RNA–Protein interactions for RNA: ENST00000533953.5

CMTM1-219, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CMTM1, Length 934 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-219ENST00000533953 USP8P40818 1118 aa14.16□□□□□ -0.14
CMTM1-219ENST00000533953 YWHAEP62258 255 aaKnown RBP14.16□□□□□ -0.14
CMTM1-219ENST00000533953 GCNT1Q02742 428 aa14.16□□□□□ -0.14
CMTM1-219ENST00000533953 PDE4CQ08493 712 aa14.16□□□□□ -0.14
CMTM1-219ENST00000533953 SGO2Q562F6 1265 aa14.16□□□□□ -0.14
CMTM1-219ENST00000533953 DHX40Q8IX18 779 aaKnown RBP14.16□□□□□ -0.14
CMTM1-219ENST00000533953 SIX5Q8N196 739 aa14.16□□□□□ -0.14
CMTM1-219ENST00000533953 TTC39CQ8N584 583 aa14.16□□□□□ -0.14
CMTM1-219ENST00000533953 NDRG1Q92597 394 aaKnown RBP14.16□□□□□ -0.14
CMTM1-219ENST00000533953 FBXO32Q969P5 355 aa14.16□□□□□ -0.14
CMTM1-219ENST00000533953 PBXIP1Q96AQ6 731 aa14.16□□□□□ -0.14
CMTM1-219ENST00000533953 C1QTNF1Q9BXJ1 281 aa14.16□□□□□ -0.14
CMTM1-219ENST00000533953 TRPV4Q9HBA0 871 aa14.16□□□□□ -0.14
CMTM1-219ENST00000533953 TRPM5Q9NZQ8 1165 aa14.16□□□□□ -0.14
CMTM1-219ENST00000533953 UXTQ9UBK9 157 aaPredicted RBP14.16□□□□□ -0.14
CMTM1-219ENST00000533953 RAPGEFL1Q9UHV5 662 aa14.16□□□□□ -0.14
CMTM1-219ENST00000533953 DNAJC12Q9UKB3 198 aa14.16□□□□□ -0.14
CMTM1-219ENST00000533953 TSPAN16Q9UKR8 245 aa14.16□□□□□ -0.14
CMTM1-219ENST00000533953 BECN2A8MW95 431 aa14.15□□□□□ -0.14
CMTM1-219ENST00000533953 O00370 1275 aa14.15□□□□□ -0.14
CMTM1-219ENST00000533953 PIK3R2O00459 728 aa14.15□□□□□ -0.14
CMTM1-219ENST00000533953 DPYSL4O14531 572 aa14.15□□□□□ -0.14
CMTM1-219ENST00000533953 SCAMP3O14828 347 aaKnown RBP14.15□□□□□ -0.14
CMTM1-219ENST00000533953 VDRP11473 427 aa14.15□□□□□ -0.14
CMTM1-219ENST00000533953 NPR3P17342 541 aa14.15□□□□□ -0.14
CMTM1-219ENST00000533953 HDCP19113 662 aa14.15□□□□□ -0.14
CMTM1-219ENST00000533953 CD72P21854 359 aa14.15□□□□□ -0.14
CMTM1-219ENST00000533953 AVPR1AP37288 418 aa14.15□□□□□ -0.14
CMTM1-219ENST00000533953 COPB1P53618 953 aaKnown RBP14.15□□□□□ -0.14
CMTM1-219ENST00000533953 ZXDBP98169 803 aa14.15□□□□□ -0.14
CMTM1-219ENST00000533953 PIGZQ86VD9 579 aa14.15□□□□□ -0.14
CMTM1-219ENST00000533953 ANKRD52Q8NB46 1076 aa14.15□□□□□ -0.14
CMTM1-219ENST00000533953 TRMT61BQ9BVS5 477 aaKnown RBP14.15□□□□□ -0.14
CMTM1-219ENST00000533953 LSM14BQ9BX40 385 aaKnown RBP14.15□□□□□ -0.14
CMTM1-219ENST00000533953 SMPD4Q9NXE4 827 aa14.15□□□□□ -0.14
CMTM1-219ENST00000533953 IL37Q9NZH6 218 aa14.15□□□□□ -0.14
CMTM1-219ENST00000533953 APEX2Q9UBZ4 518 aa14.15□□□□□ -0.14
CMTM1-219ENST00000533953 NUDT5Q9UKK9 219 aa14.15□□□□□ -0.14
CMTM1-219ENST00000533953 FAM170AA1A519 330 aa14.14□□□□□ -0.15
CMTM1-219ENST00000533953 GTPBP10A4D1E9 387 aaKnown RBP14.14□□□□□ -0.15
CMTM1-219ENST00000533953 CYP26A1O43174 497 aa14.14□□□□□ -0.15
CMTM1-219ENST00000533953 GABBR2O75899 941 aa14.14□□□□□ -0.15
CMTM1-219ENST00000533953 RTN3O95197 1032 aaPredicted RBP14.14□□□□□ -0.15
CMTM1-219ENST00000533953 TBX18O95935 607 aa14.14□□□□□ -0.15
CMTM1-219ENST00000533953 PAEPP09466 180 aa14.14□□□□□ -0.15
CMTM1-219ENST00000533953 ZNF18P17022 549 aa14.14□□□□□ -0.15
CMTM1-219ENST00000533953 PSMC3P17980 439 aa14.14□□□□□ -0.15
CMTM1-219ENST00000533953 TRIM21P19474 475 aaKnown RBP14.14□□□□□ -0.15
CMTM1-219ENST00000533953 CDK11BP21127 795 aaKnown RBP14.14□□□□□ -0.15
CMTM1-219ENST00000533953 RGS7P49802 495 aa14.14□□□□□ -0.15
CMTM1-219ENST00000533953 ZNF165P49910 485 aa14.14□□□□□ -0.15
CMTM1-219ENST00000533953 ZNF132P52740 706 aa14.14□□□□□ -0.15
CMTM1-219ENST00000533953 MFAP3P55082 362 aa14.14□□□□□ -0.15
CMTM1-219ENST00000533953 ZSCAN23Q3MJ62 389 aa14.14□□□□□ -0.15
CMTM1-219ENST00000533953 APTXQ7Z2E3 356 aaKnown RBP14.14□□□□□ -0.15
CMTM1-219ENST00000533953 MFSD6LQ8IWD5 586 aa14.14□□□□□ -0.15
CMTM1-219ENST00000533953 FLCNQ8NFG4 579 aa14.14□□□□□ -0.15
CMTM1-219ENST00000533953 CEP295NLQ96MC4 621 aa14.14□□□□□ -0.15
CMTM1-219ENST00000533953 SLITRK1Q96PX8 696 aa14.14□□□□□ -0.15
CMTM1-219ENST00000533953 CCSER2Q9H7U1 834 aa14.14□□□□□ -0.15
CMTM1-219ENST00000533953 BRD9Q9H8M2 597 aa14.14□□□□□ -0.15
CMTM1-219ENST00000533953 NMUR1Q9HB89 426 aa14.14□□□□□ -0.15
CMTM1-219ENST00000533953 SLC2A4RGQ9NR83 387 aa14.14□□□□□ -0.15
CMTM1-219ENST00000533953 HEBP1Q9NRV9 189 aa14.14□□□□□ -0.15
CMTM1-219ENST00000533953 TDP1Q9NUW8 608 aa14.14□□□□□ -0.15
CMTM1-219ENST00000533953 OSER1Q9NX31 292 aa14.14□□□□□ -0.15
CMTM1-219ENST00000533953 LIMA1Q9UHB6 759 aaKnown RBP14.14□□□□□ -0.15
CMTM1-219ENST00000533953 FHOD1Q9Y613 1164 aa14.14□□□□□ -0.15
CMTM1-219ENST00000533953 COL4A3Q01955 1670 aa14.14□□□□□ -0.15
CMTM1-219ENST00000533953 TRAV19A0A0A6YYK7 116 aa14.13□□□□□ -0.15
CMTM1-219ENST00000533953 FOXN3O00409 490 aaPredicted RBP14.13□□□□□ -0.15
CMTM1-219ENST00000533953 STK25O00506 426 aa14.13□□□□□ -0.15
CMTM1-219ENST00000533953 ZNF263O14978 683 aa14.13□□□□□ -0.15
CMTM1-219ENST00000533953 PI15O43692 258 aa14.13□□□□□ -0.15
CMTM1-219ENST00000533953 LETM1O95202 739 aaPredicted RBP14.13□□□□□ -0.15
CMTM1-219ENST00000533953 CKMP06732 381 aa14.13□□□□□ -0.15
CMTM1-219ENST00000533953 USP17L7P0C7H9 530 aa14.13□□□□□ -0.15
CMTM1-219ENST00000533953 KIF11P52732 1056 aa14.13□□□□□ -0.15
CMTM1-219ENST00000533953 TNK2Q07912 1038 aa14.13□□□□□ -0.15
CMTM1-219ENST00000533953 IQCB1Q15051 598 aa14.13□□□□□ -0.15
CMTM1-219ENST00000533953 NFKBIBQ15653 356 aa14.13□□□□□ -0.15
CMTM1-219ENST00000533953 SLC44A4Q53GD3 710 aa14.13□□□□□ -0.15
CMTM1-219ENST00000533953 KLHDC7AQ5VTJ3 777 aa14.13□□□□□ -0.15
CMTM1-219ENST00000533953 TRIM68Q6AZZ1 485 aa14.13□□□□□ -0.15
CMTM1-219ENST00000533953 DENND1BQ6P3S1 775 aa14.13□□□□□ -0.15
CMTM1-219ENST00000533953 SCD5Q86SK9 330 aa14.13□□□□□ -0.15
CMTM1-219ENST00000533953 YAF2Q8IY57 180 aa14.13□□□□□ -0.15
CMTM1-219ENST00000533953 CELF5Q8N6W0 485 aaKnown RBP14.13□□□□□ -0.15
CMTM1-219ENST00000533953 BPIFB1Q8TDL5 484 aa14.13□□□□□ -0.15
CMTM1-219ENST00000533953 SECISBP2LQ93073 1101 aaKnown RBP14.13□□□□□ -0.15
CMTM1-219ENST00000533953 WBP2Q969T9 261 aa14.13□□□□□ -0.15
CMTM1-219ENST00000533953 DNAI2Q9GZS0 605 aa14.13□□□□□ -0.15
CMTM1-219ENST00000533953 CBX8Q9HC52 389 aa14.13□□□□□ -0.15
CMTM1-219ENST00000533953 GKN1Q9NS71 199 aa14.13□□□□□ -0.15
CMTM1-219ENST00000533953 WNT16Q9UBV4 365 aa14.13□□□□□ -0.15
CMTM1-219ENST00000533953 CNTN6Q9UQ52 1028 aa14.13□□□□□ -0.15
CMTM1-219ENST00000533953 TRIOO75962 3097 aa14.12□□□□□ -0.15
CMTM1-219ENST00000533953 A0A1W2PQH9 124 aa14.12□□□□□ -0.15
CMTM1-219ENST00000533953 FAM92AA1XBS5 289 aa14.12□□□□□ -0.15
CMTM1-219ENST00000533953 PRR33A8MZF0 331 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms