RNA–Protein interactions for RNA: ENST00000535871.1

CDCA3-205, Transcript of cell division cycle associated 3, humanhuman

TSL 5

Gene CDCA3, Length 454 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-205ENST00000535871 ABL1P00519 1130 aa6.84□□□□□ -1.31
CDCA3-205ENST00000535871 ITGB1P05556 798 aa6.84□□□□□ -1.31
CDCA3-205ENST00000535871 POU2F2P09086 479 aa6.84□□□□□ -1.31
CDCA3-205ENST00000535871 PDGFRBP09619 1106 aa6.84□□□□□ -1.31
CDCA3-205ENST00000535871 ACRP10323 421 aa6.84□□□□□ -1.31
CDCA3-205ENST00000535871 CTSAP10619 480 aa6.84□□□□□ -1.31
CDCA3-205ENST00000535871 TNNT1P13805 278 aa6.84□□□□□ -1.31
CDCA3-205ENST00000535871 TCP1P17987 556 aaKnown RBP6.84□□□□□ -1.31
CDCA3-205ENST00000535871 BMPR1AP36894 532 aa6.84□□□□□ -1.31
CDCA3-205ENST00000535871 BRCC3P46736 316 aa6.84□□□□□ -1.31
CDCA3-205ENST00000535871 RAP1GAPP47736 663 aa6.84□□□□□ -1.31
CDCA3-205ENST00000535871 PPP3CCP48454 512 aa6.84□□□□□ -1.31
CDCA3-205ENST00000535871 TUFMP49411 452 aaKnown RBP6.84□□□□□ -1.31
CDCA3-205ENST00000535871 GLUD2P49448 558 aa6.84□□□□□ -1.31
CDCA3-205ENST00000535871 RPL10AP62906 217 aaKnown RBP6.84□□□□□ -1.31
CDCA3-205ENST00000535871 ITIH3Q06033 890 aa6.84□□□□□ -1.31
CDCA3-205ENST00000535871 MAMLD1Q13495 774 aa6.84□□□□□ -1.31
CDCA3-205ENST00000535871 RAB33AQ14088 237 aa6.84□□□□□ -1.31
CDCA3-205ENST00000535871 GOLGA7BQ2TAP0 167 aa6.84□□□□□ -1.31
CDCA3-205ENST00000535871 PTPN20Q4JDL3 420 aa6.84□□□□□ -1.31
CDCA3-205ENST00000535871 EFHC1Q5JVL4 640 aa6.84□□□□□ -1.31
CDCA3-205ENST00000535871 FAM171A1Q5VUB5 890 aa6.84□□□□□ -1.31
CDCA3-205ENST00000535871 KIAA0319Q5VV43 1072 aa6.84□□□□□ -1.31
CDCA3-205ENST00000535871 TAF3Q5VWG9 929 aa6.84□□□□□ -1.31
CDCA3-205ENST00000535871 KIAA1841Q6NSI8 718 aa6.84□□□□□ -1.31
CDCA3-205ENST00000535871 DENND1BQ6P3S1 775 aa6.84□□□□□ -1.31
CDCA3-205ENST00000535871 BLOC1S3Q6QNY0 202 aa6.84□□□□□ -1.31
CDCA3-205ENST00000535871 CLEC20AQ6ZU45 233 aa6.84□□□□□ -1.31
CDCA3-205ENST00000535871 PAQR9Q6ZVX9 377 aa6.84□□□□□ -1.31
CDCA3-205ENST00000535871 POLNQ7Z5Q5 900 aa6.84□□□□□ -1.31
CDCA3-205ENST00000535871 FAM35AQ86V20 835 aa6.84□□□□□ -1.31
CDCA3-205ENST00000535871 LAPTM4BQ86VI4 370 aa6.84□□□□□ -1.31
CDCA3-205ENST00000535871 OSTM1Q86WC4 334 aa6.84□□□□□ -1.31
CDCA3-205ENST00000535871 TTC30AQ86WT1 665 aa6.84□□□□□ -1.31
CDCA3-205ENST00000535871 PSTKQ8IV42 348 aaKnown RBP6.84□□□□□ -1.31
CDCA3-205ENST00000535871 ARHGAP18Q8N392 663 aa6.84□□□□□ -1.31
CDCA3-205ENST00000535871 C12orf29Q8N999 325 aa6.84□□□□□ -1.31
CDCA3-205ENST00000535871 GADD45GIP1Q8TAE8 222 aaPredicted RBP6.84□□□□□ -1.31
CDCA3-205ENST00000535871 ZNF461Q8TAF7 563 aa6.84□□□□□ -1.31
CDCA3-205ENST00000535871 FEZF2Q8TBJ5 459 aa6.84□□□□□ -1.31
CDCA3-205ENST00000535871 SLC2A14Q8TDB8 520 aa6.84□□□□□ -1.31
CDCA3-205ENST00000535871 HDAC7Q8WUI4 952 aa6.84□□□□□ -1.31
CDCA3-205ENST00000535871 CPA5Q8WXQ8 436 aa6.84□□□□□ -1.31
CDCA3-205ENST00000535871 OVCA2Q8WZ82 227 aa6.84□□□□□ -1.31
CDCA3-205ENST00000535871 DPF3Q92784 378 aa6.84□□□□□ -1.31
CDCA3-205ENST00000535871 ZNF653Q96CK0 615 aa6.84□□□□□ -1.31
CDCA3-205ENST00000535871 CPXM1Q96SM3 734 aa6.84□□□□□ -1.31
CDCA3-205ENST00000535871 NAPGQ99747 312 aaPredicted RBP6.84□□□□□ -1.31
CDCA3-205ENST00000535871 GDF15Q99988 308 aa6.84□□□□□ -1.31
CDCA3-205ENST00000535871 C11orf84Q9BUA3 381 aaPredicted RBP6.84□□□□□ -1.31
CDCA3-205ENST00000535871 PRR14Q9BWN1 585 aa6.84□□□□□ -1.31
CDCA3-205ENST00000535871 LMAN2LQ9H0V9 348 aa6.84□□□□□ -1.31
CDCA3-205ENST00000535871 THAP2Q9H0W7 228 aa6.84□□□□□ -1.31
CDCA3-205ENST00000535871 FBXO44Q9H4M3 255 aa6.84□□□□□ -1.31
CDCA3-205ENST00000535871 PRDM16Q9HAZ2 1276 aa6.84□□□□□ -1.31
CDCA3-205ENST00000535871 ACP6Q9NPH0 428 aa6.84□□□□□ -1.31
CDCA3-205ENST00000535871 LZTFL1Q9NQ48 299 aa6.84□□□□□ -1.31
CDCA3-205ENST00000535871 UTP3Q9NQZ2 479 aaKnown RBP eCLIP6.84□□□□□ -1.318e-7■■■■■ 69.9
CDCA3-205ENST00000535871 MRPL17Q9NRX2 175 aaKnown RBP6.84□□□□□ -1.31
CDCA3-205ENST00000535871 SEPT11Q9NVA2 429 aaKnown RBP6.84□□□□□ -1.31
CDCA3-205ENST00000535871 DNAAF2Q9NVR5 837 aaKnown RBP6.84□□□□□ -1.31
CDCA3-205ENST00000535871 TRMT1Q9NXH9 659 aaKnown RBP6.84□□□□□ -1.31
CDCA3-205ENST00000535871 TAS2R14Q9NYV8 317 aa6.84□□□□□ -1.31
CDCA3-205ENST00000535871 CNOT8Q9UFF9 292 aaKnown RBP6.84□□□□□ -1.31
CDCA3-205ENST00000535871 AFF4Q9UHB7 1163 aaKnown RBP6.84□□□□□ -1.31
CDCA3-205ENST00000535871 IP6K2Q9UHH9 426 aa6.84□□□□□ -1.31
CDCA3-205ENST00000535871 GUCA1BQ9UMX6 200 aa6.84□□□□□ -1.31
CDCA3-205ENST00000535871 PRG3Q9Y2Y8 225 aaPredicted RBP6.84□□□□□ -1.31
CDCA3-205ENST00000535871 NME7Q9Y5B8 376 aa6.84□□□□□ -1.31
CDCA3-205ENST00000535871 PCDHB5Q9Y5E4 795 aa6.84□□□□□ -1.31
CDCA3-205ENST00000535871 MRPL42Q9Y6G3 142 aaKnown RBP6.84□□□□□ -1.31
CDCA3-205ENST00000535871 USP3Q9Y6I4 520 aa6.84□□□□□ -1.31
CDCA3-205ENST00000535871 VWA8A3KMH1 1905 aa6.84□□□□□ -1.32
CDCA3-205ENST00000535871 HSFX4A0A1B0GTS1 333 aaPredicted RBP6.83□□□□□ -1.32
CDCA3-205ENST00000535871 HSFX3A0A1B0GWH4 333 aaPredicted RBP6.83□□□□□ -1.32
CDCA3-205ENST00000535871 CCDC66A2RUB6 948 aa6.83□□□□□ -1.32
CDCA3-205ENST00000535871 MYBPHLA2RUH7 354 aa6.83□□□□□ -1.32
CDCA3-205ENST00000535871 ANKRD33BA6NCL7 494 aa6.83□□□□□ -1.32
CDCA3-205ENST00000535871 USP27XA6NNY8 438 aa6.83□□□□□ -1.32
CDCA3-205ENST00000535871 SOBPA7XYQ1 873 aa6.83□□□□□ -1.32
CDCA3-205ENST00000535871 ZNF487B1APH4 448 aa6.83□□□□□ -1.32
CDCA3-205ENST00000535871 ARHGAP33O14559 1287 aa6.83□□□□□ -1.32
CDCA3-205ENST00000535871 HSF2BPO75031 334 aa6.83□□□□□ -1.32
CDCA3-205ENST00000535871 FGF18O76093 207 aa6.83□□□□□ -1.32
CDCA3-205ENST00000535871 PROSCO94903 275 aa6.83□□□□□ -1.32
CDCA3-205ENST00000535871 UPP2O95045 317 aa6.83□□□□□ -1.32
CDCA3-205ENST00000535871 RTN3O95197 1032 aaPredicted RBP6.83□□□□□ -1.32
CDCA3-205ENST00000535871 URODP06132 367 aa6.83□□□□□ -1.32
CDCA3-205ENST00000535871 KRT3P12035 628 aa6.83□□□□□ -1.32
CDCA3-205ENST00000535871 ATF2P15336 505 aa6.83□□□□□ -1.32
CDCA3-205ENST00000535871 JUNDP17535 347 aa6.83□□□□□ -1.32
CDCA3-205ENST00000535871 PFKLP17858 780 aa6.83□□□□□ -1.32
CDCA3-205ENST00000535871 RRM1P23921 792 aa6.83□□□□□ -1.32
CDCA3-205ENST00000535871 TKTP29401 623 aaKnown RBP6.83□□□□□ -1.32
CDCA3-205ENST00000535871 PCK1P35558 622 aa6.83□□□□□ -1.32
CDCA3-205ENST00000535871 PTPN9P43378 593 aa6.83□□□□□ -1.32
CDCA3-205ENST00000535871 NDUFV1P49821 464 aa6.83□□□□□ -1.32
CDCA3-205ENST00000535871 ATP1A2P50993 1020 aa6.83□□□□□ -1.32
CDCA3-205ENST00000535871 ZNF135P52742 658 aaPredicted RBP6.83□□□□□ -1.32
CDCA3-205ENST00000535871 EPHB4P54760 987 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms