RNA–Protein interactions for RNA: ENST00000534389.2

CSDE1-216, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 601 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-216ENST00000534389 GDF3Q9NR23 364 aa3.43□□□□□ -1.86
CSDE1-216ENST00000534389 ABCF3Q9NUQ8 709 aa3.43□□□□□ -1.86
CSDE1-216ENST00000534389 SDAD1Q9NVU7 687 aaKnown RBP eCLIP3.43□□□□□ -1.86
CSDE1-216ENST00000534389 SPATA6Q9NWH7 488 aaPredicted RBP3.43□□□□□ -1.86
CSDE1-216ENST00000534389 EHD2Q9NZN4 543 aa3.43□□□□□ -1.86
CSDE1-216ENST00000534389 IP6K2Q9UHH9 426 aa3.43□□□□□ -1.86
CSDE1-216ENST00000534389 TMCO1Q9UM00 188 aa3.43□□□□□ -1.86
CSDE1-216ENST00000534389 GUCA1BQ9UMX6 200 aa3.43□□□□□ -1.86
CSDE1-216ENST00000534389 WASF3Q9UPY6 502 aa3.43□□□□□ -1.86
CSDE1-216ENST00000534389 NFE2L3Q9Y4A8 694 aa3.43□□□□□ -1.86
CSDE1-216ENST00000534389 EPN1Q9Y6I3 576 aaPredicted RBP3.43□□□□□ -1.86
CSDE1-216ENST00000534389 ZCCHC11Q5TAX3 1644 aaKnown RBP3.43□□□□□ -1.86
CSDE1-216ENST00000534389 ABCC1P33527 1531 aa3.43□□□□□ -1.86
CSDE1-216ENST00000534389 WDR17Q8IZU2 1322 aa3.43□□□□□ -1.86
CSDE1-216ENST00000534389 SETBP1Q9Y6X0 1596 aa3.42□□□□□ -1.86
CSDE1-216ENST00000534389 XRN1Q8IZH2 1706 aaKnown RBP3.42□□□□□ -1.86
CSDE1-216ENST00000534389 IFT172Q9UG01 1749 aa3.42□□□□□ -1.86
CSDE1-216ENST00000534389 RFX7Q2KHR2 1363 aa3.42□□□□□ -1.86
CSDE1-216ENST00000534389 CAMSAP1Q5T5Y3 1602 aa3.42□□□□□ -1.86
CSDE1-216ENST00000534389 E2F8A0AVK6 867 aa3.42□□□□□ -1.86
CSDE1-216ENST00000534389 LRRD1A4D1F6 860 aa3.42□□□□□ -1.86
CSDE1-216ENST00000534389 SH3D21A4FU49 640 aa3.42□□□□□ -1.86
CSDE1-216ENST00000534389 CFAP73A6NFT4 308 aa3.42□□□□□ -1.86
CSDE1-216ENST00000534389 C9orf118A6NHY6 69 aa3.42□□□□□ -1.86
CSDE1-216ENST00000534389 SIGLEC16A6NMB1 481 aa3.42□□□□□ -1.86
CSDE1-216ENST00000534389 DBX1A6NMT0 343 aa3.42□□□□□ -1.86
CSDE1-216ENST00000534389 F8VZ95 297 aa3.42□□□□□ -1.86
CSDE1-216ENST00000534389 GABRDO14764 452 aa3.42□□□□□ -1.86
CSDE1-216ENST00000534389 IFIT3O14879 490 aaKnown RBP3.42□□□□□ -1.86
CSDE1-216ENST00000534389 PEX11AO75192 247 aa3.42□□□□□ -1.86
CSDE1-216ENST00000534389 GNA14O95837 355 aa3.42□□□□□ -1.86
CSDE1-216ENST00000534389 OAS1P00973 400 aaKnown RBP3.42□□□□□ -1.86
CSDE1-216ENST00000534389 SHBGP04278 402 aa3.42□□□□□ -1.86
CSDE1-216ENST00000534389 PDHA1P08559 390 aa3.42□□□□□ -1.86
CSDE1-216ENST00000534389 PARP1P09874 1014 aaKnown RBP3.42□□□□□ -1.86
CSDE1-216ENST00000534389 FAM200BP0CF97 657 aa3.42□□□□□ -1.86
CSDE1-216ENST00000534389 ZKSCAN1P17029 563 aaPredicted RBP3.42□□□□□ -1.86
CSDE1-216ENST00000534389 GM2AP17900 193 aa3.42□□□□□ -1.86
CSDE1-216ENST00000534389 CYP11B2P19099 503 aa3.42□□□□□ -1.86
CSDE1-216ENST00000534389 PDIA3P30101 505 aaKnown RBP3.42□□□□□ -1.86
CSDE1-216ENST00000534389 HSPA9P38646 679 aaKnown RBP3.42□□□□□ -1.86
CSDE1-216ENST00000534389 ETV4P43268 484 aa3.42□□□□□ -1.86
CSDE1-216ENST00000534389 SYKP43405 635 aa3.42□□□□□ -1.86
CSDE1-216ENST00000534389 RECQLP46063 649 aaPredicted RBP3.42□□□□□ -1.86
CSDE1-216ENST00000534389 GPR15P49685 360 aa3.42□□□□□ -1.86
CSDE1-216ENST00000534389 PEX5P50542 639 aa3.42□□□□□ -1.86
CSDE1-216ENST00000534389 EPHB4P54760 987 aa3.42□□□□□ -1.86
CSDE1-216ENST00000534389 SLURP1P55000 103 aa3.42□□□□□ -1.86
CSDE1-216ENST00000534389 POLE2P56282 527 aa3.42□□□□□ -1.86
CSDE1-216ENST00000534389 PHEXP78562 749 aa3.42□□□□□ -1.86
CSDE1-216ENST00000534389 MRPS9P82933 396 aaKnown RBP3.42□□□□□ -1.86
CSDE1-216ENST00000534389 HTRA3P83110 453 aa3.42□□□□□ -1.86
CSDE1-216ENST00000534389 CKAP4Q07065 602 aaKnown RBP3.42□□□□□ -1.86
CSDE1-216ENST00000534389 ZNF844Q08AG5 666 aa3.42□□□□□ -1.86
CSDE1-216ENST00000534389 CBX3Q13185 183 aa3.42□□□□□ -1.86
CSDE1-216ENST00000534389 ADAM15Q13444 863 aa3.42□□□□□ -1.86
CSDE1-216ENST00000534389 CUL4BQ13620 913 aa3.42□□□□□ -1.86
CSDE1-216ENST00000534389 SLC39A14Q15043 492 aa3.42□□□□□ -1.86
CSDE1-216ENST00000534389 PCOLCEQ15113 449 aa3.42□□□□□ -1.86
CSDE1-216ENST00000534389 CNPY1Q3B7I2 92 aa3.42□□□□□ -1.86
CSDE1-216ENST00000534389 ZC2HC1CQ53FD0 456 aaPredicted RBP3.42□□□□□ -1.86
CSDE1-216ENST00000534389 HSP90AB4PQ58FF6 505 aa3.42□□□□□ -1.86
CSDE1-216ENST00000534389 FAM133BQ5BKY9 247 aaKnown RBP3.42□□□□□ -1.86
CSDE1-216ENST00000534389 PITRM1Q5JRX3 1037 aa3.42□□□□□ -1.86
CSDE1-216ENST00000534389 FAM26FQ5R3K3 315 aa3.42□□□□□ -1.86
CSDE1-216ENST00000534389 CFAP58Q5T655 872 aa3.42□□□□□ -1.86
CSDE1-216ENST00000534389 RESP18Q5W5W9 173 aa3.42□□□□□ -1.86
CSDE1-216ENST00000534389 ANO1Q5XXA6 986 aa3.42□□□□□ -1.86
CSDE1-216ENST00000534389 KANK2Q63ZY3 851 aa3.42□□□□□ -1.86
CSDE1-216ENST00000534389 PPP4R4Q6NUP7 873 aa3.42□□□□□ -1.86
CSDE1-216ENST00000534389 TMEM154Q6P9G4 183 aa3.42□□□□□ -1.86
CSDE1-216ENST00000534389 EMBQ6PCB8 327 aa3.42□□□□□ -1.86
CSDE1-216ENST00000534389 WDR59Q6PJI9 974 aa3.42□□□□□ -1.86
CSDE1-216ENST00000534389 CCDC129Q6ZRS4 1044 aa3.42□□□□□ -1.86
CSDE1-216ENST00000534389 MCM10Q7L590 875 aa3.42□□□□□ -1.86
CSDE1-216ENST00000534389 MAATS1Q7Z4T9 603 aa3.42□□□□□ -1.86
CSDE1-216ENST00000534389 TMTC1Q8IUR5 882 aa3.42□□□□□ -1.86
CSDE1-216ENST00000534389 APLFQ8IW19 511 aaPredicted RBP3.42□□□□□ -1.86
CSDE1-216ENST00000534389 FAM114A1Q8IWE2 563 aa3.42□□□□□ -1.86
CSDE1-216ENST00000534389 KBTBD2Q8IY47 623 aa3.42□□□□□ -1.86
CSDE1-216ENST00000534389 ZDHHC14Q8IZN3 488 aa3.42□□□□□ -1.86
CSDE1-216ENST00000534389 LGI4Q8N135 537 aa3.42□□□□□ -1.86
CSDE1-216ENST00000534389 SDR16C5Q8N3Y7 309 aa3.42□□□□□ -1.86
CSDE1-216ENST00000534389 AFAP1Q8N556 730 aa3.42□□□□□ -1.86
CSDE1-216ENST00000534389 TEX9Q8N6V9 391 aa3.42□□□□□ -1.86
CSDE1-216ENST00000534389 ZBTB8BQ8NAP8 495 aaPredicted RBP3.42□□□□□ -1.86
CSDE1-216ENST00000534389 SMYD1Q8NB12 490 aa3.42□□□□□ -1.86
CSDE1-216ENST00000534389 SPATA4Q8NEY3 305 aa3.42□□□□□ -1.86
CSDE1-216ENST00000534389 OR14K1Q8NGZ2 314 aa3.42□□□□□ -1.86
CSDE1-216ENST00000534389 CCHCR1Q8TD31 782 aa3.42□□□□□ -1.86
CSDE1-216ENST00000534389 KCNG4Q8TDN1 519 aa3.42□□□□□ -1.86
CSDE1-216ENST00000534389 RUFY2Q8WXA3 655 aa3.42□□□□□ -1.86
CSDE1-216ENST00000534389 FATE1Q969F0 183 aa3.42□□□□□ -1.86
CSDE1-216ENST00000534389 EDC3Q96F86 508 aaKnown RBP3.42□□□□□ -1.86
CSDE1-216ENST00000534389 NAF1Q96HR8 494 aaKnown RBP3.42□□□□□ -1.86
CSDE1-216ENST00000534389 SLC2A13Q96QE2 648 aa3.42□□□□□ -1.86
CSDE1-216ENST00000534389 XPO6Q96QU8 1125 aaKnown RBP3.42□□□□□ -1.86
CSDE1-216ENST00000534389 MAP3K14Q99558 947 aa3.42□□□□□ -1.86
CSDE1-216ENST00000534389 NDNQ99608 321 aa3.42□□□□□ -1.86
CSDE1-216ENST00000534389 NAA15Q9BXJ9 866 aaKnown RBP3.42□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms