RNA–Protein interactions for RNA: ENST00000533012.1

TRAPPC4-211, Transcript of trafficking protein particle complex 4, humanhuman

TSL 2

Gene TRAPPC4, Length 817 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-211ENST00000533012 STK32AQ8WU08 396 aa11.86□□□□□ -0.51
TRAPPC4-211ENST00000533012 KCTD13Q8WZ19 329 aa11.86□□□□□ -0.51
TRAPPC4-211ENST00000533012 DDX1Q92499 740 aaKnown RBP11.86□□□□□ -0.51
TRAPPC4-211ENST00000533012 SYN2Q92777 582 aaPredicted RBP11.86□□□□□ -0.51
TRAPPC4-211ENST00000533012 TRIM44Q96DX7 344 aaPredicted RBP11.86□□□□□ -0.51
TRAPPC4-211ENST00000533012 HSFY1Q96LI6 401 aa11.86□□□□□ -0.51
TRAPPC4-211ENST00000533012 NOX5Q96PH1 765 aa11.86□□□□□ -0.51
TRAPPC4-211ENST00000533012 SLITRK1Q96PX8 696 aa11.86□□□□□ -0.51
TRAPPC4-211ENST00000533012 GCNAQ96QF7 691 aa11.86□□□□□ -0.51
TRAPPC4-211ENST00000533012 TTLL2Q9BWV7 592 aa11.86□□□□□ -0.51
TRAPPC4-211ENST00000533012 LRRC3Q9BY71 257 aa11.86□□□□□ -0.51
TRAPPC4-211ENST00000533012 ATXN3LQ9H3M9 355 aa11.86□□□□□ -0.51
TRAPPC4-211ENST00000533012 POMKQ9H5K3 350 aa11.86□□□□□ -0.51
TRAPPC4-211ENST00000533012 LRRC4Q9HBW1 653 aa11.86□□□□□ -0.51
TRAPPC4-211ENST00000533012 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.86□□□□□ -0.51
TRAPPC4-211ENST00000533012 IL37Q9NZH6 218 aa11.86□□□□□ -0.51
TRAPPC4-211ENST00000533012 ATG2AQ2TAZ0 1938 aa11.86□□□□□ -0.51
TRAPPC4-211ENST00000533012 CLUHO75153 1309 aa11.86□□□□□ -0.51
TRAPPC4-211ENST00000533012 TULP2O00295 520 aa11.85□□□□□ -0.51
TRAPPC4-211ENST00000533012 ADCY5O95622 1261 aa11.85□□□□□ -0.51
TRAPPC4-211ENST00000533012 F11P03951 625 aa11.85□□□□□ -0.51
TRAPPC4-211ENST00000533012 MMEP08473 750 aa11.85□□□□□ -0.51
TRAPPC4-211ENST00000533012 CFHP08603 1231 aa11.85□□□□□ -0.51
TRAPPC4-211ENST00000533012 CDC25CP30307 473 aa11.85□□□□□ -0.51
TRAPPC4-211ENST00000533012 PPP3CCP48454 512 aa11.85□□□□□ -0.51
TRAPPC4-211ENST00000533012 TKTL1P51854 596 aa11.85□□□□□ -0.51
TRAPPC4-211ENST00000533012 KIF11P52732 1056 aa11.85□□□□□ -0.51
TRAPPC4-211ENST00000533012 SNX16P57768 344 aa11.85□□□□□ -0.51
TRAPPC4-211ENST00000533012 USP46P62068 366 aa11.85□□□□□ -0.51
TRAPPC4-211ENST00000533012 TAF10Q12962 218 aa11.85□□□□□ -0.51
TRAPPC4-211ENST00000533012 PRSS36Q5K4E3 855 aa11.85□□□□□ -0.51
TRAPPC4-211ENST00000533012 PMF1Q6P1K2 205 aa11.85□□□□□ -0.51
TRAPPC4-211ENST00000533012 OTOP3Q7RTS5 596 aa11.85□□□□□ -0.51
TRAPPC4-211ENST00000533012 TMC8Q8IU68 726 aa11.85□□□□□ -0.51
TRAPPC4-211ENST00000533012 GPIHBP1Q8IV16 184 aa11.85□□□□□ -0.51
TRAPPC4-211ENST00000533012 PASD1Q8IV76 773 aa11.85□□□□□ -0.51
TRAPPC4-211ENST00000533012 DRC7Q8IY82 874 aa11.85□□□□□ -0.51
TRAPPC4-211ENST00000533012 TMEM35BQ8NCS4 154 aa11.85□□□□□ -0.51
TRAPPC4-211ENST00000533012 PDZD8Q8NEN9 1154 aa11.85□□□□□ -0.51
TRAPPC4-211ENST00000533012 SCAMP5Q8TAC9 235 aa11.85□□□□□ -0.51
TRAPPC4-211ENST00000533012 FBXO32Q969P5 355 aa11.85□□□□□ -0.51
TRAPPC4-211ENST00000533012 ASB2Q96Q27 587 aa11.85□□□□□ -0.51
TRAPPC4-211ENST00000533012 AGPAT1Q99943 283 aa11.85□□□□□ -0.51
TRAPPC4-211ENST00000533012 PHF7Q9BWX1 381 aaPredicted RBP11.85□□□□□ -0.51
TRAPPC4-211ENST00000533012 ZNF334Q9HCZ1 680 aaPredicted RBP11.85□□□□□ -0.51
TRAPPC4-211ENST00000533012 ST7Q9NRC1 585 aa11.85□□□□□ -0.51
TRAPPC4-211ENST00000533012 TRPM5Q9NZQ8 1165 aa11.85□□□□□ -0.51
TRAPPC4-211ENST00000533012 CHORDC1Q9UHD1 332 aaPredicted RBP11.85□□□□□ -0.51
TRAPPC4-211ENST00000533012 NOCTQ9UK39 431 aaKnown RBP11.85□□□□□ -0.51
TRAPPC4-211ENST00000533012 BZW2Q9Y6E2 419 aaKnown RBP11.85□□□□□ -0.51
TRAPPC4-211ENST00000533012 PLXNA3P51805 1871 aa11.85□□□□□ -0.51
TRAPPC4-211ENST00000533012 A0A1W2PRU2 124 aa11.84□□□□□ -0.51
TRAPPC4-211ENST00000533012 FAM92AA1XBS5 289 aa11.84□□□□□ -0.51
TRAPPC4-211ENST00000533012 ABL1P00519 1130 aa11.84□□□□□ -0.51
TRAPPC4-211ENST00000533012 IL9P15248 144 aa11.84□□□□□ -0.51
TRAPPC4-211ENST00000533012 TNFAIP3P21580 790 aa11.84□□□□□ -0.51
TRAPPC4-211ENST00000533012 CCR2P41597 374 aa11.84□□□□□ -0.51
TRAPPC4-211ENST00000533012 PRKCIP41743 596 aa11.84□□□□□ -0.51
TRAPPC4-211ENST00000533012 ACADSBP45954 432 aa11.84□□□□□ -0.51
TRAPPC4-211ENST00000533012 RGS7P49802 495 aa11.84□□□□□ -0.51
TRAPPC4-211ENST00000533012 KCNQ1P51787 676 aa11.84□□□□□ -0.51
TRAPPC4-211ENST00000533012 KLHL30Q0D2K2 578 aa11.84□□□□□ -0.51
TRAPPC4-211ENST00000533012 ARHGAP15Q53QZ3 475 aa11.84□□□□□ -0.51
TRAPPC4-211ENST00000533012 RAB41Q5JT25 222 aa11.84□□□□□ -0.51
TRAPPC4-211ENST00000533012 TRIM72Q6ZMU5 477 aa11.84□□□□□ -0.51
TRAPPC4-211ENST00000533012 GAREM2Q75VX8 874 aa11.84□□□□□ -0.51
TRAPPC4-211ENST00000533012 GET4Q7L5D6 327 aaPredicted RBP11.84□□□□□ -0.51
TRAPPC4-211ENST00000533012 MON1AQ86VX9 555 aa11.84□□□□□ -0.51
TRAPPC4-211ENST00000533012 SIX6OS1Q8N1H7 587 aa11.84□□□□□ -0.51
TRAPPC4-211ENST00000533012 WDTC1Q8N5D0 677 aa11.84□□□□□ -0.51
TRAPPC4-211ENST00000533012 OR8K1Q8NGG5 319 aa11.84□□□□□ -0.51
TRAPPC4-211ENST00000533012 ITFG1Q8TB96 612 aa11.84□□□□□ -0.51
TRAPPC4-211ENST00000533012 SLC20A1Q8WUM9 679 aa11.84□□□□□ -0.51
TRAPPC4-211ENST00000533012 OVCA2Q8WZ82 227 aa11.84□□□□□ -0.51
TRAPPC4-211ENST00000533012 MRPS31Q92665 395 aaKnown RBP11.84□□□□□ -0.51
TRAPPC4-211ENST00000533012 ACSF2Q96CM8 615 aaPredicted RBP11.84□□□□□ -0.51
TRAPPC4-211ENST00000533012 TCEAL4Q96EI5 215 aa11.84□□□□□ -0.51
TRAPPC4-211ENST00000533012 HAUS4Q9H6D7 363 aa11.84□□□□□ -0.51
TRAPPC4-211ENST00000533012 IL21Q9HBE4 155 aa11.84□□□□□ -0.51
TRAPPC4-211ENST00000533012 CYLDQ9NQC7 956 aa11.84□□□□□ -0.51
TRAPPC4-211ENST00000533012 SEPT11Q9NVA2 429 aaKnown RBP11.84□□□□□ -0.51
TRAPPC4-211ENST00000533012 ZNHIT6Q9NWK9 470 aaKnown RBP11.84□□□□□ -0.51
TRAPPC4-211ENST00000533012 ZMYM5Q9UJ78 669 aa11.84□□□□□ -0.51
TRAPPC4-211ENST00000533012 SCML2Q9UQR0 700 aa11.84□□□□□ -0.51
TRAPPC4-211ENST00000533012 USTQ9Y2C2 406 aa11.84□□□□□ -0.51
TRAPPC4-211ENST00000533012 NR2E1Q9Y466 385 aa11.84□□□□□ -0.51
TRAPPC4-211ENST00000533012 USP3Q9Y6I4 520 aa11.84□□□□□ -0.51
TRAPPC4-211ENST00000533012 ZFP37Q9Y6Q3 630 aaPredicted RBP11.84□□□□□ -0.51
TRAPPC4-211ENST00000533012 COL6A3P12111 3177 aa11.83□□□□□ -0.51
TRAPPC4-211ENST00000533012 ZNF840PA6NDX5 716 aa11.83□□□□□ -0.52
TRAPPC4-211ENST00000533012 SOBPA7XYQ1 873 aa11.83□□□□□ -0.52
TRAPPC4-211ENST00000533012 AKR1B15C9JRZ8 316 aaPredicted RBP11.83□□□□□ -0.52
TRAPPC4-211ENST00000533012 LSM8O95777 96 aaKnown RBP11.83□□□□□ -0.52
TRAPPC4-211ENST00000533012 ZBED1O96006 694 aa11.83□□□□□ -0.52
TRAPPC4-211ENST00000533012 USP17L7P0C7H9 530 aa11.83□□□□□ -0.52
TRAPPC4-211ENST00000533012 SKILP12757 684 aa11.83□□□□□ -0.52
TRAPPC4-211ENST00000533012 BMP1P13497 986 aa11.83□□□□□ -0.52
TRAPPC4-211ENST00000533012 LCP1P13796 627 aa11.83□□□□□ -0.52
TRAPPC4-211ENST00000533012 GJA1P17302 382 aa11.83□□□□□ -0.52
TRAPPC4-211ENST00000533012 CHRNB2P17787 502 aa11.83□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms