RNA–Protein interactions for RNA: ENST00000534885.5

TNFRSF1A-205, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 1 (best)

Gene TNFRSF1A, Length 2,069 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-205ENST00000534885 MRPL58Q14197 206 aaKnown RBP21.35■■□□□ 1.01
TNFRSF1A-205ENST00000534885 MAPRE1Q15691 268 aaKnown RBP21.35■■□□□ 1.01
TNFRSF1A-205ENST00000534885 SLC39A12Q504Y0 691 aa21.35■■□□□ 1.01
TNFRSF1A-205ENST00000534885 RHOT1Q8IXI2 618 aa21.35■■□□□ 1.01
TNFRSF1A-205ENST00000534885 RXFP2Q8WXD0 754 aa21.35■■□□□ 1.01
TNFRSF1A-205ENST00000534885 NDRG1Q92597 394 aaKnown RBP21.35■■□□□ 1.01
TNFRSF1A-205ENST00000534885 ZCWPW1Q9H0M4 648 aa21.35■■□□□ 1.01
TNFRSF1A-205ENST00000534885 LRRC4Q9HBW1 653 aa21.35■■□□□ 1.01
TNFRSF1A-205ENST00000534885 CSNK1G1Q9HCP0 422 aa21.35■■□□□ 1.01
TNFRSF1A-205ENST00000534885 PSTPIP1O43586 416 aa21.35■■□□□ 1.01
TNFRSF1A-205ENST00000534885 LRCH4O75427 683 aa21.35■■□□□ 1.01
TNFRSF1A-205ENST00000534885 BAIAP3O94812 1187 aa21.35■■□□□ 1.01
TNFRSF1A-205ENST00000534885 FGGP02679 453 aa21.35■■□□□ 1.01
TNFRSF1A-205ENST00000534885 ADCY1Q08828 1119 aa21.35■■□□□ 1.01
TNFRSF1A-205ENST00000534885 CTXN3Q4LDR2 81 aa21.35■■□□□ 1.01
TNFRSF1A-205ENST00000534885 RTP2Q5QGT7 225 aa21.35■■□□□ 1.01
TNFRSF1A-205ENST00000534885 SLC26A9Q7LBE3 791 aa21.35■■□□□ 1.01
TNFRSF1A-205ENST00000534885 HHLA1C9JL84 531 aa21.34■■□□□ 1.01
TNFRSF1A-205ENST00000534885 CAPN15O75808 1086 aa21.34■■□□□ 1.01
TNFRSF1A-205ENST00000534885 PDGFRAP16234 1089 aa21.34■■□□□ 1.01
TNFRSF1A-205ENST00000534885 GPD1P21695 349 aa21.34■■□□□ 1.01
TNFRSF1A-205ENST00000534885 ZNF143P52747 638 aaPredicted RBP21.34■■□□□ 1.01
TNFRSF1A-205ENST00000534885 ITIH3Q06033 890 aa21.34■■□□□ 1.01
TNFRSF1A-205ENST00000534885 ATP13A4Q4VNC1 1196 aa21.34■■□□□ 1.01
TNFRSF1A-205ENST00000534885 SH3PXD2AQ5TCZ1 1133 aa21.34■■□□□ 1.01
TNFRSF1A-205ENST00000534885 TXNRD3NBQ6F5E7 133 aa21.34■■□□□ 1.01
TNFRSF1A-205ENST00000534885 C7orf61Q8IZ16 206 aa21.34■■□□□ 1.01
TNFRSF1A-205ENST00000534885 CFAP57Q96MR6 1250 aa21.34■■□□□ 1.01
TNFRSF1A-205ENST00000534885 TKTL1P51854 596 aa21.33■■□□□ 1.01
TNFRSF1A-205ENST00000534885 ELAVL2Q12926 359 aaKnown RBP21.33■■□□□ 1.01
TNFRSF1A-205ENST00000534885 C15orf59Q2T9L4 293 aaPredicted RBP21.33■■□□□ 1.01
TNFRSF1A-205ENST00000534885 SPOUT1Q5T280 376 aaKnown RBP21.33■■□□□ 1.01
TNFRSF1A-205ENST00000534885 ZNF365Q70YC5 407 aa21.33■■□□□ 1.01
TNFRSF1A-205ENST00000534885 SPATA2LQ8IUW3 424 aaPredicted RBP21.33■■□□□ 1.01
TNFRSF1A-205ENST00000534885 AP1M1Q9BXS5 423 aa21.33■■□□□ 1.01
TNFRSF1A-205ENST00000534885 TTC7AQ9ULT0 858 aaPredicted RBP21.33■■□□□ 1.01
TNFRSF1A-205ENST00000534885 SBDSQ9Y3A5 250 aaKnown RBP eCLIP21.33■■□□□ 1.01
TNFRSF1A-205ENST00000534885 ZBBXA8MT70 800 aa21.33■■□□□ 1
TNFRSF1A-205ENST00000534885 EPHB4P54760 987 aa21.33■■□□□ 1
TNFRSF1A-205ENST00000534885 BTG3Q14201 252 aaPredicted RBP21.33■■□□□ 1
TNFRSF1A-205ENST00000534885 LLGL1Q15334 1064 aa21.33■■□□□ 1
TNFRSF1A-205ENST00000534885 RAB6CQ53S08 254 aa21.33■■□□□ 1
TNFRSF1A-205ENST00000534885 ZNF280DQ6N043 979 aa21.33■■□□□ 1
TNFRSF1A-205ENST00000534885 KCNT2Q6UVM3 1135 aa21.33■■□□□ 1
TNFRSF1A-205ENST00000534885 SIX6OS1Q8N1H7 587 aa21.33■■□□□ 1
TNFRSF1A-205ENST00000534885 CNPY3Q9BT09 278 aa21.33■■□□□ 1
TNFRSF1A-205ENST00000534885 VN1R3Q9BXE9 311 aa21.33■■□□□ 1
TNFRSF1A-205ENST00000534885 RAB6CQ9H0N0 254 aa21.33■■□□□ 1
TNFRSF1A-205ENST00000534885 DMAP1Q9NPF5 467 aaPredicted RBP21.33■■□□□ 1
TNFRSF1A-205ENST00000534885 CYP2F1P24903 491 aa21.32■■□□□ 1
TNFRSF1A-205ENST00000534885 SCNN1AP37088 669 aa21.32■■□□□ 1
TNFRSF1A-205ENST00000534885 FPGSQ05932 587 aa21.32■■□□□ 1
TNFRSF1A-205ENST00000534885 PPIGQ13427 754 aaKnown RBP eCLIP21.32■■□□□ 16e-8■■■■□ 21.4
TNFRSF1A-205ENST00000534885 CDO1Q16878 200 aa21.32■■□□□ 1
TNFRSF1A-205ENST00000534885 CCDC14Q49A88 953 aa21.32■■□□□ 1
TNFRSF1A-205ENST00000534885 RAB41Q5JT25 222 aa21.32■■□□□ 1
TNFRSF1A-205ENST00000534885 SEL1L2Q5TEA6 688 aa21.32■■□□□ 1
TNFRSF1A-205ENST00000534885 RSPO2Q6UXX9 243 aaPredicted RBP21.32■■□□□ 1
TNFRSF1A-205ENST00000534885 C4orf50Q6ZRC1 276 aa21.32■■□□□ 1
TNFRSF1A-205ENST00000534885 MTERF4Q7Z6M4 381 aaKnown RBP21.32■■□□□ 1
TNFRSF1A-205ENST00000534885 ADAT2Q7Z6V5 191 aaKnown RBP21.32■■□□□ 1
TNFRSF1A-205ENST00000534885 IGSF21Q96ID5 467 aa21.32■■□□□ 1
TNFRSF1A-205ENST00000534885 ULBP1Q9BZM6 244 aa21.32■■□□□ 1
TNFRSF1A-205ENST00000534885 KLHL11Q9NVR0 708 aa21.32■■□□□ 1
TNFRSF1A-205ENST00000534885 ABI2Q9NYB9 513 aaPredicted RBP21.32■■□□□ 1
TNFRSF1A-205ENST00000534885 MRPL42Q9Y6G3 142 aaKnown RBP21.32■■□□□ 1
TNFRSF1A-205ENST00000534885 PATJQ8NI35 1801 aa21.32■■□□□ 1
TNFRSF1A-205ENST00000534885 EFEMP2O95967 443 aa21.32■■□□□ 1
TNFRSF1A-205ENST00000534885 RHOXF2BP0C7M4 288 aa21.32■■□□□ 1
TNFRSF1A-205ENST00000534885 IL1R2P27930 398 aa21.32■■□□□ 1
TNFRSF1A-205ENST00000534885 MRPS5P82675 430 aaKnown RBP21.32■■□□□ 1
TNFRSF1A-205ENST00000534885 ATP11AP98196 1134 aa21.32■■□□□ 1
TNFRSF1A-205ENST00000534885 SLC25A11Q02978 314 aaKnown RBP21.32■■□□□ 1
TNFRSF1A-205ENST00000534885 LONRF2Q1L5Z9 754 aa21.32■■□□□ 1
TNFRSF1A-205ENST00000534885 DCP1BQ8IZD4 617 aaKnown RBP21.32■■□□□ 1
TNFRSF1A-205ENST00000534885 ACSF2Q96CM8 615 aaPredicted RBP21.32■■□□□ 1
TNFRSF1A-205ENST00000534885 RHOXF2Q9BQY4 288 aa21.32■■□□□ 1
TNFRSF1A-205ENST00000534885 TTPALQ9BTX7 342 aa21.32■■□□□ 1
TNFRSF1A-205ENST00000534885 NR2E1Q9Y466 385 aa21.32■■□□□ 1
TNFRSF1A-205ENST00000534885 FGBP02675 491 aa21.31■■□□□ 1
TNFRSF1A-205ENST00000534885 SYN1P17600 705 aa21.31■■□□□ 1
TNFRSF1A-205ENST00000534885 PRSS55Q6UWB4 352 aaPredicted RBP21.31■■□□□ 1
TNFRSF1A-205ENST00000534885 KATNAL2Q8IYT4 538 aa21.31■■□□□ 1
TNFRSF1A-205ENST00000534885 FAM149B1Q96BN6 582 aa21.31■■□□□ 1
TNFRSF1A-205ENST00000534885 PGLYRP2Q96PD5 576 aa21.31■■□□□ 1
TNFRSF1A-205ENST00000534885 YME1L1Q96TA2 773 aa21.31■■□□□ 1
TNFRSF1A-205ENST00000534885 UBXN6Q9BZV1 441 aa21.31■■□□□ 1
TNFRSF1A-205ENST00000534885 ASNSD1Q9NWL6 643 aa21.31■■□□□ 1
TNFRSF1A-205ENST00000534885 KRIT1O00522 736 aa21.3■■□□□ 1
TNFRSF1A-205ENST00000534885 DPYSL4O14531 572 aa21.3■■□□□ 1
TNFRSF1A-205ENST00000534885 RNF8O76064 485 aa21.3■■□□□ 1
TNFRSF1A-205ENST00000534885 TFE3P19532 575 aaPredicted RBP21.3■■□□□ 1
TNFRSF1A-205ENST00000534885 ARPP19P56211 112 aa21.3■■□□□ 1
TNFRSF1A-205ENST00000534885 ACAP1Q15027 740 aa21.3■■□□□ 1
TNFRSF1A-205ENST00000534885 EFHC1Q5JVL4 640 aa21.3■■□□□ 1
TNFRSF1A-205ENST00000534885 LRRC38Q5VT99 294 aa21.3■■□□□ 1
TNFRSF1A-205ENST00000534885 CMTR2Q8IYT2 770 aaKnown RBP21.3■■□□□ 1
TNFRSF1A-205ENST00000534885 MMGT1Q8N4V1 131 aa21.3■■□□□ 1
TNFRSF1A-205ENST00000534885 ADAM33Q9BZ11 813 aa21.3■■□□□ 1
TNFRSF1A-205ENST00000534885 CXXC1Q9P0U4 656 aaPredicted RBP21.3■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms