RNA–Protein interactions for RNA: ENST00000534373.5

CAPN1-228, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 581 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-228ENST00000534373 EDRF1Q3B7T1 1238 aa14.23□□□□□ -0.13
CAPN1-228ENST00000534373 C1orf220Q5T0J3 134 aa14.23□□□□□ -0.13
CAPN1-228ENST00000534373 SNX30Q5VWJ9 437 aa14.23□□□□□ -0.13
CAPN1-228ENST00000534373 FSTL4Q6MZW2 842 aa14.23□□□□□ -0.13
CAPN1-228ENST00000534373 Q6ZS52 159 aa14.23□□□□□ -0.13
CAPN1-228ENST00000534373 CHFRQ96EP1 664 aa14.23□□□□□ -0.13
CAPN1-228ENST00000534373 SMARCD1Q96GM5 515 aa14.23□□□□□ -0.13
CAPN1-228ENST00000534373 FAXDC2Q96IV6 333 aa14.23□□□□□ -0.13
CAPN1-228ENST00000534373 P2RY13Q9BPV8 354 aa14.23□□□□□ -0.13
CAPN1-228ENST00000534373 GTPBP4Q9BZE4 634 aaKnown RBP14.23□□□□□ -0.13
CAPN1-228ENST00000534373 IMPG2Q9BZV3 1241 aa14.23□□□□□ -0.13
CAPN1-228ENST00000534373 DNAI2Q9GZS0 605 aa14.23□□□□□ -0.13
CAPN1-228ENST00000534373 GOLPH3LQ9H4A5 285 aa14.23□□□□□ -0.13
CAPN1-228ENST00000534373 CYP3A43Q9HB55 503 aa14.23□□□□□ -0.13
CAPN1-228ENST00000534373 DMAP1Q9NPF5 467 aaPredicted RBP14.23□□□□□ -0.13
CAPN1-228ENST00000534373 RAB23Q9ULC3 237 aa14.23□□□□□ -0.13
CAPN1-228ENST00000534373 ANAPC1Q9H1A4 1944 aa14.23□□□□□ -0.13
CAPN1-228ENST00000534373 FAM92AA1XBS5 289 aa14.22□□□□□ -0.13
CAPN1-228ENST00000534373 GOLGA6L4A6NEF3 574 aa14.22□□□□□ -0.13
CAPN1-228ENST00000534373 CLDN5O00501 218 aa14.22□□□□□ -0.13
CAPN1-228ENST00000534373 SLC9A3R1O14745 358 aaPredicted RBP14.22□□□□□ -0.13
CAPN1-228ENST00000534373 TNFRSF10BO14763 440 aa14.22□□□□□ -0.13
CAPN1-228ENST00000534373 CLSTN1O94985 981 aa14.22□□□□□ -0.13
CAPN1-228ENST00000534373 NFATC1O95644 943 aa14.22□□□□□ -0.13
CAPN1-228ENST00000534373 OAS1P00973 400 aaKnown RBP14.22□□□□□ -0.13
CAPN1-228ENST00000534373 GTF2H1P32780 548 aa14.22□□□□□ -0.13
CAPN1-228ENST00000534373 CACNA2D1P54289 1103 aa14.22□□□□□ -0.13
CAPN1-228ENST00000534373 ZCWPW2Q504Y3 356 aa14.22□□□□□ -0.13
CAPN1-228ENST00000534373 PAQR9Q6ZVX9 377 aa14.22□□□□□ -0.13
CAPN1-228ENST00000534373 ERMP1Q7Z2K6 904 aa14.22□□□□□ -0.13
CAPN1-228ENST00000534373 FAM35AQ86V20 835 aa14.22□□□□□ -0.13
CAPN1-228ENST00000534373 DDX42Q86XP3 938 aaKnown RBP eCLIP14.22□□□□□ -0.13
CAPN1-228ENST00000534373 FAM186BQ8IYM0 893 aa14.22□□□□□ -0.13
CAPN1-228ENST00000534373 FUKQ8N0W3 1084 aa14.22□□□□□ -0.13
CAPN1-228ENST00000534373 CAMKK1Q8N5S9 505 aa14.22□□□□□ -0.13
CAPN1-228ENST00000534373 CD101Q93033 1021 aa14.22□□□□□ -0.13
CAPN1-228ENST00000534373 KCNK16Q96T55 309 aa14.22□□□□□ -0.13
CAPN1-228ENST00000534373 MED10Q9BTT4 135 aa14.22□□□□□ -0.13
CAPN1-228ENST00000534373 RNF38Q9H0F5 515 aa14.22□□□□□ -0.13
CAPN1-228ENST00000534373 SDCBP2Q9H190 292 aa14.22□□□□□ -0.13
CAPN1-228ENST00000534373 CSNK1G1Q9HCP0 422 aa14.22□□□□□ -0.13
CAPN1-228ENST00000534373 TMEM30AQ9NV96 361 aa14.22□□□□□ -0.13
CAPN1-228ENST00000534373 RMND1Q9NWS8 449 aa14.22□□□□□ -0.13
CAPN1-228ENST00000534373 MAPK8IP1Q9UQF2 711 aa14.22□□□□□ -0.13
CAPN1-228ENST00000534373 WDR87Q6ZQQ6 2873 aa14.22□□□□□ -0.13
CAPN1-228ENST00000534373 LEFTY2O00292 366 aa14.21□□□□□ -0.13
CAPN1-228ENST00000534373 ABL1P00519 1130 aa14.21□□□□□ -0.13
CAPN1-228ENST00000534373 HLA-DRAP01903 254 aa14.21□□□□□ -0.13
CAPN1-228ENST00000534373 SDHBP21912 280 aa14.21□□□□□ -0.13
CAPN1-228ENST00000534373 PIK3CAP42336 1068 aa14.21□□□□□ -0.13
CAPN1-228ENST00000534373 ASPAP45381 313 aa14.21□□□□□ -0.13
CAPN1-228ENST00000534373 RAP1GAPP47736 663 aa14.21□□□□□ -0.13
CAPN1-228ENST00000534373 TUBP50607 506 aa14.21□□□□□ -0.13
CAPN1-228ENST00000534373 NDST1P52848 882 aa14.21□□□□□ -0.13
CAPN1-228ENST00000534373 ZXDBP98169 803 aa14.21□□□□□ -0.13
CAPN1-228ENST00000534373 INCA1Q0VD86 236 aa14.21□□□□□ -0.13
CAPN1-228ENST00000534373 COBLL1Q53SF7 1204 aa14.21□□□□□ -0.13
CAPN1-228ENST00000534373 LAIR1Q6GTX8 287 aa14.21□□□□□ -0.13
CAPN1-228ENST00000534373 ACOT1Q86TX2 421 aa14.21□□□□□ -0.13
CAPN1-228ENST00000534373 WDR5BQ86VZ2 330 aa14.21□□□□□ -0.13
CAPN1-228ENST00000534373 KIAA2013Q8IYS2 634 aa14.21□□□□□ -0.13
CAPN1-228ENST00000534373 ADGRG2Q8IZP9 1017 aa14.21□□□□□ -0.13
CAPN1-228ENST00000534373 FMR1NBQ8N0W7 255 aaPredicted RBP14.21□□□□□ -0.13
CAPN1-228ENST00000534373 DCLK2Q8N568 766 aa14.21□□□□□ -0.13
CAPN1-228ENST00000534373 CCDC150Q8NCX0 1101 aa14.21□□□□□ -0.13
CAPN1-228ENST00000534373 GSDMAQ96QA5 445 aa14.21□□□□□ -0.13
CAPN1-228ENST00000534373 DUSP9Q99956 384 aaKnown RBP14.21□□□□□ -0.13
CAPN1-228ENST00000534373 LINC00597Q9H2U6 94 aa14.21□□□□□ -0.13
CAPN1-228ENST00000534373 FBXO44Q9H4M3 255 aa14.21□□□□□ -0.13
CAPN1-228ENST00000534373 FAM124BQ9H5Z6 455 aaPredicted RBP14.21□□□□□ -0.13
CAPN1-228ENST00000534373 FBRSL1Q9HCM7 1045 aaKnown RBP14.21□□□□□ -0.13
CAPN1-228ENST00000534373 TMEM8AQ9HCN3 771 aa14.21□□□□□ -0.13
CAPN1-228ENST00000534373 GMEB2Q9UKD1 530 aa14.21□□□□□ -0.13
CAPN1-228ENST00000534373 WNT6Q9Y6F9 365 aa14.21□□□□□ -0.13
CAPN1-228ENST00000534373 SPTBN4Q9H254 2564 aa14.21□□□□□ -0.14
CAPN1-228ENST00000534373 FRYLO94915 3013 aa14.2□□□□□ -0.14
CAPN1-228ENST00000534373 CETN3O15182 167 aa14.2□□□□□ -0.14
CAPN1-228ENST00000534373 HRO43593 1189 aa14.2□□□□□ -0.14
CAPN1-228ENST00000534373 STX10O60499 249 aa14.2□□□□□ -0.14
CAPN1-228ENST00000534373 LRP3O75074 770 aa14.2□□□□□ -0.14
CAPN1-228ENST00000534373 AP1G2O75843 785 aa14.2□□□□□ -0.14
CAPN1-228ENST00000534373 EGFP01133 1207 aa14.2□□□□□ -0.14
CAPN1-228ENST00000534373 ZDHHC11BP0C7U3 371 aa14.2□□□□□ -0.14
CAPN1-228ENST00000534373 GCLMP48507 274 aa14.2□□□□□ -0.14
CAPN1-228ENST00000534373 FNTBP49356 437 aa14.2□□□□□ -0.14
CAPN1-228ENST00000534373 PPP3CAQ08209 521 aa14.2□□□□□ -0.14
CAPN1-228ENST00000534373 SIM2Q14190 667 aaPredicted RBP14.2□□□□□ -0.14
CAPN1-228ENST00000534373 HECTD3Q5T447 861 aa14.2□□□□□ -0.14
CAPN1-228ENST00000534373 KRT39Q6A163 491 aa14.2□□□□□ -0.14
CAPN1-228ENST00000534373 SCARA5Q6ZMJ2 495 aa14.2□□□□□ -0.14
CAPN1-228ENST00000534373 TTC39CQ8N584 583 aa14.2□□□□□ -0.14
CAPN1-228ENST00000534373 TTC16Q8NEE8 873 aa14.2□□□□□ -0.14
CAPN1-228ENST00000534373 FBXO32Q969P5 355 aa14.2□□□□□ -0.14
CAPN1-228ENST00000534373 TIGD1Q96MW7 591 aa14.2□□□□□ -0.14
CAPN1-228ENST00000534373 GDPD2Q9HCC8 539 aa14.2□□□□□ -0.14
CAPN1-228ENST00000534373 TBC1D14Q9P2M4 693 aa14.2□□□□□ -0.14
CAPN1-228ENST00000534373 HOOK1Q9UJC3 728 aaKnown RBP14.2□□□□□ -0.14
CAPN1-228ENST00000534373 SLC8A2Q9UPR5 921 aa14.2□□□□□ -0.14
CAPN1-228ENST00000534373 CPQQ9Y646 472 aa14.2□□□□□ -0.14
CAPN1-228ENST00000534373 GPR179Q6PRD1 2367 aa14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms