RNA–Protein interactions for RNA: ENST00000533562.1

CAPRIN1-213, Transcript of cell cycle associated protein 1, humanhuman

TSL 2

Gene CAPRIN1, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-213ENST00000533562 MED10Q9BTT4 135 aa13.2□□□□□ -0.3
CAPRIN1-213ENST00000533562 B3GNT5Q9BYG0 378 aa13.2□□□□□ -0.3
CAPRIN1-213ENST00000533562 ZNF518BQ9C0D4 1074 aa13.2□□□□□ -0.3
CAPRIN1-213ENST00000533562 LINC00597Q9H2U6 94 aa13.2□□□□□ -0.3
CAPRIN1-213ENST00000533562 USP18Q9UMW8 372 aa13.2□□□□□ -0.3
CAPRIN1-213ENST00000533562 ZDHHC9Q9Y397 364 aa13.2□□□□□ -0.3
CAPRIN1-213ENST00000533562 NME7Q9Y5B8 376 aa13.2□□□□□ -0.3
CAPRIN1-213ENST00000533562 WNT6Q9Y6F9 365 aa13.2□□□□□ -0.3
CAPRIN1-213ENST00000533562 KIF26AQ9ULI4 1882 aaPredicted RBP13.2□□□□□ -0.3
CAPRIN1-213ENST00000533562 ATG2BQ96BY7 2078 aa13.2□□□□□ -0.3
CAPRIN1-213ENST00000533562 OBSL1O75147 1896 aa13.19□□□□□ -0.3
CAPRIN1-213ENST00000533562 CCDC163A0A0D9SF12 145 aa13.19□□□□□ -0.3
CAPRIN1-213ENST00000533562 FAM237AA0A1B0GTK4 181 aa13.19□□□□□ -0.3
CAPRIN1-213ENST00000533562 LEFTY2O00292 366 aa13.19□□□□□ -0.3
CAPRIN1-213ENST00000533562 CLDN5O00501 218 aa13.19□□□□□ -0.3
CAPRIN1-213ENST00000533562 SLC9A3R1O14745 358 aaPredicted RBP13.19□□□□□ -0.3
CAPRIN1-213ENST00000533562 LRP3O75074 770 aa13.19□□□□□ -0.3
CAPRIN1-213ENST00000533562 RNF40O75150 1001 aa13.19□□□□□ -0.3
CAPRIN1-213ENST00000533562 VNN1O95497 513 aa13.19□□□□□ -0.3
CAPRIN1-213ENST00000533562 EGFP01133 1207 aa13.19□□□□□ -0.3
CAPRIN1-213ENST00000533562 NDUFA8P51970 172 aa13.19□□□□□ -0.3
CAPRIN1-213ENST00000533562 DMWDQ09019 674 aa13.19□□□□□ -0.3
CAPRIN1-213ENST00000533562 RSPO4Q2I0M5 234 aaPredicted RBP13.19□□□□□ -0.3
CAPRIN1-213ENST00000533562 ZACNQ401N2 412 aa13.19□□□□□ -0.3
CAPRIN1-213ENST00000533562 CEP68Q76N32 757 aa13.19□□□□□ -0.3
CAPRIN1-213ENST00000533562 WDR5BQ86VZ2 330 aa13.19□□□□□ -0.3
CAPRIN1-213ENST00000533562 CAMKK1Q8N5S9 505 aa13.19□□□□□ -0.3
CAPRIN1-213ENST00000533562 PDZD8Q8NEN9 1154 aa13.19□□□□□ -0.3
CAPRIN1-213ENST00000533562 OVCA2Q8WZ82 227 aa13.19□□□□□ -0.3
CAPRIN1-213ENST00000533562 CD101Q93033 1021 aa13.19□□□□□ -0.3
CAPRIN1-213ENST00000533562 CHFRQ96EP1 664 aa13.19□□□□□ -0.3
CAPRIN1-213ENST00000533562 RNF38Q9H0F5 515 aa13.19□□□□□ -0.3
CAPRIN1-213ENST00000533562 SMYD3Q9H7B4 428 aa13.19□□□□□ -0.3
CAPRIN1-213ENST00000533562 FBRSL1Q9HCM7 1045 aaKnown RBP13.19□□□□□ -0.3
CAPRIN1-213ENST00000533562 C2orf42Q9NWW7 574 aa13.19□□□□□ -0.3
CAPRIN1-213ENST00000533562 DLL3Q9NYJ7 618 aa13.19□□□□□ -0.3
CAPRIN1-213ENST00000533562 TRAF3IP3Q9Y228 551 aa13.19□□□□□ -0.3
CAPRIN1-213ENST00000533562 GREB1Q4ZG55 1949 aa13.19□□□□□ -0.3
CAPRIN1-213ENST00000533562 ANAPC1Q9H1A4 1944 aa13.19□□□□□ -0.3
CAPRIN1-213ENST00000533562 A0A1W2PQ27 194 aa13.18□□□□□ -0.3
CAPRIN1-213ENST00000533562 A0A1W2PQ64 194 aa13.18□□□□□ -0.3
CAPRIN1-213ENST00000533562 A0A1W2PQD8 194 aa13.18□□□□□ -0.3
CAPRIN1-213ENST00000533562 MAPK13O15264 365 aa13.18□□□□□ -0.3
CAPRIN1-213ENST00000533562 RHOBTB3O94955 611 aa13.18□□□□□ -0.3
CAPRIN1-213ENST00000533562 RPL13P26373 211 aaKnown RBP13.18□□□□□ -0.3
CAPRIN1-213ENST00000533562 CACNA2D1P54289 1103 aa13.18□□□□□ -0.3
CAPRIN1-213ENST00000533562 DLG4P78352 724 aa13.18□□□□□ -0.3
CAPRIN1-213ENST00000533562 IFRD2Q12894 506 aaPredicted RBP13.18□□□□□ -0.3
CAPRIN1-213ENST00000533562 SCARA5Q6ZMJ2 495 aa13.18□□□□□ -0.3
CAPRIN1-213ENST00000533562 SV2AQ7L0J3 742 aa13.18□□□□□ -0.3
CAPRIN1-213ENST00000533562 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.18□□□□□ -0.3
CAPRIN1-213ENST00000533562 DDX42Q86XP3 938 aaKnown RBP eCLIP13.18□□□□□ -0.3
CAPRIN1-213ENST00000533562 ADGRG2Q8IZP9 1017 aa13.18□□□□□ -0.3
CAPRIN1-213ENST00000533562 FBXO32Q969P5 355 aa13.18□□□□□ -0.3
CAPRIN1-213ENST00000533562 SMARCD1Q96GM5 515 aa13.18□□□□□ -0.3
CAPRIN1-213ENST00000533562 KCNK16Q96T55 309 aa13.18□□□□□ -0.3
CAPRIN1-213ENST00000533562 DMAP1Q9NPF5 467 aaPredicted RBP13.18□□□□□ -0.3
CAPRIN1-213ENST00000533562 COMMD8Q9NX08 183 aa13.18□□□□□ -0.3
CAPRIN1-213ENST00000533562 NCOR2Q9Y618 2525 aa13.18□□□□□ -0.3
CAPRIN1-213ENST00000533562 PTPRDP23468 1912 aa13.17□□□□□ -0.3
CAPRIN1-213ENST00000533562 FOXD2O60548 495 aaPredicted RBP13.17□□□□□ -0.3
CAPRIN1-213ENST00000533562 OLFM2O95897 454 aa13.17□□□□□ -0.3
CAPRIN1-213ENST00000533562 OAS1P00973 400 aaKnown RBP13.17□□□□□ -0.3
CAPRIN1-213ENST00000533562 KRT13P13646 458 aa13.17□□□□□ -0.3
CAPRIN1-213ENST00000533562 TGM1P22735 817 aa13.17□□□□□ -0.3
CAPRIN1-213ENST00000533562 NR2F2P24468 414 aa13.17□□□□□ -0.3
CAPRIN1-213ENST00000533562 RAP1GAPP47736 663 aa13.17□□□□□ -0.3
CAPRIN1-213ENST00000533562 VAMP7P51809 220 aa13.17□□□□□ -0.3
CAPRIN1-213ENST00000533562 ZXDBP98169 803 aa13.17□□□□□ -0.3
CAPRIN1-213ENST00000533562 SPEM2Q0P670 501 aa13.17□□□□□ -0.3
CAPRIN1-213ENST00000533562 DPYDQ12882 1025 aa13.17□□□□□ -0.3
CAPRIN1-213ENST00000533562 SRSF5Q13243 272 aaKnown RBP13.17□□□□□ -0.3
CAPRIN1-213ENST00000533562 NFIL3Q16649 462 aa13.17□□□□□ -0.3
CAPRIN1-213ENST00000533562 HECTD3Q5T447 861 aa13.17□□□□□ -0.3
CAPRIN1-213ENST00000533562 PKN3Q6P5Z2 889 aa13.17□□□□□ -0.3
CAPRIN1-213ENST00000533562 KRBA2Q6ZNG9 492 aa13.17□□□□□ -0.3
CAPRIN1-213ENST00000533562 INTS8Q75QN2 995 aaKnown RBP13.17□□□□□ -0.3
CAPRIN1-213ENST00000533562 ACOT1Q86TX2 421 aa13.17□□□□□ -0.3
CAPRIN1-213ENST00000533562 UNC93AQ86WB7 457 aa13.17□□□□□ -0.3
CAPRIN1-213ENST00000533562 CRYBG2Q8N1P7 616 aa13.17□□□□□ -0.3
CAPRIN1-213ENST00000533562 IMPG2Q9BZV3 1241 aa13.17□□□□□ -0.3
CAPRIN1-213ENST00000533562 DNAI2Q9GZS0 605 aa13.17□□□□□ -0.3
CAPRIN1-213ENST00000533562 TMEM30AQ9NV96 361 aa13.17□□□□□ -0.3
CAPRIN1-213ENST00000533562 CHORDC1Q9UHD1 332 aaPredicted RBP13.17□□□□□ -0.3
CAPRIN1-213ENST00000533562 CDV3Q9UKY7 258 aaKnown RBP13.17□□□□□ -0.3
CAPRIN1-213ENST00000533562 CPQQ9Y646 472 aa13.17□□□□□ -0.3
CAPRIN1-213ENST00000533562 RPP40O75818 363 aaKnown RBP13.16□□□□□ -0.3
CAPRIN1-213ENST00000533562 AP1G2O75843 785 aa13.16□□□□□ -0.3
CAPRIN1-213ENST00000533562 ZNF202O95125 648 aa13.16□□□□□ -0.3
CAPRIN1-213ENST00000533562 ASS1P00966 412 aaKnown RBP13.16□□□□□ -0.3
CAPRIN1-213ENST00000533562 CCDC192P0DO97 292 aa13.16□□□□□ -0.3
CAPRIN1-213ENST00000533562 MBL2P11226 248 aaPredicted RBP13.16□□□□□ -0.3
CAPRIN1-213ENST00000533562 PSMC2P35998 433 aaKnown RBP13.16□□□□□ -0.3
CAPRIN1-213ENST00000533562 PIK3CAP42336 1068 aa13.16□□□□□ -0.3
CAPRIN1-213ENST00000533562 NDST1P52848 882 aa13.16□□□□□ -0.3
CAPRIN1-213ENST00000533562 SLC5A3P53794 718 aa13.16□□□□□ -0.3
CAPRIN1-213ENST00000533562 ENPEPQ07075 957 aa13.16□□□□□ -0.3
CAPRIN1-213ENST00000533562 ADAM9Q13443 819 aa13.16□□□□□ -0.3
CAPRIN1-213ENST00000533562 SNX30Q5VWJ9 437 aa13.16□□□□□ -0.3
CAPRIN1-213ENST00000533562 PAQR9Q6ZVX9 377 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms