RNA–Protein interactions for RNA: ENST00000534082.1

CD44-237, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 564 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-237ENST00000534082 EMC10Q5UCC4 262 aa6.99□□□□□ -1.29
CD44-237ENST00000534082 CREB3L3Q68CJ9 461 aa6.99□□□□□ -1.29
CD44-237ENST00000534082 OVOS1Q6IE37 1185 aa6.99□□□□□ -1.29
CD44-237ENST00000534082 ARMCX5Q6P1M9 558 aa6.99□□□□□ -1.29
CD44-237ENST00000534082 DBX2Q6ZNG2 339 aa6.99□□□□□ -1.29
CD44-237ENST00000534082 TMEM130Q8N3G9 435 aa6.99□□□□□ -1.29
CD44-237ENST00000534082 STKLD1Q8NE28 680 aa6.99□□□□□ -1.29
CD44-237ENST00000534082 OR10T2Q8NGX3 314 aa6.99□□□□□ -1.29
CD44-237ENST00000534082 SPATA18Q8TC71 538 aa6.99□□□□□ -1.29
CD44-237ENST00000534082 SH3RF2Q8TEC5 729 aa6.99□□□□□ -1.29
CD44-237ENST00000534082 PIGOQ8TEQ8 1089 aa6.99□□□□□ -1.29
CD44-237ENST00000534082 TTC9Q92623 222 aa6.99□□□□□ -1.29
CD44-237ENST00000534082 HAS1Q92839 578 aa6.99□□□□□ -1.29
CD44-237ENST00000534082 FGF11Q92914 225 aa6.99□□□□□ -1.29
CD44-237ENST00000534082 MED8Q96G25 268 aa6.99□□□□□ -1.29
CD44-237ENST00000534082 ZNF419Q96HQ0 510 aaPredicted RBP6.99□□□□□ -1.29
CD44-237ENST00000534082 LGMNQ99538 433 aa6.99□□□□□ -1.29
CD44-237ENST00000534082 EIF2AK1Q9BQI3 630 aaKnown RBP6.99□□□□□ -1.29
CD44-237ENST00000534082 SLC26A6Q9BXS9 759 aa6.99□□□□□ -1.29
CD44-237ENST00000534082 LINC00597Q9H2U6 94 aa6.99□□□□□ -1.29
CD44-237ENST00000534082 TMEM206Q9H813 350 aa6.99□□□□□ -1.29
CD44-237ENST00000534082 CPNE5Q9HCH3 593 aa6.99□□□□□ -1.29
CD44-237ENST00000534082 TRPC7Q9HCX4 862 aa6.99□□□□□ -1.29
CD44-237ENST00000534082 OBSL1O75147 1896 aa6.98□□□□□ -1.29
CD44-237ENST00000534082 ANK1P16157 1881 aa6.98□□□□□ -1.29
CD44-237ENST00000534082 TRAV19A0A0A6YYK7 116 aa6.98□□□□□ -1.29
CD44-237ENST00000534082 MYMKA6NI61 221 aa6.98□□□□□ -1.29
CD44-237ENST00000534082 MEI4A8MW99 385 aa6.98□□□□□ -1.29
CD44-237ENST00000534082 M0R2N6 131 aa6.98□□□□□ -1.29
CD44-237ENST00000534082 BRINP1O60477 761 aa6.98□□□□□ -1.29
CD44-237ENST00000534082 NDUFS2O75306 463 aa6.98□□□□□ -1.29
CD44-237ENST00000534082 APODP05090 189 aa6.98□□□□□ -1.29
CD44-237ENST00000534082 CYP17A1P05093 508 aa6.98□□□□□ -1.29
CD44-237ENST00000534082 USP17L7P0C7H9 530 aa6.98□□□□□ -1.29
CD44-237ENST00000534082 HOXB2P14652 356 aa6.98□□□□□ -1.29
CD44-237ENST00000534082 JUPP14923 745 aa6.98□□□□□ -1.29
CD44-237ENST00000534082 GCFC2P16383 781 aaKnown RBP6.98□□□□□ -1.29
CD44-237ENST00000534082 GRK6P43250 576 aa6.98□□□□□ -1.29
CD44-237ENST00000534082 SLC6A11P48066 632 aa6.98□□□□□ -1.29
CD44-237ENST00000534082 AARSP49588 968 aaKnown RBP eCLIP6.98□□□□□ -1.29
CD44-237ENST00000534082 BNC1Q01954 994 aa6.98□□□□□ -1.29
CD44-237ENST00000534082 KDSRQ06136 332 aa6.98□□□□□ -1.29
CD44-237ENST00000534082 HLA-BQ31612 363 aa6.98□□□□□ -1.29
CD44-237ENST00000534082 ARHGAP40Q5TG30 622 aa6.98□□□□□ -1.29
CD44-237ENST00000534082 MRPL14Q6P1L8 145 aaKnown RBP6.98□□□□□ -1.29
CD44-237ENST00000534082 IL27RAQ6UWB1 636 aa6.98□□□□□ -1.29
CD44-237ENST00000534082 DSTYKQ6XUX3 929 aa6.98□□□□□ -1.29
CD44-237ENST00000534082 ZNF574Q6ZN55 896 aaPredicted RBP6.98□□□□□ -1.29
CD44-237ENST00000534082 ERICH1Q86X53 443 aa6.98□□□□□ -1.29
CD44-237ENST00000534082 BLIDQ8IZY5 108 aa6.98□□□□□ -1.29
CD44-237ENST00000534082 ENGASEQ8NFI3 743 aa6.98□□□□□ -1.29
CD44-237ENST00000534082 LRRN4Q8WUT4 740 aa6.98□□□□□ -1.29
CD44-237ENST00000534082 NACC1Q96RE7 527 aa6.98□□□□□ -1.29
CD44-237ENST00000534082 SLC22A12Q96S37 553 aa6.98□□□□□ -1.29
CD44-237ENST00000534082 PNKPQ96T60 521 aa6.98□□□□□ -1.29
CD44-237ENST00000534082 RNF26Q9BY78 433 aaPredicted RBP6.98□□□□□ -1.29
CD44-237ENST00000534082 NRSN2Q9GZP1 204 aa6.98□□□□□ -1.29
CD44-237ENST00000534082 MIR1-1HGQ9H1L0 117 aa6.98□□□□□ -1.29
CD44-237ENST00000534082 ZFAND3Q9H8U3 227 aa6.98□□□□□ -1.29
CD44-237ENST00000534082 CD93Q9NPY3 652 aa6.98□□□□□ -1.29
CD44-237ENST00000534082 SH3GLB2Q9NR46 395 aa6.98□□□□□ -1.29
CD44-237ENST00000534082 ARHGEF4Q9NR80 690 aa6.98□□□□□ -1.29
CD44-237ENST00000534082 GMIPQ9P107 970 aa6.98□□□□□ -1.29
CD44-237ENST00000534082 MAGED2Q9UNF1 606 aaPredicted RBP6.98□□□□□ -1.29
CD44-237ENST00000534082 TNFSF13BQ9Y275 285 aa6.98□□□□□ -1.29
CD44-237ENST00000534082 HEMK1Q9Y5R4 338 aaPredicted RBP6.98□□□□□ -1.29
CD44-237ENST00000534082 ZNF638Q14966 1978 aaKnown RBP6.97□□□□□ -1.29
CD44-237ENST00000534082 A0A087WWV3 80 aa6.97□□□□□ -1.29
CD44-237ENST00000534082 A0A1W2PQF6 199 aa6.97□□□□□ -1.29
CD44-237ENST00000534082 ENO4A6NNW6 628 aa6.97□□□□□ -1.29
CD44-237ENST00000534082 CCNT1O60563 726 aaKnown RBP6.97□□□□□ -1.29
CD44-237ENST00000534082 AP1G2O75843 785 aa6.97□□□□□ -1.29
CD44-237ENST00000534082 HAPLN1P10915 354 aaPredicted RBP6.97□□□□□ -1.29
CD44-237ENST00000534082 ODC1P11926 461 aa6.97□□□□□ -1.29
CD44-237ENST00000534082 HARSP12081 509 aaKnown RBP6.97□□□□□ -1.29
CD44-237ENST00000534082 TYMPP19971 482 aa6.97□□□□□ -1.29
CD44-237ENST00000534082 ATP2B1P20020 1258 aa6.97□□□□□ -1.29
CD44-237ENST00000534082 LRPAP1P30533 357 aa6.97□□□□□ -1.29
CD44-237ENST00000534082 ACTN2P35609 894 aa6.97□□□□□ -1.29
CD44-237ENST00000534082 EIF2DP41214 584 aaKnown RBP6.97□□□□□ -1.29
CD44-237ENST00000534082 EFNA5P52803 228 aa6.97□□□□□ -1.29
CD44-237ENST00000534082 UCNP55089 124 aa6.97□□□□□ -1.29
CD44-237ENST00000534082 EXOSC10Q01780 885 aaKnown RBP6.97□□□□□ -1.29
CD44-237ENST00000534082 RESTQ13127 1097 aa6.97□□□□□ -1.29
CD44-237ENST00000534082 TARDBPQ13148 414 aaKnown RBP eCLIP6.97□□□□□ -1.29
CD44-237ENST00000534082 SUZ12Q15022 739 aaKnown RBP6.97□□□□□ -1.29
CD44-237ENST00000534082 PPP2R5AQ15172 486 aa6.97□□□□□ -1.29
CD44-237ENST00000534082 TBC1D25Q3MII6 688 aa6.97□□□□□ -1.29
CD44-237ENST00000534082 ZC2HC1CQ53FD0 456 aaPredicted RBP6.97□□□□□ -1.29
CD44-237ENST00000534082 BROXQ5VW32 411 aa6.97□□□□□ -1.29
CD44-237ENST00000534082 DHX32Q7L7V1 743 aaKnown RBP6.97□□□□□ -1.29
CD44-237ENST00000534082 VASH1Q7L8A9 365 aaPredicted RBP6.97□□□□□ -1.29
CD44-237ENST00000534082 TRMT11Q7Z4G4 463 aaKnown RBP6.97□□□□□ -1.29
CD44-237ENST00000534082 C12orf40Q86WS4 652 aa6.97□□□□□ -1.29
CD44-237ENST00000534082 ZNF513Q8N8E2 541 aaPredicted RBP6.97□□□□□ -1.29
CD44-237ENST00000534082 SPPL2BQ8TCT7 592 aa6.97□□□□□ -1.29
CD44-237ENST00000534082 DNASE2BQ8WZ79 361 aa6.97□□□□□ -1.29
CD44-237ENST00000534082 NAF1Q96HR8 494 aaKnown RBP6.97□□□□□ -1.29
CD44-237ENST00000534082 CDK15Q96Q40 435 aa6.97□□□□□ -1.29
CD44-237ENST00000534082 CYP2S1Q96SQ9 504 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms