RNA–Protein interactions for RNA: ENST00000534705.5

USP48-215, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 566 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-215ENST00000534705 L1RE1Q9UN81 338 aa4.31□□□□□ -1.72
USP48-215ENST00000534705 SHOC2Q9UQ13 582 aa4.31□□□□□ -1.72
USP48-215ENST00000534705 SPHKAPQ2M3C7 1700 aa4.31□□□□□ -1.72
USP48-215ENST00000534705 IQGAP3Q86VI3 1631 aa4.31□□□□□ -1.72
USP48-215ENST00000534705 CNTLNQ9NXG0 1405 aa4.3□□□□□ -1.72
USP48-215ENST00000534705 ADGRA2Q96PE1 1338 aa4.3□□□□□ -1.72
USP48-215ENST00000534705 A0A087WWL8 130 aa4.3□□□□□ -1.72
USP48-215ENST00000534705 CGB1A6NKQ9 187 aa4.3□□□□□ -1.72
USP48-215ENST00000534705 GCOM1H8Y6P7 765 aaPredicted RBP4.3□□□□□ -1.72
USP48-215ENST00000534705 MYO1FO00160 1098 aa4.3□□□□□ -1.72
USP48-215ENST00000534705 DCLK1O15075 740 aa4.3□□□□□ -1.72
USP48-215ENST00000534705 VPS4BO75351 444 aa4.3□□□□□ -1.72
USP48-215ENST00000534705 URI1O94763 535 aaPredicted RBP4.3□□□□□ -1.72
USP48-215ENST00000534705 NXPH3O95157 252 aa4.3□□□□□ -1.72
USP48-215ENST00000534705 WT1P19544 449 aaPredicted RBP4.3□□□□□ -1.72
USP48-215ENST00000534705 CHRM3P20309 590 aa4.3□□□□□ -1.72
USP48-215ENST00000534705 MAPK10P53779 464 aa4.3□□□□□ -1.72
USP48-215ENST00000534705 CACNB3P54284 484 aa4.3□□□□□ -1.72
USP48-215ENST00000534705 SATB1Q01826 763 aa4.3□□□□□ -1.72
USP48-215ENST00000534705 ICE2Q659A1 982 aa4.3□□□□□ -1.72
USP48-215ENST00000534705 KAZNQ674X7 775 aa4.3□□□□□ -1.72
USP48-215ENST00000534705 LMBRD2Q68DH5 695 aaPredicted RBP4.3□□□□□ -1.72
USP48-215ENST00000534705 LAYNQ6UX15 382 aa4.3□□□□□ -1.72
USP48-215ENST00000534705 CHST15Q7LFX5 561 aaPredicted RBP4.3□□□□□ -1.72
USP48-215ENST00000534705 PTF1AQ7RTS3 328 aa4.3□□□□□ -1.72
USP48-215ENST00000534705 PEG10Q86TG7 708 aaKnown RBP4.3□□□□□ -1.72
USP48-215ENST00000534705 GAS2L3Q86XJ1 694 aa4.3□□□□□ -1.72
USP48-215ENST00000534705 TOR1AIP2Q8NFQ8 470 aa4.3□□□□□ -1.72
USP48-215ENST00000534705 OR6B3Q8NGW1 331 aa4.3□□□□□ -1.72
USP48-215ENST00000534705 IL31RAQ8NI17 732 aa4.3□□□□□ -1.72
USP48-215ENST00000534705 ATRIPQ8WXE1 791 aa4.3□□□□□ -1.72
USP48-215ENST00000534705 WASF1Q92558 559 aa4.3□□□□□ -1.72
USP48-215ENST00000534705 FKBP10Q96AY3 582 aa4.3□□□□□ -1.72
USP48-215ENST00000534705 UROC1Q96N76 676 aa4.3□□□□□ -1.72
USP48-215ENST00000534705 TIMP4Q99727 224 aa4.3□□□□□ -1.72
USP48-215ENST00000534705 PTDSS2Q9BVG9 487 aa4.3□□□□□ -1.72
USP48-215ENST00000534705 ACTRT3Q9BYD9 372 aa4.3□□□□□ -1.72
USP48-215ENST00000534705 TPSD1Q9BZJ3 242 aa4.3□□□□□ -1.72
USP48-215ENST00000534705 PRDM11Q9NQV5 511 aa4.3□□□□□ -1.72
USP48-215ENST00000534705 EHD3Q9NZN3 535 aa4.3□□□□□ -1.72
USP48-215ENST00000534705 KLHL42Q9P2K6 505 aa4.3□□□□□ -1.72
USP48-215ENST00000534705 XPR1Q9UBH6 696 aa4.3□□□□□ -1.72
USP48-215ENST00000534705 STAP2Q9UGK3 403 aa4.3□□□□□ -1.72
USP48-215ENST00000534705 CPA4Q9UI42 421 aa4.3□□□□□ -1.72
USP48-215ENST00000534705 G3BP2Q9UN86 482 aaKnown RBP4.3□□□□□ -1.72
USP48-215ENST00000534705 SH2B3Q9UQQ2 575 aa4.3□□□□□ -1.72
USP48-215ENST00000534705 ENTPD2Q9Y5L3 495 aa4.3□□□□□ -1.72
USP48-215ENST00000534705 PIK3C2BO00750 1634 aa4.3□□□□□ -1.72
USP48-215ENST00000534705 SYNMO15061 1565 aa4.3□□□□□ -1.72
USP48-215ENST00000534705 NEURL4Q96JN8 1562 aa4.3□□□□□ -1.72
USP48-215ENST00000534705 LMTK2Q8IWU2 1503 aa4.3□□□□□ -1.72
USP48-215ENST00000534705 PZPP20742 1482 aa4.3□□□□□ -1.72
USP48-215ENST00000534705 NPATQ14207 1427 aa4.29□□□□□ -1.72
USP48-215ENST00000534705 NCOA1Q15788 1441 aa4.29□□□□□ -1.72
USP48-215ENST00000534705 ERBINQ96RT1 1412 aa4.29□□□□□ -1.72
USP48-215ENST00000534705 RRBP1Q9P2E9 1410 aaKnown RBP4.29□□□□□ -1.72
USP48-215ENST00000534705 WDR91A4D1P6 747 aa4.29□□□□□ -1.72
USP48-215ENST00000534705 ISM1B1AKI9 464 aa4.29□□□□□ -1.72
USP48-215ENST00000534705 ADM5C9JUS6 153 aa4.29□□□□□ -1.72
USP48-215ENST00000534705 MGST3O14880 152 aa4.29□□□□□ -1.72
USP48-215ENST00000534705 ZBED1O96006 694 aa4.29□□□□□ -1.72
USP48-215ENST00000534705 CBSLP0DN79 551 aa4.29□□□□□ -1.72
USP48-215ENST00000534705 LRPAP1P30533 357 aa4.29□□□□□ -1.72
USP48-215ENST00000534705 CBSP35520 551 aa4.29□□□□□ -1.72
USP48-215ENST00000534705 PXNP49023 591 aaPredicted RBP4.29□□□□□ -1.72
USP48-215ENST00000534705 SLC11A2P49281 568 aa4.29□□□□□ -1.72
USP48-215ENST00000534705 ZNF134P52741 427 aa4.29□□□□□ -1.72
USP48-215ENST00000534705 ARHGAP29Q52LW3 1261 aa4.29□□□□□ -1.72
USP48-215ENST00000534705 ZNF618Q5T7W0 954 aa4.29□□□□□ -1.72
USP48-215ENST00000534705 TMEM108Q6UXF1 575 aa4.29□□□□□ -1.72
USP48-215ENST00000534705 DTX2Q86UW9 622 aa4.29□□□□□ -1.72
USP48-215ENST00000534705 P2RX7Q99572 595 aaKnown RBP4.29□□□□□ -1.72
USP48-215ENST00000534705 C22orf23Q9BZE7 217 aa4.29□□□□□ -1.72
USP48-215ENST00000534705 TMX2Q9Y320 296 aa4.29□□□□□ -1.72
USP48-215ENST00000534705 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP4.29□□□□□ -1.72
USP48-215ENST00000534705 KIF1BO60333 1816 aa4.29□□□□□ -1.72
USP48-215ENST00000534705 EFCAB6Q5THR3 1501 aa4.29□□□□□ -1.72
USP48-215ENST00000534705 IQGAP1P46940 1657 aa4.29□□□□□ -1.72
USP48-215ENST00000534705 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP4.28□□□□□ -1.72
USP48-215ENST00000534705 TLR5O60602 858 aa4.28□□□□□ -1.72
USP48-215ENST00000534705 CHRM2P08172 466 aa4.28□□□□□ -1.72
USP48-215ENST00000534705 PCSK6P29122 969 aa4.28□□□□□ -1.72
USP48-215ENST00000534705 UCP3P55916 312 aa4.28□□□□□ -1.72
USP48-215ENST00000534705 FAM193AP78312 1265 aa4.28□□□□□ -1.72
USP48-215ENST00000534705 RAB32Q13637 225 aa4.28□□□□□ -1.72
USP48-215ENST00000534705 CNN3Q15417 329 aaKnown RBP4.28□□□□□ -1.72
USP48-215ENST00000534705 SLC44A4Q53GD3 710 aa4.28□□□□□ -1.72
USP48-215ENST00000534705 PLAC9Q5JTB6 97 aa4.28□□□□□ -1.72
USP48-215ENST00000534705 VPS53Q5VIR6 699 aa4.28□□□□□ -1.72
USP48-215ENST00000534705 SWSAP1Q6NVH7 229 aa4.28□□□□□ -1.72
USP48-215ENST00000534705 APOA5Q6Q788 366 aa4.28□□□□□ -1.72
USP48-215ENST00000534705 ZNF788Q6ZQV5 615 aa4.28□□□□□ -1.72
USP48-215ENST00000534705 PCSK9Q8NBP7 692 aaKnown RBP4.28□□□□□ -1.72
USP48-215ENST00000534705 SPATA3Q8NHX4 192 aa4.28□□□□□ -1.72
USP48-215ENST00000534705 TFAP2BQ92481 460 aa4.28□□□□□ -1.72
USP48-215ENST00000534705 RFKQ969G6 155 aa4.28□□□□□ -1.72
USP48-215ENST00000534705 SARAFQ96BY9 339 aa4.28□□□□□ -1.72
USP48-215ENST00000534705 NT5C1BQ96P26 610 aa4.28□□□□□ -1.72
USP48-215ENST00000534705 MESP1Q9BRJ9 268 aa4.28□□□□□ -1.72
USP48-215ENST00000534705 TTYH3Q9C0H2 523 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms