RNA–Protein interactions for RNA: ENST00000533222.5

CD44-236, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 581 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-236ENST00000533222 PARD3Q8TEW0 1356 aa5.81□□□□□ -1.48
CD44-236ENST00000533222 GRIN2DO15399 1336 aa5.81□□□□□ -1.48
CD44-236ENST00000533222 TTC21BQ7Z4L5 1316 aa5.81□□□□□ -1.48
CD44-236ENST00000533222 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP5.81□□□□□ -1.48
CD44-236ENST00000533222 SMIM31A0A1B0GVY4 71 aa5.81□□□□□ -1.48
CD44-236ENST00000533222 DPPA5A6NC42 116 aa5.81□□□□□ -1.48
CD44-236ENST00000533222 BECN2A8MW95 431 aa5.81□□□□□ -1.48
CD44-236ENST00000533222 TMEM114B3SHH9 223 aa5.81□□□□□ -1.48
CD44-236ENST00000533222 B4E1Z4 1266 aa5.81□□□□□ -1.48
CD44-236ENST00000533222 PRRT4C9JH25 899 aa5.81□□□□□ -1.48
CD44-236ENST00000533222 PLOD2O00469 737 aa5.81□□□□□ -1.48
CD44-236ENST00000533222 SCDO00767 359 aa5.81□□□□□ -1.48
CD44-236ENST00000533222 XPO1O14980 1071 aaKnown RBP5.81□□□□□ -1.48
CD44-236ENST00000533222 BET1O15155 118 aa5.81□□□□□ -1.48
CD44-236ENST00000533222 TMCC2O75069 709 aa5.81□□□□□ -1.48
CD44-236ENST00000533222 SEMA7AO75326 666 aa5.81□□□□□ -1.48
CD44-236ENST00000533222 APBB3O95704 486 aa5.81□□□□□ -1.48
CD44-236ENST00000533222 FAM107AO95990 144 aa5.81□□□□□ -1.48
CD44-236ENST00000533222 HMGN1P05114 100 aa5.81□□□□□ -1.48
CD44-236ENST00000533222 RPS17P08708 135 aaKnown RBP5.81□□□□□ -1.48
CD44-236ENST00000533222 ZBTB48P10074 688 aaPredicted RBP5.81□□□□□ -1.48
CD44-236ENST00000533222 ZNF3P17036 446 aa5.81□□□□□ -1.48
CD44-236ENST00000533222 POU3F2P20265 443 aaPredicted RBP5.81□□□□□ -1.48
CD44-236ENST00000533222 IGFBP6P24592 240 aaPredicted RBP5.81□□□□□ -1.48
CD44-236ENST00000533222 TKTP29401 623 aaKnown RBP5.81□□□□□ -1.48
CD44-236ENST00000533222 MTHFRP42898 656 aa5.81□□□□□ -1.48
CD44-236ENST00000533222 HAAOP46952 286 aa5.81□□□□□ -1.48
CD44-236ENST00000533222 POLR2FP61218 127 aaKnown RBP5.81□□□□□ -1.48
CD44-236ENST00000533222 CCZ1BP86790 482 aa5.81□□□□□ -1.48
CD44-236ENST00000533222 CCZ1P86791 482 aaPredicted RBP5.81□□□□□ -1.48
CD44-236ENST00000533222 CETN1Q12798 172 aa5.81□□□□□ -1.48
CD44-236ENST00000533222 BNIP1Q12981 228 aa5.81□□□□□ -1.48
CD44-236ENST00000533222 CYLC2Q14093 348 aaPredicted RBP5.81□□□□□ -1.48
CD44-236ENST00000533222 TRIM14Q14142 442 aa5.81□□□□□ -1.48
CD44-236ENST00000533222 SSPNQ14714 243 aa5.81□□□□□ -1.48
CD44-236ENST00000533222 KPNB1Q14974 876 aaKnown RBP5.81□□□□□ -1.48
CD44-236ENST00000533222 NR1D2Q14995 579 aa5.81□□□□□ -1.48
CD44-236ENST00000533222 UBE3CQ15386 1083 aa5.81□□□□□ -1.48
CD44-236ENST00000533222 MOGQ16653 247 aa5.81□□□□□ -1.48
CD44-236ENST00000533222 CR1LQ2VPA4 569 aa5.81□□□□□ -1.48
CD44-236ENST00000533222 FIGNQ5HY92 759 aa5.81□□□□□ -1.48
CD44-236ENST00000533222 TMTC4Q5T4D3 741 aa5.81□□□□□ -1.48
CD44-236ENST00000533222 SYDE2Q5VT97 1194 aa5.81□□□□□ -1.48
CD44-236ENST00000533222 ALS2CLQ60I27 953 aa5.81□□□□□ -1.48
CD44-236ENST00000533222 IQSEC1Q6DN90 963 aa5.81□□□□□ -1.48
CD44-236ENST00000533222 CYP4F22Q6NT55 531 aa5.81□□□□□ -1.48
CD44-236ENST00000533222 HHIPL2Q6UWX4 724 aa5.81□□□□□ -1.48
CD44-236ENST00000533222 ETV3LQ6ZN32 361 aa5.81□□□□□ -1.48
CD44-236ENST00000533222 UBE3BQ7Z3V4 1068 aa5.81□□□□□ -1.48
CD44-236ENST00000533222 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.81□□□□□ -1.48
CD44-236ENST00000533222 STRA8Q7Z7C7 330 aa5.81□□□□□ -1.48
CD44-236ENST00000533222 STK32CQ86UX6 486 aa5.81□□□□□ -1.48
CD44-236ENST00000533222 HACE1Q8IYU2 909 aa5.81□□□□□ -1.48
CD44-236ENST00000533222 CAMKK1Q8N5S9 505 aa5.81□□□□□ -1.48
CD44-236ENST00000533222 C2orf69Q8N8R5 385 aa5.81□□□□□ -1.48
CD44-236ENST00000533222 LINS1Q8NG48 757 aa5.81□□□□□ -1.48
CD44-236ENST00000533222 CAGE1Q8TC20 777 aa5.81□□□□□ -1.48
CD44-236ENST00000533222 PHOSPHO1Q8TCT1 267 aa5.81□□□□□ -1.48
CD44-236ENST00000533222 FNIP1Q8TF40 1166 aa5.81□□□□□ -1.48
CD44-236ENST00000533222 STARD8Q92502 1023 aa5.81□□□□□ -1.48
CD44-236ENST00000533222 HAUS1Q96CS2 278 aa5.81□□□□□ -1.48
CD44-236ENST00000533222 RMDN1Q96DB5 314 aa5.81□□□□□ -1.48
CD44-236ENST00000533222 STAMBPL1Q96FJ0 436 aa5.81□□□□□ -1.48
CD44-236ENST00000533222 WNK4Q96J92 1243 aa5.81□□□□□ -1.48
CD44-236ENST00000533222 NSMCE3Q96MG7 304 aa5.81□□□□□ -1.48
CD44-236ENST00000533222 ZNF570Q96NI8 536 aa5.81□□□□□ -1.48
CD44-236ENST00000533222 TSGA13Q96PP4 275 aa5.81□□□□□ -1.48
CD44-236ENST00000533222 PRAM1Q96QH2 718 aa5.81□□□□□ -1.48
CD44-236ENST00000533222 GAL3ST1Q99999 423 aa5.81□□□□□ -1.48
CD44-236ENST00000533222 GPATCH1Q9BRR8 931 aaKnown RBP5.81□□□□□ -1.48
CD44-236ENST00000533222 SHCBP1LQ9BZQ2 653 aa5.81□□□□□ -1.48
CD44-236ENST00000533222 CDH19Q9H159 772 aa5.81□□□□□ -1.48
CD44-236ENST00000533222 PCDH12Q9NPG4 1184 aa5.81□□□□□ -1.48
CD44-236ENST00000533222 FANCFQ9NPI8 374 aa5.81□□□□□ -1.48
CD44-236ENST00000533222 DIABLOQ9NR28 239 aa5.81□□□□□ -1.48
CD44-236ENST00000533222 DDX56Q9NY93 547 aaKnown RBP5.81□□□□□ -1.48
CD44-236ENST00000533222 EVLQ9UI08 416 aaPredicted RBP5.81□□□□□ -1.48
CD44-236ENST00000533222 SCOCQ9UIL1 159 aa5.81□□□□□ -1.48
CD44-236ENST00000533222 ANAPC5Q9UJX4 755 aa5.81□□□□□ -1.48
CD44-236ENST00000533222 RIMKLBQ9ULI2 386 aa5.81□□□□□ -1.48
CD44-236ENST00000533222 VANGL2Q9ULK5 521 aa5.81□□□□□ -1.48
CD44-236ENST00000533222 EXOC7Q9UPT5 735 aa5.81□□□□□ -1.48
CD44-236ENST00000533222 APOBEC2Q9Y235 224 aaKnown RBP5.81□□□□□ -1.48
CD44-236ENST00000533222 TBC1D30Q9Y2I9 924 aa5.81□□□□□ -1.48
CD44-236ENST00000533222 TEX14Q8IWB6 1497 aa5.81□□□□□ -1.48
CD44-236ENST00000533222 CFAP74Q9C0B2 1584 aa5.8□□□□□ -1.48
CD44-236ENST00000533222 ZNF536O15090 1300 aa5.8□□□□□ -1.48
CD44-236ENST00000533222 EHBP1L1Q8N3D4 1523 aa5.8□□□□□ -1.48
CD44-236ENST00000533222 KDM5DQ9BY66 1539 aa5.8□□□□□ -1.48
CD44-236ENST00000533222 CCDC141Q6ZP82 1450 aa5.8□□□□□ -1.48
CD44-236ENST00000533222 C5orf60A6NFR6 353 aa5.8□□□□□ -1.48
CD44-236ENST00000533222 B8ZZF3 427 aa5.8□□□□□ -1.48
CD44-236ENST00000533222 AP3B1O00203 1094 aa5.8□□□□□ -1.48
CD44-236ENST00000533222 DVL2O14641 736 aa5.8□□□□□ -1.48
CD44-236ENST00000533222 GSTA4O15217 222 aa5.8□□□□□ -1.48
CD44-236ENST00000533222 KLHL41O60662 606 aa5.8□□□□□ -1.48
CD44-236ENST00000533222 LRG1P02750 347 aa5.8□□□□□ -1.48
CD44-236ENST00000533222 ALOX5P09917 674 aa5.8□□□□□ -1.48
CD44-236ENST00000533222 GSTT2P0CG29 244 aa5.8□□□□□ -1.48
CD44-236ENST00000533222 GSTT2BP0CG30 244 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms