CHFR-211ENST00000535897 GRIA2P42262 883 aa8.58□□□□□ -1.04
CHFR-211ENST00000535897 PI4KAP42356 2102 aa8.58□□□□□ -1.04
CHFR-211ENST00000535897 ZXDBP98169 803 aa8.58□□□□□ -1.04
CHFR-211ENST00000535897 GRIN1Q05586 938 aa8.58□□□□□ -1.04
CHFR-211ENST00000535897 GAB4Q2WGN9 574 aa8.58□□□□□ -1.04
CHFR-211ENST00000535897 HSF5Q4G112 596 aaPredicted RBP8.58□□□□□ -1.04
CHFR-211ENST00000535897 L1TD1Q5T7N2 865 aaKnown RBP8.58□□□□□ -1.04
CHFR-211ENST00000535897 EMC10Q5UCC4 262 aa8.58□□□□□ -1.04
CHFR-211ENST00000535897 TDRD10Q5VZ19 366 aaKnown RBP8.58□□□□□ -1.04
CHFR-211ENST00000535897 BTBD8Q5XKL5 378 aa8.58□□□□□ -1.04
CHFR-211ENST00000535897 SCARA3Q6AZY7 606 aa8.58□□□□□ -1.04
CHFR-211ENST00000535897 SLC23A3Q6PIS1 610 aa8.58□□□□□ -1.04
CHFR-211ENST00000535897 ADGRG2Q8IZP9 1017 aa8.58□□□□□ -1.04
CHFR-211ENST00000535897 CHCHD4Q8N4Q1 142 aa8.58□□□□□ -1.04
CHFR-211ENST00000535897 ZSWIM2Q8NEG5 633 aa8.58□□□□□ -1.04
CHFR-211ENST00000535897 ANKRD36BP1Q96IX9 119 aa8.58□□□□□ -1.04
CHFR-211ENST00000535897 SPATA17Q96L03 361 aa8.58□□□□□ -1.04
CHFR-211ENST00000535897 SLITRK1Q96PX8 696 aa8.58□□□□□ -1.04
CHFR-211ENST00000535897 RNF38Q9H0F5 515 aa8.58□□□□□ -1.04
CHFR-211ENST00000535897 SNX25Q9H3E2 840 aa8.58□□□□□ -1.04
CHFR-211ENST00000535897 PCIF1Q9H4Z3 704 aa8.58□□□□□ -1.04
CHFR-211ENST00000535897 SEL1LQ9UBV2 794 aa8.58□□□□□ -1.04
CHFR-211ENST00000535897 CCDC39Q9UFE4 941 aa8.58□□□□□ -1.04
CHFR-211ENST00000535897 MBD1Q9UIS9 605 aaPredicted RBP8.58□□□□□ -1.04
CHFR-211ENST00000535897 PILRBQ9UKJ0 227 aa8.58□□□□□ -1.04
CHFR-211ENST00000535897 CDH9Q9ULB4 789 aa8.58□□□□□ -1.04
CHFR-211ENST00000535897 SLC6A14Q9UN76 642 aa8.58□□□□□ -1.04
CHFR-211ENST00000535897 MSRB2Q9Y3D2 182 aa8.58□□□□□ -1.04
CHFR-211ENST00000535897 CEP192Q8TEP8 1941 aa8.57□□□□□ -1.04
CHFR-211ENST00000535897 ZNF840PA6NDX5 716 aa8.57□□□□□ -1.04
CHFR-211ENST00000535897 F8VP50 259 aa8.57□□□□□ -1.04
CHFR-211ENST00000535897 GABRDO14764 452 aa8.57□□□□□ -1.04
CHFR-211ENST00000535897 PPP1R37O75864 691 aa8.57□□□□□ -1.04
CHFR-211ENST00000535897 BMP15O95972 392 aa8.57□□□□□ -1.04
CHFR-211ENST00000535897 CENPBP07199 599 aaPredicted RBP8.57□□□□□ -1.04
CHFR-211ENST00000535897 GARTP22102 1010 aa8.57□□□□□ -1.04
CHFR-211ENST00000535897 HOXD12P35452 270 aa8.57□□□□□ -1.04
CHFR-211ENST00000535897 TXLNAP40222 546 aa8.57□□□□□ -1.04
CHFR-211ENST00000535897 EIF2DP41214 584 aaKnown RBP8.57□□□□□ -1.04
CHFR-211ENST00000535897 TNFRSF4P43489 277 aa8.57□□□□□ -1.04
CHFR-211ENST00000535897 PPP3CCP48454 512 aa8.57□□□□□ -1.04
CHFR-211ENST00000535897 SLC7A9P82251 487 aa8.57□□□□□ -1.04
CHFR-211ENST00000535897 MESP2Q0VG99 397 aa8.57□□□□□ -1.04
CHFR-211ENST00000535897 SEMA3BQ13214 749 aa8.57□□□□□ -1.04
CHFR-211ENST00000535897 DUOXA1Q1HG43 343 aa8.57□□□□□ -1.04
CHFR-211ENST00000535897 ANO4Q32M45 955 aa8.57□□□□□ -1.04
CHFR-211ENST00000535897 MAP7D1Q3KQU3 841 aa8.57□□□□□ -1.04
CHFR-211ENST00000535897 MDH1BQ5I0G3 518 aa8.57□□□□□ -1.04
CHFR-211ENST00000535897 SPDYCQ5MJ68 293 aa8.57□□□□□ -1.04
CHFR-211ENST00000535897 LY6G5CQ5SRR4 150 aa8.57□□□□□ -1.04
CHFR-211ENST00000535897 C10orf76Q5T2E6 689 aa8.57□□□□□ -1.04
CHFR-211ENST00000535897 FAM171BQ6P995 826 aa8.57□□□□□ -1.04
CHFR-211ENST00000535897 NUDT18Q6ZVK8 323 aa8.57□□□□□ -1.04
CHFR-211ENST00000535897 DPH6Q7L8W6 267 aa8.57□□□□□ -1.04
CHFR-211ENST00000535897 TRMT11Q7Z4G4 463 aaKnown RBP8.57□□□□□ -1.04
CHFR-211ENST00000535897 RABEPKQ7Z6M1 372 aa8.57□□□□□ -1.04
CHFR-211ENST00000535897 C12orf40Q86WS4 652 aa8.57□□□□□ -1.04
CHFR-211ENST00000535897 DDX42Q86XP3 938 aaKnown RBP eCLIP8.57□□□□□ -1.04
CHFR-211ENST00000535897 MINDY1Q8N5J2 469 aa8.57□□□□□ -1.04
CHFR-211ENST00000535897 ZNF513Q8N8E2 541 aaPredicted RBP8.57□□□□□ -1.04
CHFR-211ENST00000535897 NAT16Q8N8M0 369 aa8.57□□□□□ -1.04
CHFR-211ENST00000535897 OR2I1PQ8NGU4 316 aa8.57□□□□□ -1.04
CHFR-211ENST00000535897 CEP76Q8TAP6 659 aa8.57□□□□□ -1.04
CHFR-211ENST00000535897 MYCBPAPQ8TBZ2 947 aa8.57□□□□□ -1.04
CHFR-211ENST00000535897 KBTBD7Q8WVZ9 684 aa8.57□□□□□ -1.04
CHFR-211ENST00000535897 ERLEC1Q96DZ1 483 aa8.57□□□□□ -1.04
CHFR-211ENST00000535897 PCED1BQ96HM7 432 aa8.57□□□□□ -1.04
CHFR-211ENST00000535897 EPSTI1Q96J88 318 aa8.57□□□□□ -1.04
CHFR-211ENST00000535897 CEP295NLQ96MC4 621 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms