RNA–Protein interactions for RNA: ENST00000533730.5

CASP4-212, Transcript of caspase 4, humanhuman

TSL 1 (best)

Gene CASP4, Length 1,214 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-212ENST00000533730 PPP2R5DQ14738 602 aa8.32□□□□□ -1.08
CASP4-212ENST00000533730 PRSS53Q2L4Q9 553 aa8.32□□□□□ -1.08
CASP4-212ENST00000533730 GFOD2Q3B7J2 385 aa8.32□□□□□ -1.08
CASP4-212ENST00000533730 DCAF4L1Q3SXM0 396 aa8.32□□□□□ -1.08
CASP4-212ENST00000533730 C4orf46Q504U0 113 aa8.32□□□□□ -1.08
CASP4-212ENST00000533730 ATF7IP2Q5U623 682 aa8.32□□□□□ -1.08
CASP4-212ENST00000533730 GLB1LQ6UWU2 654 aa8.32□□□□□ -1.08
CASP4-212ENST00000533730 ZPBP2Q6X784 338 aa8.32□□□□□ -1.08
CASP4-212ENST00000533730 PRR23CQ6ZRP0 262 aa8.32□□□□□ -1.08
CASP4-212ENST00000533730 STXBP4Q6ZWJ1 553 aa8.32□□□□□ -1.08
CASP4-212ENST00000533730 USP53Q70EK8 1073 aa8.32□□□□□ -1.08
CASP4-212ENST00000533730 DYMQ7RTS9 669 aa8.32□□□□□ -1.08
CASP4-212ENST00000533730 HAUS6Q7Z4H7 955 aa8.32□□□□□ -1.08
CASP4-212ENST00000533730 TMCO2Q7Z6W1 182 aaPredicted RBP8.32□□□□□ -1.08
CASP4-212ENST00000533730 MRPL10Q7Z7H8 261 aaKnown RBP8.32□□□□□ -1.08
CASP4-212ENST00000533730 LRRC43Q8N309 656 aa8.32□□□□□ -1.08
CASP4-212ENST00000533730 FSIP1Q8NA03 581 aa8.32□□□□□ -1.08
CASP4-212ENST00000533730 KCT2Q8NC54 265 aa8.32□□□□□ -1.08
CASP4-212ENST00000533730 RNF169Q8NCN4 708 aa8.32□□□□□ -1.08
CASP4-212ENST00000533730 TMEM161BQ8NDZ6 487 aa8.32□□□□□ -1.08
CASP4-212ENST00000533730 ISL2Q96A47 359 aa8.32□□□□□ -1.08
CASP4-212ENST00000533730 DNAJC19Q96DA6 116 aa8.32□□□□□ -1.08
CASP4-212ENST00000533730 TGS1Q96RS0 853 aaKnown RBP8.32□□□□□ -1.08
CASP4-212ENST00000533730 C7orf25Q9BPX7 421 aa8.32□□□□□ -1.08
CASP4-212ENST00000533730 KIFC3Q9BVG8 833 aa8.32□□□□□ -1.08
CASP4-212ENST00000533730 TRIM9Q9C026 710 aa8.32□□□□□ -1.08
CASP4-212ENST00000533730 ATXN3LQ9H3M9 355 aa8.32□□□□□ -1.08
CASP4-212ENST00000533730 NOL6Q9H6R4 1146 aaKnown RBP8.32□□□□□ -1.08
CASP4-212ENST00000533730 RC3H2Q9HBD1 1191 aaKnown RBP8.32□□□□□ -1.08
CASP4-212ENST00000533730 POLD4Q9HCU8 107 aa8.32□□□□□ -1.08
CASP4-212ENST00000533730 OLFML3Q9NRN5 406 aa8.32□□□□□ -1.08
CASP4-212ENST00000533730 PANK4Q9NVE7 773 aa8.32□□□□□ -1.08
CASP4-212ENST00000533730 GOLGA6AQ9NYA3 693 aa8.32□□□□□ -1.08
CASP4-212ENST00000533730 SAMD15Q9P1V8 674 aa8.32□□□□□ -1.08
CASP4-212ENST00000533730 IP6K2Q9UHH9 426 aa8.32□□□□□ -1.08
CASP4-212ENST00000533730 HPSEQ9Y251 543 aa8.32□□□□□ -1.08
CASP4-212ENST00000533730 TNFSF13BQ9Y275 285 aa8.32□□□□□ -1.08
CASP4-212ENST00000533730 SPEF1Q9Y4P9 236 aa8.32□□□□□ -1.08
CASP4-212ENST00000533730 PCDHA9Q9Y5H5 950 aa8.32□□□□□ -1.08
CASP4-212ENST00000533730 PTPRSQ13332 1948 aa8.31□□□□□ -1.08
CASP4-212ENST00000533730 A0A1B0GVL5 298 aa8.31□□□□□ -1.08
CASP4-212ENST00000533730 PVALEFA0A1B0GWK0 134 aa8.31□□□□□ -1.08
CASP4-212ENST00000533730 FRMD3A2A2Y4 597 aa8.31□□□□□ -1.08
CASP4-212ENST00000533730 LINC01553A4QN01 128 aa8.31□□□□□ -1.08
CASP4-212ENST00000533730 TBKBP1A7MCY6 615 aa8.31□□□□□ -1.08
CASP4-212ENST00000533730 B4GALT5O43286 388 aa8.31□□□□□ -1.08
CASP4-212ENST00000533730 TOM1L1O75674 476 aa8.31□□□□□ -1.08
CASP4-212ENST00000533730 RFPL1O75677 317 aa8.31□□□□□ -1.08
CASP4-212ENST00000533730 RB1P06400 928 aa8.31□□□□□ -1.08
CASP4-212ENST00000533730 MYOGP15173 224 aa8.31□□□□□ -1.08
CASP4-212ENST00000533730 ATF7P17544 494 aaPredicted RBP8.31□□□□□ -1.08
CASP4-212ENST00000533730 ECI1P42126 302 aa8.31□□□□□ -1.08
CASP4-212ENST00000533730 ERVK-21P61565 698 aa8.31□□□□□ -1.08
CASP4-212ENST00000533730 ASIC1P78348 528 aa8.31□□□□□ -1.08
CASP4-212ENST00000533730 GTF2BQ00403 316 aa8.31□□□□□ -1.08
CASP4-212ENST00000533730 KYAT1Q16773 422 aa8.31□□□□□ -1.08
CASP4-212ENST00000533730 PTPN21Q16825 1174 aa8.31□□□□□ -1.08
CASP4-212ENST00000533730 HERC4Q5GLZ8 1057 aaPredicted RBP8.31□□□□□ -1.08
CASP4-212ENST00000533730 UBXN11Q5T124 520 aa8.31□□□□□ -1.08
CASP4-212ENST00000533730 ABHD17CQ6PCB6 329 aa8.31□□□□□ -1.08
CASP4-212ENST00000533730 SFR1Q86XK3 245 aa8.31□□□□□ -1.08
CASP4-212ENST00000533730 FAM20CQ8IXL6 584 aa8.31□□□□□ -1.08
CASP4-212ENST00000533730 NXPE1Q8N323 547 aa8.31□□□□□ -1.08
CASP4-212ENST00000533730 DEFB123Q8N688 67 aa8.31□□□□□ -1.08
CASP4-212ENST00000533730 URGCPQ8TCY9 931 aa8.31□□□□□ -1.08
CASP4-212ENST00000533730 UTP4Q969X6 686 aaKnown RBP8.31□□□□□ -1.08
CASP4-212ENST00000533730 CCDC47Q96A33 483 aaKnown RBP8.31□□□□□ -1.08
CASP4-212ENST00000533730 C1orf159Q96HA4 380 aa8.31□□□□□ -1.08
CASP4-212ENST00000533730 CPB2Q96IY4 423 aa8.31□□□□□ -1.08
CASP4-212ENST00000533730 CHAMP1Q96JM3 812 aa8.31□□□□□ -1.08
CASP4-212ENST00000533730 KREMEN1Q96MU8 473 aa8.31□□□□□ -1.08
CASP4-212ENST00000533730 ACO2Q99798 780 aaKnown RBP8.31□□□□□ -1.08
CASP4-212ENST00000533730 FOXQ1Q9C009 403 aa8.31□□□□□ -1.08
CASP4-212ENST00000533730 SEMA6BQ9H3T3 888 aa8.31□□□□□ -1.08
CASP4-212ENST00000533730 PDZD7Q9H5P4 517 aa8.31□□□□□ -1.08
CASP4-212ENST00000533730 MRPL44Q9H9J2 332 aaKnown RBP8.31□□□□□ -1.08
CASP4-212ENST00000533730 RSAD1Q9HA92 442 aa8.31□□□□□ -1.08
CASP4-212ENST00000533730 LUC7LQ9NQ29 371 aaKnown RBP8.31□□□□□ -1.08
CASP4-212ENST00000533730 HOOK1Q9UJC3 728 aaKnown RBP8.31□□□□□ -1.08
CASP4-212ENST00000533730 FBXL21Q9UKT6 434 aa8.31□□□□□ -1.08
CASP4-212ENST00000533730 EXOC7Q9UPT5 735 aa8.31□□□□□ -1.08
CASP4-212ENST00000533730 GIT1Q9Y2X7 761 aa8.31□□□□□ -1.08
CASP4-212ENST00000533730 IPPQ9Y573 584 aa8.31□□□□□ -1.08
CASP4-212ENST00000533730 MYH11P35749 1972 aa8.3□□□□□ -1.08
CASP4-212ENST00000533730 LCHNA4D1U4 455 aa8.3□□□□□ -1.08
CASP4-212ENST00000533730 INPPL1O15357 1258 aa8.3□□□□□ -1.08
CASP4-212ENST00000533730 SART1O43290 800 aaKnown RBP8.3□□□□□ -1.08
CASP4-212ENST00000533730 DYRK3O43781 588 aa8.3□□□□□ -1.08
CASP4-212ENST00000533730 ZNF202O95125 648 aa8.3□□□□□ -1.08
CASP4-212ENST00000533730 PIGRP01833 764 aa8.3□□□□□ -1.08
CASP4-212ENST00000533730 MCF2P10911 925 aa8.3□□□□□ -1.08
CASP4-212ENST00000533730 LAG3P18627 525 aa8.3□□□□□ -1.08
CASP4-212ENST00000533730 HOXC12P31275 282 aa8.3□□□□□ -1.08
CASP4-212ENST00000533730 LIG4P49917 911 aa8.3□□□□□ -1.08
CASP4-212ENST00000533730 NDUFA8P51970 172 aa8.3□□□□□ -1.08
CASP4-212ENST00000533730 RNF4P78317 190 aa8.3□□□□□ -1.08
CASP4-212ENST00000533730 ZNF568Q3ZCX4 644 aa8.3□□□□□ -1.08
CASP4-212ENST00000533730 PAN2Q504Q3 1202 aaKnown RBP8.3□□□□□ -1.08
CASP4-212ENST00000533730 NOMO2Q5JPE7 1267 aa8.3□□□□□ -1.08
CASP4-212ENST00000533730 CLLU1OSQ5K130 101 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms