RNA–Protein interactions for RNA: ENST00000533643.1

COMMD9-208, Transcript of COMM domain containing 9, humanhuman

TSL 2

Gene COMMD9, Length 580 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9-208ENST00000533643 CENPCQ03188 943 aa12.56□□□□□ -0.4
COMMD9-208ENST00000533643 PLD1Q13393 1074 aa12.56□□□□□ -0.4
COMMD9-208ENST00000533643 MTMR3Q13615 1198 aa12.56□□□□□ -0.4
COMMD9-208ENST00000533643 MTF1Q14872 753 aa12.56□□□□□ -0.4
COMMD9-208ENST00000533643 COL19A1Q14993 1142 aa12.56□□□□□ -0.4
COMMD9-208ENST00000533643 SLC18A3Q16572 532 aa12.56□□□□□ -0.4
COMMD9-208ENST00000533643 CTC1Q2NKJ3 1217 aa12.56□□□□□ -0.4
COMMD9-208ENST00000533643 PTPN20Q4JDL3 420 aa12.56□□□□□ -0.4
COMMD9-208ENST00000533643 CCDC122Q5T0U0 273 aa12.56□□□□□ -0.4
COMMD9-208ENST00000533643 ALKBH5Q6P6C2 394 aaKnown RBP12.56□□□□□ -0.4
COMMD9-208ENST00000533643 ELMSAN1Q6PJG2 1045 aa12.56□□□□□ -0.4
COMMD9-208ENST00000533643 TMEM110Q86TL2 294 aa12.56□□□□□ -0.4
COMMD9-208ENST00000533643 ERICH1Q86X53 443 aa12.56□□□□□ -0.4
COMMD9-208ENST00000533643 DNAAF5Q86Y56 855 aa12.56□□□□□ -0.4
COMMD9-208ENST00000533643 PHF13Q86YI8 300 aaPredicted RBP12.56□□□□□ -0.4
COMMD9-208ENST00000533643 NUP93Q8N1F7 819 aa12.56□□□□□ -0.4
COMMD9-208ENST00000533643 C12orf76Q8N812 135 aaPredicted RBP12.56□□□□□ -0.4
COMMD9-208ENST00000533643 CCDC112Q8NEF3 446 aa12.56□□□□□ -0.4
COMMD9-208ENST00000533643 SCAMP5Q8TAC9 235 aa12.56□□□□□ -0.4
COMMD9-208ENST00000533643 TTLL2Q9BWV7 592 aa12.56□□□□□ -0.4
COMMD9-208ENST00000533643 ISCUQ9H1K1 167 aa12.56□□□□□ -0.4
COMMD9-208ENST00000533643 CYLDQ9NQC7 956 aa12.56□□□□□ -0.4
COMMD9-208ENST00000533643 ST7Q9NRC1 585 aa12.56□□□□□ -0.4
COMMD9-208ENST00000533643 SPTLC3Q9NUV7 552 aa12.56□□□□□ -0.4
COMMD9-208ENST00000533643 DZANK1Q9NVP4 752 aa12.56□□□□□ -0.4
COMMD9-208ENST00000533643 TJP2Q9UDY2 1190 aa12.56□□□□□ -0.4
COMMD9-208ENST00000533643 NAGPAQ9UK23 515 aa12.56□□□□□ -0.4
COMMD9-208ENST00000533643 ASB3Q9Y575 518 aa12.56□□□□□ -0.4
COMMD9-208ENST00000533643 EPN1Q9Y6I3 576 aaPredicted RBP12.56□□□□□ -0.4
COMMD9-208ENST00000533643 REV3LO60673 3130 aa12.55□□□□□ -0.4
COMMD9-208ENST00000533643 E5RJQ4 531 aa12.55□□□□□ -0.4
COMMD9-208ENST00000533643 NCK2O43639 380 aa12.55□□□□□ -0.4
COMMD9-208ENST00000533643 PAPLNO95428 1278 aa12.55□□□□□ -0.4
COMMD9-208ENST00000533643 LCA5LO95447 670 aa12.55□□□□□ -0.4
COMMD9-208ENST00000533643 ERBB2P04626 1255 aa12.55□□□□□ -0.4
COMMD9-208ENST00000533643 POU2F2P09086 479 aa12.55□□□□□ -0.4
COMMD9-208ENST00000533643 LCP1P13796 627 aa12.55□□□□□ -0.4
COMMD9-208ENST00000533643 HOXA9P31269 272 aa12.55□□□□□ -0.4
COMMD9-208ENST00000533643 CYLC1P35663 651 aaPredicted RBP12.55□□□□□ -0.4
COMMD9-208ENST00000533643 ACADSBP45954 432 aa12.55□□□□□ -0.4
COMMD9-208ENST00000533643 NSFP46459 744 aaKnown RBP12.55□□□□□ -0.4
COMMD9-208ENST00000533643 TKTL1P51854 596 aa12.55□□□□□ -0.4
COMMD9-208ENST00000533643 SLC5A3P53794 718 aa12.55□□□□□ -0.4
COMMD9-208ENST00000533643 C1QBPQ07021 282 aaKnown RBP12.55□□□□□ -0.4
COMMD9-208ENST00000533643 ADIGQ0VDE8 80 aa12.55□□□□□ -0.4
COMMD9-208ENST00000533643 PTP4A2Q12974 167 aa12.55□□□□□ -0.4
COMMD9-208ENST00000533643 C2CD6Q53TS8 623 aa12.55□□□□□ -0.4
COMMD9-208ENST00000533643 CYP4A22Q5TCH4 519 aa12.55□□□□□ -0.4
COMMD9-208ENST00000533643 ANKRD54Q6NXT1 300 aa12.55□□□□□ -0.4
COMMD9-208ENST00000533643 MMS22LQ6ZRQ5 1243 aa12.55□□□□□ -0.4
COMMD9-208ENST00000533643 DENND5BQ6ZUT9 1274 aa12.55□□□□□ -0.4
COMMD9-208ENST00000533643 MON1BQ7L1V2 547 aa12.55□□□□□ -0.4
COMMD9-208ENST00000533643 DNAJB7Q7Z6W7 309 aaPredicted RBP12.55□□□□□ -0.4
COMMD9-208ENST00000533643 CMASQ8NFW8 434 aaPredicted RBP12.55□□□□□ -0.4
COMMD9-208ENST00000533643 FEZF2Q8TBJ5 459 aa12.55□□□□□ -0.4
COMMD9-208ENST00000533643 PSMG2Q969U7 264 aa12.55□□□□□ -0.4
COMMD9-208ENST00000533643 ZNF707Q96C28 371 aaPredicted RBP12.55□□□□□ -0.4
COMMD9-208ENST00000533643 PRKD2Q9BZL6 878 aa12.55□□□□□ -0.4
COMMD9-208ENST00000533643 ULBP1Q9BZM6 244 aa12.55□□□□□ -0.4
COMMD9-208ENST00000533643 KCNF1Q9H3M0 494 aa12.55□□□□□ -0.4
COMMD9-208ENST00000533643 LRRC4Q9HBW1 653 aa12.55□□□□□ -0.4
COMMD9-208ENST00000533643 COMMD8Q9NX08 183 aa12.55□□□□□ -0.4
COMMD9-208ENST00000533643 ZDHHC7Q9NXF8 308 aa12.55□□□□□ -0.4
COMMD9-208ENST00000533643 CLEC1BQ9P126 229 aa12.55□□□□□ -0.4
COMMD9-208ENST00000533643 USP3Q9Y6I4 520 aa12.55□□□□□ -0.4
COMMD9-208ENST00000533643 CCDC195A0A1B0GUA6 201 aa12.54□□□□□ -0.4
COMMD9-208ENST00000533643 EIF3CLB5ME19 914 aaKnown RBP12.54□□□□□ -0.4
COMMD9-208ENST00000533643 PAPSS1O43252 624 aaPredicted RBP12.54□□□□□ -0.4
COMMD9-208ENST00000533643 RTN3O95197 1032 aaPredicted RBP12.54□□□□□ -0.4
COMMD9-208ENST00000533643 NDUFA10O95299 355 aa12.54□□□□□ -0.4
COMMD9-208ENST00000533643 CSH1P0DML2 217 aa12.54□□□□□ -0.4
COMMD9-208ENST00000533643 CSH2P0DML3 217 aa12.54□□□□□ -0.4
COMMD9-208ENST00000533643 SRGAP2BP0DMP2 458 aa12.54□□□□□ -0.4
COMMD9-208ENST00000533643 FOSL2P15408 326 aa12.54□□□□□ -0.4
COMMD9-208ENST00000533643 YWHAQP27348 245 aa12.54□□□□□ -0.4
COMMD9-208ENST00000533643 LTBRP36941 435 aa12.54□□□□□ -0.4
COMMD9-208ENST00000533643 DLX2Q07687 328 aaPredicted RBP12.54□□□□□ -0.4
COMMD9-208ENST00000533643 VEPH1Q14D04 833 aa12.54□□□□□ -0.4
COMMD9-208ENST00000533643 RARS2Q5T160 578 aaKnown RBP12.54□□□□□ -0.4
COMMD9-208ENST00000533643 PM20D1Q6GTS8 502 aa12.54□□□□□ -0.4
COMMD9-208ENST00000533643 PPP1R2P3Q6NXS1 205 aa12.54□□□□□ -0.4
COMMD9-208ENST00000533643 SYCE2Q6PIF2 218 aa12.54□□□□□ -0.4
COMMD9-208ENST00000533643 TMC5Q6UXY8 1006 aa12.54□□□□□ -0.4
COMMD9-208ENST00000533643 ITIH5Q86UX2 942 aa12.54□□□□□ -0.4
COMMD9-208ENST00000533643 XYLT1Q86Y38 959 aa12.54□□□□□ -0.4
COMMD9-208ENST00000533643 SCUBE3Q8IX30 993 aa12.54□□□□□ -0.4
COMMD9-208ENST00000533643 MCOLN2Q8IZK6 566 aa12.54□□□□□ -0.4
COMMD9-208ENST00000533643 HS6ST3Q8IZP7 471 aa12.54□□□□□ -0.4
COMMD9-208ENST00000533643 SIX6OS1Q8N1H7 587 aa12.54□□□□□ -0.4
COMMD9-208ENST00000533643 ELMOD1Q8N336 334 aa12.54□□□□□ -0.4
COMMD9-208ENST00000533643 MSANTD4Q8NCY6 345 aa12.54□□□□□ -0.4
COMMD9-208ENST00000533643 CLEC4CQ8WTT0 213 aa12.54□□□□□ -0.4
COMMD9-208ENST00000533643 NDRG1Q92597 394 aaKnown RBP12.54□□□□□ -0.4
COMMD9-208ENST00000533643 C18orf8Q96DM3 657 aa12.54□□□□□ -0.4
COMMD9-208ENST00000533643 MYRFLQ96LU7 910 aa12.54□□□□□ -0.4
COMMD9-208ENST00000533643 ZNF512Q96ME7 567 aaPredicted RBP12.54□□□□□ -0.4
COMMD9-208ENST00000533643 ZNF830Q96NB3 372 aaPredicted RBP12.54□□□□□ -0.4
COMMD9-208ENST00000533643 EIF3CQ99613 913 aaKnown RBP12.54□□□□□ -0.4
COMMD9-208ENST00000533643 C11orf70Q9BRQ4 267 aa12.54□□□□□ -0.4
COMMD9-208ENST00000533643 LRRC3Q9BY71 257 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms