RNA–Protein interactions for RNA: ENST00000533154.1

C11orf54-212, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 1 (best)

Gene C11orf54, Length 903 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-212ENST00000533154 BDNFP23560 247 aa5.9□□□□□ -1.46
C11orf54-212ENST00000533154 PRDX5P30044 214 aa5.9□□□□□ -1.46
C11orf54-212ENST00000533154 MAN1A1P33908 653 aa5.9□□□□□ -1.46
C11orf54-212ENST00000533154 EIF5P55010 431 aaKnown RBP5.9□□□□□ -1.46
C11orf54-212ENST00000533154 SUMO3P55854 103 aaPredicted RBP5.9□□□□□ -1.46
C11orf54-212ENST00000533154 ITGA1P56199 1179 aa5.9□□□□□ -1.46
C11orf54-212ENST00000533154 PER3P56645 1201 aa5.9□□□□□ -1.46
C11orf54-212ENST00000533154 TRDNQ13061 729 aa5.9□□□□□ -1.46
C11orf54-212ENST00000533154 RTP5Q14D33 572 aa5.9□□□□□ -1.46
C11orf54-212ENST00000533154 EIF4HQ15056 248 aaKnown RBP5.9□□□□□ -1.46
C11orf54-212ENST00000533154 TPD52L1Q16890 204 aaPredicted RBP5.9□□□□□ -1.46
C11orf54-212ENST00000533154 ALDH1L2Q3SY69 923 aa5.9□□□□□ -1.46
C11orf54-212ENST00000533154 ANKRD45Q5TZF3 282 aa5.9□□□□□ -1.46
C11orf54-212ENST00000533154 MCTP2Q6DN12 878 aa5.9□□□□□ -1.46
C11orf54-212ENST00000533154 ZSCAN25Q6NSZ9 544 aa5.9□□□□□ -1.46
C11orf54-212ENST00000533154 LVRNQ6Q4G3 990 aa5.9□□□□□ -1.46
C11orf54-212ENST00000533154 CASC1Q6TDU7 716 aa5.9□□□□□ -1.46
C11orf54-212ENST00000533154 PLA2G4DQ86XP0 818 aa5.9□□□□□ -1.46
C11orf54-212ENST00000533154 CACNA2D3Q8IZS8 1091 aa5.9□□□□□ -1.46
C11orf54-212ENST00000533154 PQLC1Q8N2U9 271 aa5.9□□□□□ -1.46
C11orf54-212ENST00000533154 SH2D3CQ8N5H7 860 aa5.9□□□□□ -1.46
C11orf54-212ENST00000533154 TTLL6Q8N841 843 aa5.9□□□□□ -1.46
C11orf54-212ENST00000533154 SLC16A11Q8NCK7 471 aa5.9□□□□□ -1.46
C11orf54-212ENST00000533154 TRAPPC12Q8WVT3 735 aa5.9□□□□□ -1.46
C11orf54-212ENST00000533154 UIMC1Q96RL1 719 aa5.9□□□□□ -1.46
C11orf54-212ENST00000533154 TMEM120AQ9BXJ8 343 aa5.9□□□□□ -1.46
C11orf54-212ENST00000533154 EIF2AQ9BY44 585 aaKnown RBP5.9□□□□□ -1.46
C11orf54-212ENST00000533154 MRPL46Q9H2W6 279 aaKnown RBP5.9□□□□□ -1.46
C11orf54-212ENST00000533154 DEF6Q9H4E7 631 aa5.9□□□□□ -1.46
C11orf54-212ENST00000533154 CXorf56Q9H5V9 222 aa5.9□□□□□ -1.46
C11orf54-212ENST00000533154 TMEM140Q9NV12 185 aa5.9□□□□□ -1.46
C11orf54-212ENST00000533154 SIRT5Q9NXA8 310 aa5.9□□□□□ -1.46
C11orf54-212ENST00000533154 COL20A1Q9P218 1284 aa5.9□□□□□ -1.46
C11orf54-212ENST00000533154 CPA4Q9UI42 421 aa5.9□□□□□ -1.46
C11orf54-212ENST00000533154 FBXO9Q9UK97 447 aaPredicted RBP5.9□□□□□ -1.46
C11orf54-212ENST00000533154 GJD2Q9UKL4 321 aa5.9□□□□□ -1.46
C11orf54-212ENST00000533154 MAGED2Q9UNF1 606 aaPredicted RBP5.9□□□□□ -1.46
C11orf54-212ENST00000533154 MED16Q9Y2X0 877 aa5.9□□□□□ -1.46
C11orf54-212ENST00000533154 IRS2Q9Y4H2 1338 aa5.9□□□□□ -1.47
C11orf54-212ENST00000533154 TIAM2Q8IVF5 1701 aa5.9□□□□□ -1.47
C11orf54-212ENST00000533154 UBR2Q8IWV8 1755 aa5.9□□□□□ -1.47
C11orf54-212ENST00000533154 H0YIN7 160 aa5.89□□□□□ -1.47
C11orf54-212ENST00000533154 M0R3H8 397 aa5.89□□□□□ -1.47
C11orf54-212ENST00000533154 HSPA1AP0DMV8 641 aaKnown RBP5.89□□□□□ -1.47
C11orf54-212ENST00000533154 HSPA1BP0DMV9 641 aaKnown RBP5.89□□□□□ -1.47
C11orf54-212ENST00000533154 HARSP12081 509 aaKnown RBP5.89□□□□□ -1.47
C11orf54-212ENST00000533154 TNFRSF1AP19438 455 aa5.89□□□□□ -1.47
C11orf54-212ENST00000533154 DDCP20711 480 aa5.89□□□□□ -1.47
C11orf54-212ENST00000533154 SMARCA1P28370 1054 aa5.89□□□□□ -1.47
C11orf54-212ENST00000533154 ALDH9A1P49189 494 aa5.89□□□□□ -1.47
C11orf54-212ENST00000533154 CTXN1P60606 82 aa5.89□□□□□ -1.47
C11orf54-212ENST00000533154 HTRA4P83105 476 aaPredicted RBP5.89□□□□□ -1.47
C11orf54-212ENST00000533154 FOXO1Q12778 655 aa5.89□□□□□ -1.47
C11orf54-212ENST00000533154 MTM1Q13496 603 aa5.89□□□□□ -1.47
C11orf54-212ENST00000533154 TARBP2Q15633 366 aaKnown RBP5.89□□□□□ -1.47
C11orf54-212ENST00000533154 PTPN14Q15678 1187 aa5.89□□□□□ -1.47
C11orf54-212ENST00000533154 ARL13BQ3SXY8 428 aa5.89□□□□□ -1.47
C11orf54-212ENST00000533154 FLYWCH1Q4VC44 716 aa5.89□□□□□ -1.47
C11orf54-212ENST00000533154 KHDC1LQ5JSQ8 128 aa5.89□□□□□ -1.47
C11orf54-212ENST00000533154 JAKMIP3Q5VZ66 844 aa5.89□□□□□ -1.47
C11orf54-212ENST00000533154 TBC1D9BQ66K14 1250 aa5.89□□□□□ -1.47
C11orf54-212ENST00000533154 CCDC186Q7Z3E2 898 aa5.89□□□□□ -1.47
C11orf54-212ENST00000533154 B3GNT8Q7Z7M8 397 aa5.89□□□□□ -1.47
C11orf54-212ENST00000533154 PPP1R3BQ86XI6 285 aa5.89□□□□□ -1.47
C11orf54-212ENST00000533154 ANKRD18AQ8IVF6 992 aa5.89□□□□□ -1.47
C11orf54-212ENST00000533154 MSL3Q8N5Y2 521 aaKnown RBP5.89□□□□□ -1.47
C11orf54-212ENST00000533154 ATP11CQ8NB49 1132 aa5.89□□□□□ -1.47
C11orf54-212ENST00000533154 SPC24Q8NBT2 197 aa5.89□□□□□ -1.47
C11orf54-212ENST00000533154 TDRD7Q8NHU6 1098 aaKnown RBP5.89□□□□□ -1.47
C11orf54-212ENST00000533154 CCHCR1Q8TD31 782 aa5.89□□□□□ -1.47
C11orf54-212ENST00000533154 GTF3C6Q969F1 213 aa5.89□□□□□ -1.47
C11orf54-212ENST00000533154 SMARCE1Q969G3 411 aa5.89□□□□□ -1.47
C11orf54-212ENST00000533154 GFM2Q969S9 779 aaKnown RBP5.89□□□□□ -1.47
C11orf54-212ENST00000533154 UHRF1Q96T88 793 aaPredicted RBP5.89□□□□□ -1.47
C11orf54-212ENST00000533154 RMDN3Q96TC7 470 aa5.89□□□□□ -1.47
C11orf54-212ENST00000533154 RBM28Q9NW13 759 aaKnown RBP5.89□□□□□ -1.47
C11orf54-212ENST00000533154 MAP3K20Q9NYL2 800 aaKnown RBP5.89□□□□□ -1.47
C11orf54-212ENST00000533154 GPRC5DQ9NZD1 345 aa5.89□□□□□ -1.47
C11orf54-212ENST00000533154 CAMSAP3Q9P1Y5 1249 aaPredicted RBP5.89□□□□□ -1.47
C11orf54-212ENST00000533154 CPNE7Q9UBL6 633 aa5.89□□□□□ -1.47
C11orf54-212ENST00000533154 LCMT1Q9UIC8 334 aa5.89□□□□□ -1.47
C11orf54-212ENST00000533154 ZDHHC8Q9ULC8 765 aa5.89□□□□□ -1.47
C11orf54-212ENST00000533154 COL3A1P02461 1466 aaPredicted RBP5.89□□□□□ -1.47
C11orf54-212ENST00000533154 COL11A2P13942 1736 aaPredicted RBP5.88□□□□□ -1.47
C11orf54-212ENST00000533154 FER1L6Q2WGJ9 1857 aa5.88□□□□□ -1.47
C11orf54-212ENST00000533154 DICER1Q9UPY3 1922 aaKnown RBP5.88□□□□□ -1.47
C11orf54-212ENST00000533154 CCDC196A0A1B0GTZ2 297 aa5.88□□□□□ -1.47
C11orf54-212ENST00000533154 TRIM43BA6NCK2 446 aa5.88□□□□□ -1.47
C11orf54-212ENST00000533154 CLCA1A8K7I4 914 aa5.88□□□□□ -1.47
C11orf54-212ENST00000533154 H0Y858 1186 aa5.88□□□□□ -1.47
C11orf54-212ENST00000533154 K7ESM1 405 aa5.88□□□□□ -1.47
C11orf54-212ENST00000533154 F2RL2O00254 374 aa5.88□□□□□ -1.47
C11orf54-212ENST00000533154 HNRNPDLO14979 420 aaKnown RBP5.88□□□□□ -1.47
C11orf54-212ENST00000533154 TEX33O43247 280 aa5.88□□□□□ -1.47
C11orf54-212ENST00000533154 DAPK3O43293 454 aa5.88□□□□□ -1.47
C11orf54-212ENST00000533154 ADCY6O43306 1168 aa5.88□□□□□ -1.47
C11orf54-212ENST00000533154 MTSS1O43312 755 aa5.88□□□□□ -1.47
C11orf54-212ENST00000533154 EPB41L2O43491 1005 aaKnown RBP5.88□□□□□ -1.47
C11orf54-212ENST00000533154 PRICKLE3O43900 615 aaPredicted RBP5.88□□□□□ -1.47
C11orf54-212ENST00000533154 KNG1P01042 644 aa5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms