RNA–Protein interactions for RNA: ENST00000533149.1

TRAPPC4-213, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 1,340 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-213ENST00000533149 MAB21L3Q8N8X9 362 aa12.11□□□□□ -0.47
TRAPPC4-213ENST00000533149 SCFD1Q8WVM8 642 aa12.11□□□□□ -0.47
TRAPPC4-213ENST00000533149 FNBP1Q96RU3 617 aa12.11□□□□□ -0.47
TRAPPC4-213ENST00000533149 FIZ1Q96SL8 496 aa12.11□□□□□ -0.47
TRAPPC4-213ENST00000533149 SEPT5Q99719 369 aaPredicted RBP12.11□□□□□ -0.47
TRAPPC4-213ENST00000533149 ACO2Q99798 780 aaKnown RBP12.11□□□□□ -0.47
TRAPPC4-213ENST00000533149 LPIN3Q9BQK8 851 aa12.11□□□□□ -0.47
TRAPPC4-213ENST00000533149 TCHPQ9BT92 498 aa12.11□□□□□ -0.47
TRAPPC4-213ENST00000533149 KIFC3Q9BVG8 833 aa12.11□□□□□ -0.47
TRAPPC4-213ENST00000533149 PTPRHQ9HD43 1115 aa12.11□□□□□ -0.47
TRAPPC4-213ENST00000533149 OLFML3Q9NRN5 406 aa12.11□□□□□ -0.47
TRAPPC4-213ENST00000533149 DNAAF2Q9NVR5 837 aaKnown RBP12.11□□□□□ -0.47
TRAPPC4-213ENST00000533149 FANCLQ9NW38 375 aa12.11□□□□□ -0.47
TRAPPC4-213ENST00000533149 DUS2Q9NX74 493 aaKnown RBP12.11□□□□□ -0.47
TRAPPC4-213ENST00000533149 LARSQ9P2J5 1176 aaKnown RBP12.11□□□□□ -0.47
TRAPPC4-213ENST00000533149 MMP17Q9ULZ9 603 aa12.11□□□□□ -0.47
TRAPPC4-213ENST00000533149 NFE2L3Q9Y4A8 694 aa12.11□□□□□ -0.47
TRAPPC4-213ENST00000533149 IGSF10Q6WRI0 2623 aa12.11□□□□□ -0.47
TRAPPC4-213ENST00000533149 LOC400499M0QZD8 3231 aa12.11□□□□□ -0.47
TRAPPC4-213ENST00000533149 PHLPP2Q6ZVD8 1323 aa12.11□□□□□ -0.47
TRAPPC4-213ENST00000533149 ARHGAP33O14559 1287 aa12.11□□□□□ -0.47
TRAPPC4-213ENST00000533149 PRPF6O94906 941 aaKnown RBP12.11□□□□□ -0.47
TRAPPC4-213ENST00000533149 KIF20AO95235 890 aa12.11□□□□□ -0.47
TRAPPC4-213ENST00000533149 GCNT3O95395 438 aa12.11□□□□□ -0.47
TRAPPC4-213ENST00000533149 MAPTP10636 758 aaKnown RBP12.11□□□□□ -0.47
TRAPPC4-213ENST00000533149 PLA2G2AP14555 144 aa12.11□□□□□ -0.47
TRAPPC4-213ENST00000533149 TYMPP19971 482 aa12.11□□□□□ -0.47
TRAPPC4-213ENST00000533149 ITPKAP23677 461 aa12.11□□□□□ -0.47
TRAPPC4-213ENST00000533149 AARSP49588 968 aaKnown RBP eCLIP12.11□□□□□ -0.47
TRAPPC4-213ENST00000533149 CASP5P51878 434 aa12.11□□□□□ -0.47
TRAPPC4-213ENST00000533149 PMS1P54277 932 aaKnown RBP12.11□□□□□ -0.47
TRAPPC4-213ENST00000533149 PEX3P56589 373 aa12.11□□□□□ -0.47
TRAPPC4-213ENST00000533149 CACNA1EQ15878 2313 aa12.11□□□□□ -0.47
TRAPPC4-213ENST00000533149 MGAT5BQ3V5L5 792 aa12.11□□□□□ -0.47
TRAPPC4-213ENST00000533149 ANKRD40Q6AI12 368 aa12.11□□□□□ -0.47
TRAPPC4-213ENST00000533149 DSTYKQ6XUX3 929 aa12.11□□□□□ -0.47
TRAPPC4-213ENST00000533149 ZNF605Q86T29 641 aa12.11□□□□□ -0.47
TRAPPC4-213ENST00000533149 NELFCDQ8IXH7 590 aa12.11□□□□□ -0.47
TRAPPC4-213ENST00000533149 TTC9BQ8N6N2 239 aa12.11□□□□□ -0.47
TRAPPC4-213ENST00000533149 ZNF507Q8TCN5 953 aa12.11□□□□□ -0.47
TRAPPC4-213ENST00000533149 OSCP1Q8WVF1 389 aa12.11□□□□□ -0.47
TRAPPC4-213ENST00000533149 RLN3Q8WXF3 142 aa12.11□□□□□ -0.47
TRAPPC4-213ENST00000533149 SLC39A7Q92504 469 aa12.11□□□□□ -0.47
TRAPPC4-213ENST00000533149 DUSP9Q99956 384 aaKnown RBP12.11□□□□□ -0.47
TRAPPC4-213ENST00000533149 MRPL4Q9BYD3 311 aaKnown RBP12.11□□□□□ -0.47
TRAPPC4-213ENST00000533149 CAPN10Q9HC96 672 aa12.11□□□□□ -0.47
TRAPPC4-213ENST00000533149 HELZ2Q9BYK8 2649 aaKnown RBP12.1□□□□□ -0.47
TRAPPC4-213ENST00000533149 A0A087WV48 116 aa12.1□□□□□ -0.47
TRAPPC4-213ENST00000533149 BICDL2A1A5D9 508 aa12.1□□□□□ -0.47
TRAPPC4-213ENST00000533149 TRIM49BA6NDI0 452 aa12.1□□□□□ -0.47
TRAPPC4-213ENST00000533149 CCDC169A6NNP5 214 aa12.1□□□□□ -0.47
TRAPPC4-213ENST00000533149 AP5Z1O43299 807 aa12.1□□□□□ -0.47
TRAPPC4-213ENST00000533149 PRB1P04280 392 aa12.1□□□□□ -0.47
TRAPPC4-213ENST00000533149 ATF6P18850 670 aa12.1□□□□□ -0.47
TRAPPC4-213ENST00000533149 LRPAP1P30533 357 aa12.1□□□□□ -0.47
TRAPPC4-213ENST00000533149 HOXD13P35453 343 aa12.1□□□□□ -0.47
TRAPPC4-213ENST00000533149 IFNAR2P48551 515 aa12.1□□□□□ -0.47
TRAPPC4-213ENST00000533149 MRPS21P82921 87 aaKnown RBP12.1□□□□□ -0.47
TRAPPC4-213ENST00000533149 MTF1Q14872 753 aa12.1□□□□□ -0.47
TRAPPC4-213ENST00000533149 TPD52L1Q16890 204 aaPredicted RBP12.1□□□□□ -0.47
TRAPPC4-213ENST00000533149 ZC2HC1CQ53FD0 456 aaPredicted RBP12.1□□□□□ -0.47
TRAPPC4-213ENST00000533149 TTI2Q6NXR4 508 aa12.1□□□□□ -0.47
TRAPPC4-213ENST00000533149 STXBP4Q6ZWJ1 553 aa12.1□□□□□ -0.47
TRAPPC4-213ENST00000533149 MON1AQ86VX9 555 aa12.1□□□□□ -0.47
TRAPPC4-213ENST00000533149 SCUBE3Q8IX30 993 aa12.1□□□□□ -0.47
TRAPPC4-213ENST00000533149 CCDC33Q8N5R6 958 aa12.1□□□□□ -0.47
TRAPPC4-213ENST00000533149 PNPLA1Q8N8W4 532 aa12.1□□□□□ -0.47
TRAPPC4-213ENST00000533149 C2orf15Q8WU43 125 aaKnown RBP12.1□□□□□ -0.47
TRAPPC4-213ENST00000533149 SPIRE2Q8WWL2 714 aa12.1□□□□□ -0.47
TRAPPC4-213ENST00000533149 MRPS31Q92665 395 aaKnown RBP12.1□□□□□ -0.47
TRAPPC4-213ENST00000533149 NTPCRQ9BSD7 190 aaKnown RBP12.1□□□□□ -0.47
TRAPPC4-213ENST00000533149 STRA6Q9BX79 667 aa12.1□□□□□ -0.47
TRAPPC4-213ENST00000533149 HSD3B7Q9H2F3 369 aa12.1□□□□□ -0.47
TRAPPC4-213ENST00000533149 C17orf75Q9HAS0 396 aa12.1□□□□□ -0.47
TRAPPC4-213ENST00000533149 POLMQ9NP87 494 aaPredicted RBP12.1□□□□□ -0.47
TRAPPC4-213ENST00000533149 SAMSN1Q9NSI8 373 aaKnown RBP12.1□□□□□ -0.47
TRAPPC4-213ENST00000533149 BCCIPQ9P287 314 aaKnown RBP eCLIP12.1□□□□□ -0.47
TRAPPC4-213ENST00000533149 TUBGCP4Q9UGJ1 667 aa12.1□□□□□ -0.47
TRAPPC4-213ENST00000533149 PCDHB13Q9Y5F0 798 aa12.1□□□□□ -0.47
TRAPPC4-213ENST00000533149 FREM2Q5SZK8 3169 aa12.1□□□□□ -0.47
TRAPPC4-213ENST00000533149 ATXN2Q99700 1313 aaKnown RBP12.09□□□□□ -0.47
TRAPPC4-213ENST00000533149 K7EQS6 105 aa12.09□□□□□ -0.47
TRAPPC4-213ENST00000533149 EIF3DO15371 548 aaKnown RBP eCLIP12.09□□□□□ -0.47
TRAPPC4-213ENST00000533149 SLC16A4O15374 487 aa12.09□□□□□ -0.47
TRAPPC4-213ENST00000533149 SH3BP5O60239 455 aa12.09□□□□□ -0.47
TRAPPC4-213ENST00000533149 PAX3P23760 479 aa12.09□□□□□ -0.47
TRAPPC4-213ENST00000533149 NPTX2P47972 431 aa12.09□□□□□ -0.47
TRAPPC4-213ENST00000533149 SMTNP53814 917 aa12.09□□□□□ -0.47
TRAPPC4-213ENST00000533149 SEC13P55735 322 aa12.09□□□□□ -0.47
TRAPPC4-213ENST00000533149 SMARCB1Q12824 385 aa12.09□□□□□ -0.47
TRAPPC4-213ENST00000533149 KNOP1Q1ED39 458 aaKnown RBP12.09□□□□□ -0.47
TRAPPC4-213ENST00000533149 BMT2Q1RMZ1 405 aa12.09□□□□□ -0.47
TRAPPC4-213ENST00000533149 SLC10A6Q3KNW5 377 aa12.09□□□□□ -0.47
TRAPPC4-213ENST00000533149 MAP7D1Q3KQU3 841 aa12.09□□□□□ -0.47
TRAPPC4-213ENST00000533149 HSF5Q4G112 596 aaPredicted RBP12.09□□□□□ -0.47
TRAPPC4-213ENST00000533149 TXNDC8Q6A555 127 aa12.09□□□□□ -0.47
TRAPPC4-213ENST00000533149 MPZL3Q6UWV2 235 aa12.09□□□□□ -0.47
TRAPPC4-213ENST00000533149 TOGARAM2Q6ZUX3 1019 aa12.09□□□□□ -0.47
TRAPPC4-213ENST00000533149 TMEM150AQ86TG1 271 aa12.09□□□□□ -0.47
TRAPPC4-213ENST00000533149 LSM14AQ8ND56 463 aaKnown RBP12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 56.5 ms