RNA–Protein interactions for RNA: ENST00000535222.5

CPSF7-214, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 940 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-214ENST00000535222 MCM4P33991 863 aa8.12□□□□□ -1.11
CPSF7-214ENST00000535222 TNFSF9P41273 254 aa8.12□□□□□ -1.11
CPSF7-214ENST00000535222 ORC1Q13415 861 aa8.12□□□□□ -1.11
CPSF7-214ENST00000535222 PRPF4BQ13523 1007 aaKnown RBP8.12□□□□□ -1.11
CPSF7-214ENST00000535222 SGO2Q562F6 1265 aa8.12□□□□□ -1.11
CPSF7-214ENST00000535222 XKR9Q5GH70 373 aa8.12□□□□□ -1.11
CPSF7-214ENST00000535222 CWC27Q6UX04 472 aaKnown RBP8.12□□□□□ -1.11
CPSF7-214ENST00000535222 RALYLQ86SE5 291 aaKnown RBP8.12□□□□□ -1.11
CPSF7-214ENST00000535222 REXO1Q8N1G1 1221 aaKnown RBP8.12□□□□□ -1.11
CPSF7-214ENST00000535222 PIGOQ8TEQ8 1089 aa8.12□□□□□ -1.11
CPSF7-214ENST00000535222 C2orf15Q8WU43 125 aaKnown RBP8.12□□□□□ -1.11
CPSF7-214ENST00000535222 SGF29Q96ES7 293 aa8.12□□□□□ -1.11
CPSF7-214ENST00000535222 TRMT2BQ96GJ1 504 aaKnown RBP8.12□□□□□ -1.11
CPSF7-214ENST00000535222 PRR11Q96HE9 360 aaPredicted RBP8.12□□□□□ -1.11
CPSF7-214ENST00000535222 ARHGAP9Q9BRR9 750 aa8.12□□□□□ -1.11
CPSF7-214ENST00000535222 CCDC113Q9H0I3 377 aa8.12□□□□□ -1.11
CPSF7-214ENST00000535222 ADNPQ9H2P0 1102 aa8.12□□□□□ -1.11
CPSF7-214ENST00000535222 TM9SF3Q9HD45 589 aa8.12□□□□□ -1.11
CPSF7-214ENST00000535222 BMP2KQ9NSY1 1161 aaPredicted RBP8.12□□□□□ -1.11
CPSF7-214ENST00000535222 CNTN3Q9P232 1028 aa8.12□□□□□ -1.11
CPSF7-214ENST00000535222 ATXN7L1Q9ULK2 861 aaPredicted RBP8.12□□□□□ -1.11
CPSF7-214ENST00000535222 TAF6LQ9Y6J9 622 aa8.12□□□□□ -1.11
CPSF7-214ENST00000535222 V9GY48 417 aaPredicted RBP8.12□□□□□ -1.11
CPSF7-214ENST00000535222 TACC2O95359 2948 aa8.12□□□□□ -1.11
CPSF7-214ENST00000535222 PRRC2CQ9Y520 2896 aaKnown RBP8.11□□□□□ -1.11
CPSF7-214ENST00000535222 TRAV19A0A0A6YYK7 116 aa8.11□□□□□ -1.11
CPSF7-214ENST00000535222 VPS37CA5D8V6 355 aaPredicted RBP8.11□□□□□ -1.11
CPSF7-214ENST00000535222 TBC1D3BA6NDS4 549 aa8.11□□□□□ -1.11
CPSF7-214ENST00000535222 LAD1O00515 517 aa8.11□□□□□ -1.11
CPSF7-214ENST00000535222 LYPLA2O95372 231 aa8.11□□□□□ -1.11
CPSF7-214ENST00000535222 EDN1P05305 212 aa8.11□□□□□ -1.11
CPSF7-214ENST00000535222 HAPLN1P10915 354 aaPredicted RBP8.11□□□□□ -1.11
CPSF7-214ENST00000535222 GRM5P41594 1212 aa8.11□□□□□ -1.11
CPSF7-214ENST00000535222 RESTQ13127 1097 aa8.11□□□□□ -1.11
CPSF7-214ENST00000535222 DMP1Q13316 513 aaPredicted RBP8.11□□□□□ -1.11
CPSF7-214ENST00000535222 TAF12Q16514 161 aa8.11□□□□□ -1.11
CPSF7-214ENST00000535222 TBR1Q16650 682 aa8.11□□□□□ -1.11
CPSF7-214ENST00000535222 SKIDA1Q1XH10 827 aa8.11□□□□□ -1.11
CPSF7-214ENST00000535222 ZC2HC1CQ53FD0 456 aaPredicted RBP8.11□□□□□ -1.11
CPSF7-214ENST00000535222 SFMBT2Q5VUG0 894 aa8.11□□□□□ -1.11
CPSF7-214ENST00000535222 C1QL3Q5VWW1 255 aa8.11□□□□□ -1.11
CPSF7-214ENST00000535222 KDM7AQ6ZMT4 941 aa8.11□□□□□ -1.11
CPSF7-214ENST00000535222 CLEC14AQ86T13 490 aa8.11□□□□□ -1.11
CPSF7-214ENST00000535222 GIPC2Q8TF65 315 aa8.11□□□□□ -1.11
CPSF7-214ENST00000535222 TMEM87BQ96K49 555 aa8.11□□□□□ -1.11
CPSF7-214ENST00000535222 ELF4Q99607 663 aaPredicted RBP8.11□□□□□ -1.11
CPSF7-214ENST00000535222 ORAI3Q9BRQ5 295 aa8.11□□□□□ -1.11
CPSF7-214ENST00000535222 C6orf50Q9HD87 102 aa8.11□□□□□ -1.11
CPSF7-214ENST00000535222 TOPORSQ9NS56 1045 aaPredicted RBP8.11□□□□□ -1.11
CPSF7-214ENST00000535222 CUEDC1Q9NWM3 386 aaPredicted RBP8.11□□□□□ -1.11
CPSF7-214ENST00000535222 VAV3Q9UKW4 847 aa8.11□□□□□ -1.11
CPSF7-214ENST00000535222 PCDHGA8Q9Y5G5 932 aa8.11□□□□□ -1.11
CPSF7-214ENST00000535222 TIMM13Q9Y5L4 95 aaPredicted RBP8.11□□□□□ -1.11
CPSF7-214ENST00000535222 A0A1W2PNU3 283 aaPredicted RBP8.1□□□□□ -1.11
CPSF7-214ENST00000535222 CCDC69A6NI79 296 aa8.1□□□□□ -1.11
CPSF7-214ENST00000535222 YKT6O15498 198 aa8.1□□□□□ -1.11
CPSF7-214ENST00000535222 USP12O75317 370 aa8.1□□□□□ -1.11
CPSF7-214ENST00000535222 NOL4O94818 638 aa8.1□□□□□ -1.11
CPSF7-214ENST00000535222 CSH1P0DML2 217 aa8.1□□□□□ -1.11
CPSF7-214ENST00000535222 CSH2P0DML3 217 aa8.1□□□□□ -1.11
CPSF7-214ENST00000535222 ATP2B1P20020 1258 aa8.1□□□□□ -1.11
CPSF7-214ENST00000535222 GNA11P29992 359 aa8.1□□□□□ -1.11
CPSF7-214ENST00000535222 LRPAP1P30533 357 aa8.1□□□□□ -1.11
CPSF7-214ENST00000535222 MLLT3P42568 568 aaPredicted RBP8.1□□□□□ -1.11
CPSF7-214ENST00000535222 DUSP3P51452 185 aaPredicted RBP8.1□□□□□ -1.11
CPSF7-214ENST00000535222 TPMTP51580 245 aa8.1□□□□□ -1.11
CPSF7-214ENST00000535222 ZNF132P52740 706 aa8.1□□□□□ -1.11
CPSF7-214ENST00000535222 MORC3Q14149 939 aa8.1□□□□□ -1.11
CPSF7-214ENST00000535222 NUMA1Q14980 2115 aa8.1□□□□□ -1.11
CPSF7-214ENST00000535222 PROX2Q3B8N5 592 aa8.1□□□□□ -1.11
CPSF7-214ENST00000535222 MGAT5BQ3V5L5 792 aa8.1□□□□□ -1.11
CPSF7-214ENST00000535222 OVOS1Q6IE37 1185 aa8.1□□□□□ -1.11
CPSF7-214ENST00000535222 ARMCX5Q6P1M9 558 aa8.1□□□□□ -1.11
CPSF7-214ENST00000535222 MOXD1Q6UVY6 613 aa8.1□□□□□ -1.11
CPSF7-214ENST00000535222 ZC3H18Q86VM9 953 aaKnown RBP8.1□□□□□ -1.11
CPSF7-214ENST00000535222 GATAD2AQ86YP4 633 aa8.1□□□□□ -1.11
CPSF7-214ENST00000535222 SRRM1Q8IYB3 904 aaKnown RBP8.1□□□□□ -1.11
CPSF7-214ENST00000535222 TERB1Q8NA31 727 aa8.1□□□□□ -1.11
CPSF7-214ENST00000535222 SPPL2BQ8TCT7 592 aa8.1□□□□□ -1.11
CPSF7-214ENST00000535222 SSC4DQ8WTU2 575 aa8.1□□□□□ -1.11
CPSF7-214ENST00000535222 C18orf25Q96B23 403 aaPredicted RBP8.1□□□□□ -1.11
CPSF7-214ENST00000535222 ACOX2Q99424 681 aa8.1□□□□□ -1.11
CPSF7-214ENST00000535222 SEPT5Q99719 369 aaPredicted RBP8.1□□□□□ -1.11
CPSF7-214ENST00000535222 DUSP9Q99956 384 aaKnown RBP8.1□□□□□ -1.11
CPSF7-214ENST00000535222 LXNQ9BS40 222 aa8.1□□□□□ -1.11
CPSF7-214ENST00000535222 NUP58Q9BVL2 599 aa8.1□□□□□ -1.11
CPSF7-214ENST00000535222 ZCWPW1Q9H0M4 648 aa8.1□□□□□ -1.11
CPSF7-214ENST00000535222 SLC6A17Q9H1V8 727 aa8.1□□□□□ -1.11
CPSF7-214ENST00000535222 C2orf40Q9H1Z8 148 aa8.1□□□□□ -1.11
CPSF7-214ENST00000535222 ZSWIM4Q9H7M6 989 aa8.1□□□□□ -1.11
CPSF7-214ENST00000535222 PTPRHQ9HD43 1115 aa8.1□□□□□ -1.11
CPSF7-214ENST00000535222 UXTQ9UBK9 157 aaPredicted RBP8.1□□□□□ -1.11
CPSF7-214ENST00000535222 TUBD1Q9UJT1 453 aa8.1□□□□□ -1.11
CPSF7-214ENST00000535222 LRRK1Q38SD2 2015 aa8.1□□□□□ -1.11
CPSF7-214ENST00000535222 ANAPC1Q9H1A4 1944 aa8.09□□□□□ -1.11
CPSF7-214ENST00000535222 BTBD18B2RXH4 712 aa8.09□□□□□ -1.11
CPSF7-214ENST00000535222 HIP1O00291 1037 aa8.09□□□□□ -1.11
CPSF7-214ENST00000535222 LEFTY2O00292 366 aa8.09□□□□□ -1.11
CPSF7-214ENST00000535222 SLC9A3R1O14745 358 aaPredicted RBP8.09□□□□□ -1.11
CPSF7-214ENST00000535222 VILLO15195 856 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms