RNA–Protein interactions for RNA: ENST00000534307.1

SF3B2-215, Transcript of splicing factor 3b subunit 2, humanhuman

TSL 3

Gene SF3B2, Length 625 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B2-215ENST00000534307 APOBEC3GQ9HC16 384 aaKnown RBP14.95□□□□□ -0.02
SF3B2-215ENST00000534307 RMND1Q9NWS8 449 aa14.95□□□□□ -0.02
SF3B2-215ENST00000534307 EHD2Q9NZN4 543 aa14.95□□□□□ -0.02
SF3B2-215ENST00000534307 ARHGAP26Q9UNA1 814 aa14.95□□□□□ -0.02
SF3B2-215ENST00000534307 WDFY3Q8IZQ1 3526 aa14.95□□□□□ -0.02
SF3B2-215ENST00000534307 GOLGA6L4A6NEF3 574 aa14.94□□□□□ -0.02
SF3B2-215ENST00000534307 TNFRSF10BO14763 440 aa14.94□□□□□ -0.02
SF3B2-215ENST00000534307 OLFM2O95897 454 aa14.94□□□□□ -0.02
SF3B2-215ENST00000534307 CKMP06732 381 aa14.94□□□□□ -0.02
SF3B2-215ENST00000534307 PIK3CAP42336 1068 aa14.94□□□□□ -0.02
SF3B2-215ENST00000534307 CSTF1Q05048 431 aaKnown RBP14.94□□□□□ -0.02
SF3B2-215ENST00000534307 INCA1Q0VD86 236 aa14.94□□□□□ -0.02
SF3B2-215ENST00000534307 RUNX3Q13761 415 aa14.94□□□□□ -0.02
SF3B2-215ENST00000534307 CCINQ13939 588 aa14.94□□□□□ -0.02
SF3B2-215ENST00000534307 TRIM68Q6AZZ1 485 aa14.94□□□□□ -0.02
SF3B2-215ENST00000534307 ACOT1Q86TX2 421 aa14.94□□□□□ -0.02
SF3B2-215ENST00000534307 ELOA2Q8IYF1 753 aaPredicted RBP14.94□□□□□ -0.02
SF3B2-215ENST00000534307 ZBTB44Q8NCP5 570 aa14.94□□□□□ -0.02
SF3B2-215ENST00000534307 ERCC4Q92889 916 aaPredicted RBP14.94□□□□□ -0.02
SF3B2-215ENST00000534307 EEF2KMTQ96G04 330 aa14.94□□□□□ -0.02
SF3B2-215ENST00000534307 TNIP3Q96KP6 325 aa14.94□□□□□ -0.02
SF3B2-215ENST00000534307 KCNK16Q96T55 309 aa14.94□□□□□ -0.02
SF3B2-215ENST00000534307 EBF3Q9H4W6 596 aa14.94□□□□□ -0.02
SF3B2-215ENST00000534307 TMEM8AQ9HCN3 771 aa14.94□□□□□ -0.02
SF3B2-215ENST00000534307 TRPC7Q9HCX4 862 aa14.94□□□□□ -0.02
SF3B2-215ENST00000534307 IL37Q9NZH6 218 aa14.94□□□□□ -0.02
SF3B2-215ENST00000534307 PCDHA5Q9Y5H7 936 aa14.94□□□□□ -0.02
SF3B2-215ENST00000534307 SPEGQ15772 3267 aa14.94□□□□□ -0.02
SF3B2-215ENST00000534307 OAS1P00973 400 aaKnown RBP14.93□□□□□ -0.02
SF3B2-215ENST00000534307 KRT13P13646 458 aa14.93□□□□□ -0.02
SF3B2-215ENST00000534307 ARSAP15289 507 aa14.93□□□□□ -0.02
SF3B2-215ENST00000534307 HDCP19113 662 aa14.93□□□□□ -0.02
SF3B2-215ENST00000534307 GTF2H1P32780 548 aa14.93□□□□□ -0.02
SF3B2-215ENST00000534307 PPP3CCP48454 512 aa14.93□□□□□ -0.02
SF3B2-215ENST00000534307 NDST1P52848 882 aa14.93□□□□□ -0.02
SF3B2-215ENST00000534307 ATXN1P54253 815 aaKnown RBP14.93□□□□□ -0.02
SF3B2-215ENST00000534307 PMS1P54277 932 aaKnown RBP14.93□□□□□ -0.02
SF3B2-215ENST00000534307 TAF10Q12962 218 aa14.93□□□□□ -0.02
SF3B2-215ENST00000534307 ORC1Q13415 861 aa14.93□□□□□ -0.02
SF3B2-215ENST00000534307 MTF1Q14872 753 aa14.93□□□□□ -0.02
SF3B2-215ENST00000534307 PON2Q15165 354 aa14.93□□□□□ -0.02
SF3B2-215ENST00000534307 PDGFRLQ15198 375 aa14.93□□□□□ -0.02
SF3B2-215ENST00000534307 UNC93AQ86WB7 457 aa14.93□□□□□ -0.02
SF3B2-215ENST00000534307 ZMIZ2Q8NF64 920 aa14.93□□□□□ -0.02
SF3B2-215ENST00000534307 OSCP1Q8WVF1 389 aa14.93□□□□□ -0.02
SF3B2-215ENST00000534307 SMARCD1Q96GM5 515 aa14.93□□□□□ -0.02
SF3B2-215ENST00000534307 TWNKQ96RR1 684 aa14.93□□□□□ -0.02
SF3B2-215ENST00000534307 CSNK1G1Q9HCP0 422 aa14.93□□□□□ -0.02
SF3B2-215ENST00000534307 RBM12Q9NTZ6 932 aaKnown RBP14.93□□□□□ -0.02
SF3B2-215ENST00000534307 TRPM5Q9NZQ8 1165 aa14.93□□□□□ -0.02
SF3B2-215ENST00000534307 PCDHGA2Q9Y5H1 932 aa14.93□□□□□ -0.02
SF3B2-215ENST00000534307 FAM92AA1XBS5 289 aa14.92□□□□□ -0.02
SF3B2-215ENST00000534307 KINO60870 393 aaKnown RBP14.92□□□□□ -0.02
SF3B2-215ENST00000534307 LILRB5O75023 590 aa14.92□□□□□ -0.02
SF3B2-215ENST00000534307 PDE6CP51160 858 aa14.92□□□□□ -0.02
SF3B2-215ENST00000534307 SLC7A9P82251 487 aa14.92□□□□□ -0.02
SF3B2-215ENST00000534307 LRRC32Q14392 662 aa14.92□□□□□ -0.02
SF3B2-215ENST00000534307 ST3GAL2Q16842 350 aa14.92□□□□□ -0.02
SF3B2-215ENST00000534307 TMEM196Q5HYL7 178 aa14.92□□□□□ -0.02
SF3B2-215ENST00000534307 DGKKQ5KSL6 1271 aa14.92□□□□□ -0.02
SF3B2-215ENST00000534307 TSSK4Q6SA08 328 aa14.92□□□□□ -0.02
SF3B2-215ENST00000534307 Q6ZS52 159 aa14.92□□□□□ -0.02
SF3B2-215ENST00000534307 NUP93Q8N1F7 819 aa14.92□□□□□ -0.02
SF3B2-215ENST00000534307 SPEM1Q8N4L4 309 aa14.92□□□□□ -0.02
SF3B2-215ENST00000534307 SH3RF2Q8TEC5 729 aa14.92□□□□□ -0.02
SF3B2-215ENST00000534307 WHAMMQ8TF30 809 aa14.92□□□□□ -0.02
SF3B2-215ENST00000534307 SEMA4DQ92854 862 aa14.92□□□□□ -0.02
SF3B2-215ENST00000534307 SMOQ99835 787 aa14.92□□□□□ -0.02
SF3B2-215ENST00000534307 NIF3L1Q9GZT8 377 aa14.92□□□□□ -0.02
SF3B2-215ENST00000534307 RNF38Q9H0F5 515 aa14.92□□□□□ -0.02
SF3B2-215ENST00000534307 CYP3A43Q9HB55 503 aa14.92□□□□□ -0.02
SF3B2-215ENST00000534307 DMAP1Q9NPF5 467 aaPredicted RBP14.92□□□□□ -0.02
SF3B2-215ENST00000534307 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.92□□□□□ -0.02
SF3B2-215ENST00000534307 KRT82Q9NSB4 513 aa14.92□□□□□ -0.02
SF3B2-215ENST00000534307 ZSCAN32Q9NX65 697 aa14.92□□□□□ -0.02
SF3B2-215ENST00000534307 ZFYVE26Q68DK2 2539 aa14.92□□□□□ -0.02
SF3B2-215ENST00000534307 ATP8B3O60423 1300 aa14.92□□□□□ -0.02
SF3B2-215ENST00000534307 LAMA1P25391 3075 aa14.91□□□□□ -0.02
SF3B2-215ENST00000534307 ANKRD11Q6UB99 2663 aaPredicted RBP14.91□□□□□ -0.02
SF3B2-215ENST00000534307 TRDMT1O14717 391 aaKnown RBP14.91□□□□□ -0.02
SF3B2-215ENST00000534307 CETN3O15182 167 aa14.91□□□□□ -0.02
SF3B2-215ENST00000534307 SLC16A3O15427 465 aaKnown RBP14.91□□□□□ -0.02
SF3B2-215ENST00000534307 BEST1O76090 585 aa14.91□□□□□ -0.02
SF3B2-215ENST00000534307 CLSTN1O94985 981 aa14.91□□□□□ -0.02
SF3B2-215ENST00000534307 RTN3O95197 1032 aaPredicted RBP14.91□□□□□ -0.02
SF3B2-215ENST00000534307 PAPSS2O95340 614 aaPredicted RBP14.91□□□□□ -0.02
SF3B2-215ENST00000534307 SMC2O95347 1197 aa14.91□□□□□ -0.02
SF3B2-215ENST00000534307 CCDC130P13994 396 aa14.91□□□□□ -0.02
SF3B2-215ENST00000534307 YWHAQP27348 245 aa14.91□□□□□ -0.02
SF3B2-215ENST00000534307 CCR3P51677 355 aa14.91□□□□□ -0.02
SF3B2-215ENST00000534307 SLC5A3P53794 718 aa14.91□□□□□ -0.02
SF3B2-215ENST00000534307 EML3Q32P44 896 aa14.91□□□□□ -0.02
SF3B2-215ENST00000534307 SNX30Q5VWJ9 437 aa14.91□□□□□ -0.02
SF3B2-215ENST00000534307 KRT39Q6A163 491 aa14.91□□□□□ -0.02
SF3B2-215ENST00000534307 ANKRD40Q6AI12 368 aa14.91□□□□□ -0.02
SF3B2-215ENST00000534307 CC2D1AQ6P1N0 951 aaPredicted RBP14.91□□□□□ -0.02
SF3B2-215ENST00000534307 SYNPOQ8N3V7 929 aa14.91□□□□□ -0.02
SF3B2-215ENST00000534307 KIAA1958Q8N8K9 716 aa14.91□□□□□ -0.02
SF3B2-215ENST00000534307 C12orf29Q8N999 325 aa14.91□□□□□ -0.02
SF3B2-215ENST00000534307 SCAMP5Q8TAC9 235 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms