RNA–Protein interactions for RNA: ENST00000533774.5

SVIP-205, Transcript of small VCP interacting protein, humanhuman

TSL 3

Gene SVIP, Length 829 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SVIP-205ENST00000533774 MIB1Q86YT6 1006 aa13.2□□□□□ -0.3
SVIP-205ENST00000533774 PDCL2Q8N4E4 241 aa13.2□□□□□ -0.3
SVIP-205ENST00000533774 TRIML1Q8N9V2 468 aa13.2□□□□□ -0.3
SVIP-205ENST00000533774 SPATA18Q8TC71 538 aa13.2□□□□□ -0.3
SVIP-205ENST00000533774 FAM84AQ96KN4 292 aa13.2□□□□□ -0.3
SVIP-205ENST00000533774 HSPA12BQ96MM6 686 aa13.2□□□□□ -0.3
SVIP-205ENST00000533774 PNMA5Q96PV4 448 aa13.2□□□□□ -0.3
SVIP-205ENST00000533774 MSTO1Q9BUK6 570 aa13.2□□□□□ -0.3
SVIP-205ENST00000533774 IL21RQ9HBE5 538 aa13.2□□□□□ -0.3
SVIP-205ENST00000533774 CD248Q9HCU0 757 aa13.2□□□□□ -0.3
SVIP-205ENST00000533774 GTF3C4Q9UKN8 822 aa13.2□□□□□ -0.3
SVIP-205ENST00000533774 PCOLCE2Q9UKZ9 415 aa13.2□□□□□ -0.3
SVIP-205ENST00000533774 L1RE1Q9UN81 338 aa13.2□□□□□ -0.3
SVIP-205ENST00000533774 DERAQ9Y315 318 aa13.2□□□□□ -0.3
SVIP-205ENST00000533774 MGAQ8IWI9 3026 aa13.19□□□□□ -0.3
SVIP-205ENST00000533774 A0A087WV48 116 aa13.19□□□□□ -0.3
SVIP-205ENST00000533774 A0A1W2PQD8 194 aa13.19□□□□□ -0.3
SVIP-205ENST00000533774 A0A1W2PQF6 199 aa13.19□□□□□ -0.3
SVIP-205ENST00000533774 TRABD2BA6NFA1 517 aa13.19□□□□□ -0.3
SVIP-205ENST00000533774 MYMKA6NI61 221 aa13.19□□□□□ -0.3
SVIP-205ENST00000533774 ANKRD63C9JTQ0 380 aa13.19□□□□□ -0.3
SVIP-205ENST00000533774 HNRNPDLO14979 420 aaKnown RBP13.19□□□□□ -0.3
SVIP-205ENST00000533774 DKK1O94907 266 aa13.19□□□□□ -0.3
SVIP-205ENST00000533774 SYPP08247 313 aa13.19□□□□□ -0.3
SVIP-205ENST00000533774 MAOBP27338 520 aa13.19□□□□□ -0.3
SVIP-205ENST00000533774 WASP42768 502 aa13.19□□□□□ -0.3
SVIP-205ENST00000533774 TOB1P50616 345 aaPredicted RBP13.19□□□□□ -0.3
SVIP-205ENST00000533774 SLC12A3P55017 1021 aa13.19□□□□□ -0.3
SVIP-205ENST00000533774 WNT7BP56706 349 aa13.19□□□□□ -0.3
SVIP-205ENST00000533774 RPL10AP62906 217 aaKnown RBP13.19□□□□□ -0.3
SVIP-205ENST00000533774 TSPY1Q01534 308 aa13.19□□□□□ -0.3
SVIP-205ENST00000533774 GRIK2Q13002 908 aa13.19□□□□□ -0.3
SVIP-205ENST00000533774 RESTQ13127 1097 aa13.19□□□□□ -0.3
SVIP-205ENST00000533774 TRIM29Q14134 588 aa13.19□□□□□ -0.3
SVIP-205ENST00000533774 NFE2Q16621 373 aaPredicted RBP13.19□□□□□ -0.3
SVIP-205ENST00000533774 KYAT1Q16773 422 aa13.19□□□□□ -0.3
SVIP-205ENST00000533774 PLEKHG6Q3KR16 790 aa13.19□□□□□ -0.3
SVIP-205ENST00000533774 INTS6LQ5JSJ4 861 aaKnown RBP13.19□□□□□ -0.3
SVIP-205ENST00000533774 SLC36A4Q6YBV0 504 aa13.19□□□□□ -0.3
SVIP-205ENST00000533774 CENPQQ7L2Z9 268 aaPredicted RBP13.19□□□□□ -0.3
SVIP-205ENST00000533774 CD302Q8IX05 232 aa13.19□□□□□ -0.3
SVIP-205ENST00000533774 KCNN1Q92952 543 aa13.19□□□□□ -0.3
SVIP-205ENST00000533774 PLIN2Q99541 437 aa13.19□□□□□ -0.3
SVIP-205ENST00000533774 TIPINQ9BVW5 301 aa13.19□□□□□ -0.3
SVIP-205ENST00000533774 IKZF4Q9H2S9 585 aa13.19□□□□□ -0.3
SVIP-205ENST00000533774 ABCB6Q9NP58 842 aa13.19□□□□□ -0.3
SVIP-205ENST00000533774 ARHGEF4Q9NR80 690 aa13.19□□□□□ -0.3
SVIP-205ENST00000533774 CYP8B1Q9UNU6 501 aa13.19□□□□□ -0.3
SVIP-205ENST00000533774 APOBEC2Q9Y235 224 aaKnown RBP13.19□□□□□ -0.3
SVIP-205ENST00000533774 TRIM24O15164 1050 aa13.18□□□□□ -0.3
SVIP-205ENST00000533774 ATXN1LP0C7T5 689 aaKnown RBP13.18□□□□□ -0.3
SVIP-205ENST00000533774 EIF2DP41214 584 aaKnown RBP13.18□□□□□ -0.3
SVIP-205ENST00000533774 GRIA2P42262 883 aa13.18□□□□□ -0.3
SVIP-205ENST00000533774 TNFRSF4P43489 277 aa13.18□□□□□ -0.3
SVIP-205ENST00000533774 BNC1Q01954 994 aa13.18□□□□□ -0.3
SVIP-205ENST00000533774 CRELD2Q6UXH1 353 aaPredicted RBP13.18□□□□□ -0.3
SVIP-205ENST00000533774 RABEPKQ7Z6M1 372 aa13.18□□□□□ -0.3
SVIP-205ENST00000533774 SCN4BQ8IWT1 228 aa13.18□□□□□ -0.3
SVIP-205ENST00000533774 SCUBE3Q8IX30 993 aa13.18□□□□□ -0.3
SVIP-205ENST00000533774 SYT2Q8N9I0 419 aaPredicted RBP13.18□□□□□ -0.3
SVIP-205ENST00000533774 BAHD1Q8TBE0 780 aaPredicted RBP13.18□□□□□ -0.3
SVIP-205ENST00000533774 ZNF419Q96HQ0 510 aaPredicted RBP13.18□□□□□ -0.3
SVIP-205ENST00000533774 UBL7Q96S82 380 aaPredicted RBP13.18□□□□□ -0.3
SVIP-205ENST00000533774 ACBD6Q9BR61 282 aa13.18□□□□□ -0.3
SVIP-205ENST00000533774 SLC6A17Q9H1V8 727 aa13.18□□□□□ -0.3
SVIP-205ENST00000533774 SMPD4Q9NXE4 827 aa13.18□□□□□ -0.3
SVIP-205ENST00000533774 DDX43Q9NXZ2 648 aaKnown RBP13.18□□□□□ -0.3
SVIP-205ENST00000533774 KIAA1522Q9P206 1035 aaPredicted RBP13.18□□□□□ -0.3
SVIP-205ENST00000533774 C2CD2Q9Y426 696 aa13.18□□□□□ -0.3
SVIP-205ENST00000533774 PCDHB6Q9Y5E3 794 aa13.18□□□□□ -0.3
SVIP-205ENST00000533774 ATMQ13315 3056 aa13.18□□□□□ -0.3
SVIP-205ENST00000533774 COL6A6A6NMZ7 2263 aa13.17□□□□□ -0.3
SVIP-205ENST00000533774 FAM149AA5PLN7 773 aa13.17□□□□□ -0.3
SVIP-205ENST00000533774 ATP2C2O75185 946 aa13.17□□□□□ -0.3
SVIP-205ENST00000533774 NDUFV2P19404 249 aa13.17□□□□□ -0.3
SVIP-205ENST00000533774 ITPKBP27987 946 aa13.17□□□□□ -0.3
SVIP-205ENST00000533774 SLC7A9P82251 487 aa13.17□□□□□ -0.3
SVIP-205ENST00000533774 ZRSR1Q15695 479 aaKnown RBP13.17□□□□□ -0.3
SVIP-205ENST00000533774 LY6G5CQ5SRR4 150 aa13.17□□□□□ -0.3
SVIP-205ENST00000533774 KRT79Q5XKE5 535 aa13.17□□□□□ -0.3
SVIP-205ENST00000533774 LARP1BQ659C4 914 aaKnown RBP13.17□□□□□ -0.3
SVIP-205ENST00000533774 ETFBKMTQ8IXQ9 262 aa13.17□□□□□ -0.3
SVIP-205ENST00000533774 NAT16Q8N8M0 369 aa13.17□□□□□ -0.3
SVIP-205ENST00000533774 ACOX2Q99424 681 aa13.17□□□□□ -0.3
SVIP-205ENST00000533774 FOXP1Q9H334 677 aaPredicted RBP13.17□□□□□ -0.3
SVIP-205ENST00000533774 ASB7Q9H672 318 aa13.17□□□□□ -0.3
SVIP-205ENST00000533774 CPQQ9Y646 472 aa13.17□□□□□ -0.3
SVIP-205ENST00000533774 OLFM2O95897 454 aa13.16□□□□□ -0.3
SVIP-205ENST00000533774 ADH5P11766 374 aa13.16□□□□□ -0.3
SVIP-205ENST00000533774 SV2CQ496J9 727 aa13.16□□□□□ -0.3
SVIP-205ENST00000533774 CFAP221Q4G0U5 840 aa13.16□□□□□ -0.3
SVIP-205ENST00000533774 HYIQ5T013 277 aa13.16□□□□□ -0.3
SVIP-205ENST00000533774 RGL4Q8IZJ4 473 aa13.16□□□□□ -0.3
SVIP-205ENST00000533774 ZNF513Q8N8E2 541 aaPredicted RBP13.16□□□□□ -0.3
SVIP-205ENST00000533774 FSIP1Q8NA03 581 aa13.16□□□□□ -0.3
SVIP-205ENST00000533774 ZSWIM2Q8NEG5 633 aa13.16□□□□□ -0.3
SVIP-205ENST00000533774 CXorf38Q8TB03 319 aa13.16□□□□□ -0.3
SVIP-205ENST00000533774 PIP4K2CQ8TBX8 421 aa13.16□□□□□ -0.3
SVIP-205ENST00000533774 FIZ1Q96SL8 496 aa13.16□□□□□ -0.3
SVIP-205ENST00000533774 CFAP97Q9P2B7 532 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms