RNA–Protein interactions for RNA: ENST00000532285.1

CAPN1-222, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-222ENST00000532285 ARL14EPQ8N8R7 260 aaPredicted RBP24.35■■□□□ 1.49
CAPN1-222ENST00000532285 PDZD8Q8NEN9 1154 aa24.35■■□□□ 1.49
CAPN1-222ENST00000532285 OVCA2Q8WZ82 227 aa24.35■■□□□ 1.49
CAPN1-222ENST00000532285 C8orf33Q9H7E9 229 aaPredicted RBP24.35■■□□□ 1.49
CAPN1-222ENST00000532285 LMBRD1Q9NUN5 540 aa24.35■■□□□ 1.49
CAPN1-222ENST00000532285 RWDD2AQ9UIY3 292 aa24.35■■□□□ 1.49
CAPN1-222ENST00000532285 F5P12259 2224 aa24.35■■□□□ 1.49
CAPN1-222ENST00000532285 MYO16Q9Y6X6 1858 aa24.34■■□□□ 1.49
CAPN1-222ENST00000532285 SHISA7A6NL88 538 aa24.34■■□□□ 1.49
CAPN1-222ENST00000532285 H0Y858 1186 aa24.34■■□□□ 1.49
CAPN1-222ENST00000532285 ADORA2BP29275 332 aa24.34■■□□□ 1.49
CAPN1-222ENST00000532285 KPNA1P52294 538 aaPredicted RBP24.34■■□□□ 1.49
CAPN1-222ENST00000532285 SLC5A3P53794 718 aa24.34■■□□□ 1.49
CAPN1-222ENST00000532285 MARSP56192 900 aaKnown RBP24.34■■□□□ 1.49
CAPN1-222ENST00000532285 MAP3K7CLP57077 242 aa24.34■■□□□ 1.49
CAPN1-222ENST00000532285 CETN1Q12798 172 aa24.34■■□□□ 1.49
CAPN1-222ENST00000532285 IFRD2Q12894 506 aaPredicted RBP24.34■■□□□ 1.49
CAPN1-222ENST00000532285 ZNF394Q53GI3 561 aa24.34■■□□□ 1.49
CAPN1-222ENST00000532285 CC2D1AQ6P1N0 951 aaPredicted RBP24.34■■□□□ 1.49
CAPN1-222ENST00000532285 C1orf228Q6PIY5 440 aa24.34■■□□□ 1.49
CAPN1-222ENST00000532285 MLKLQ8NB16 471 aa24.34■■□□□ 1.49
CAPN1-222ENST00000532285 ZMIZ2Q8NF64 920 aa24.34■■□□□ 1.49
CAPN1-222ENST00000532285 FBXO32Q969P5 355 aa24.34■■□□□ 1.49
CAPN1-222ENST00000532285 IPO9Q96P70 1041 aaKnown RBP24.34■■□□□ 1.49
CAPN1-222ENST00000532285 GBP4Q96PP9 640 aa24.34■■□□□ 1.49
CAPN1-222ENST00000532285 GKN1Q9NS71 199 aa24.34■■□□□ 1.49
CAPN1-222ENST00000532285 IL37Q9NZH6 218 aa24.34■■□□□ 1.49
CAPN1-222ENST00000532285 P4HA2O15460 535 aa24.33■■□□□ 1.49
CAPN1-222ENST00000532285 BEST1O76090 585 aa24.33■■□□□ 1.49
CAPN1-222ENST00000532285 TARSP26639 723 aaKnown RBP24.33■■□□□ 1.49
CAPN1-222ENST00000532285 MAGEA9P43362 315 aa24.33■■□□□ 1.49
CAPN1-222ENST00000532285 YWHAEP62258 255 aaKnown RBP24.33■■□□□ 1.49
CAPN1-222ENST00000532285 CUL2Q13617 745 aa24.33■■□□□ 1.49
CAPN1-222ENST00000532285 TRIM59Q8IWR1 403 aa24.33■■□□□ 1.49
CAPN1-222ENST00000532285 SCAMP5Q8TAC9 235 aa24.33■■□□□ 1.49
CAPN1-222ENST00000532285 FAM3CQ92520 227 aa24.33■■□□□ 1.49
CAPN1-222ENST00000532285 TMEM176AQ96HP8 235 aa24.33■■□□□ 1.49
CAPN1-222ENST00000532285 HEXIM2Q96MH2 286 aaKnown RBP24.33■■□□□ 1.49
CAPN1-222ENST00000532285 ARID3AQ99856 593 aa24.33■■□□□ 1.49
CAPN1-222ENST00000532285 FAM83CQ9BQN1 747 aa24.33■■□□□ 1.49
CAPN1-222ENST00000532285 NUP62CLQ9H1M0 184 aa24.33■■□□□ 1.49
CAPN1-222ENST00000532285 GTSE1Q9NYZ3 720 aa24.33■■□□□ 1.49
CAPN1-222ENST00000532285 ABL1P00519 1130 aa24.32■■□□□ 1.48
CAPN1-222ENST00000532285 CCDC192P0DO97 292 aa24.32■■□□□ 1.48
CAPN1-222ENST00000532285 ATOH1Q92858 354 aaPredicted RBP24.32■■□□□ 1.48
CAPN1-222ENST00000532285 CLDN23Q96B33 292 aa24.32■■□□□ 1.48
CAPN1-222ENST00000532285 FBXO44Q9H4M3 255 aa24.32■■□□□ 1.48
CAPN1-222ENST00000532285 ARHGAP26Q9UNA1 814 aa24.32■■□□□ 1.48
CAPN1-222ENST00000532285 CACNA1HO95180 2353 aa24.31■■□□□ 1.48
CAPN1-222ENST00000532285 FAM92AA1XBS5 289 aa24.31■■□□□ 1.48
CAPN1-222ENST00000532285 TCF3P15923 654 aa24.31■■□□□ 1.48
CAPN1-222ENST00000532285 TBXAS1P24557 533 aaPredicted RBP24.31■■□□□ 1.48
CAPN1-222ENST00000532285 RPS9P46781 194 aaKnown RBP24.31■■□□□ 1.48
CAPN1-222ENST00000532285 RAD23BP54727 409 aa24.31■■□□□ 1.48
CAPN1-222ENST00000532285 TNK2Q07912 1038 aa24.31■■□□□ 1.48
CAPN1-222ENST00000532285 KCNH2Q12809 1159 aa24.31■■□□□ 1.48
CAPN1-222ENST00000532285 ANGPT1Q15389 498 aa24.31■■□□□ 1.48
CAPN1-222ENST00000532285 ZNF77Q15935 545 aa24.31■■□□□ 1.48
CAPN1-222ENST00000532285 ITPRIPL2Q3MIP1 535 aa24.31■■□□□ 1.48
CAPN1-222ENST00000532285 PPP1R26Q5T8A7 1209 aaPredicted RBP24.31■■□□□ 1.48
CAPN1-222ENST00000532285 CLEC20AQ6ZU45 233 aa24.31■■□□□ 1.48
CAPN1-222ENST00000532285 RALGPS2Q86X27 583 aaPredicted RBP24.31■■□□□ 1.48
CAPN1-222ENST00000532285 SLC4A11Q8NBS3 891 aa24.31■■□□□ 1.48
CAPN1-222ENST00000532285 PNPLA8Q9NP80 782 aa24.31■■□□□ 1.48
CAPN1-222ENST00000532285 NDRG2Q9UN36 371 aaKnown RBP24.31■■□□□ 1.48
CAPN1-222ENST00000532285 UTP18Q9Y5J1 556 aaKnown RBP eCLIP24.31■■□□□ 1.48
CAPN1-222ENST00000532285 SPECC1L-ADORA2AF8WAN1 911 aa24.3■■□□□ 1.48
CAPN1-222ENST00000532285 OAS1P00973 400 aaKnown RBP24.3■■□□□ 1.48
CAPN1-222ENST00000532285 SLC7A9P82251 487 aa24.3■■□□□ 1.48
CAPN1-222ENST00000532285 LRMPQ12912 555 aa24.3■■□□□ 1.48
CAPN1-222ENST00000532285 USP4Q13107 963 aa24.3■■□□□ 1.48
CAPN1-222ENST00000532285 MTF1Q14872 753 aa24.3■■□□□ 1.48
CAPN1-222ENST00000532285 PDGFRLQ15198 375 aa24.3■■□□□ 1.48
CAPN1-222ENST00000532285 SNX30Q5VWJ9 437 aa24.3■■□□□ 1.48
CAPN1-222ENST00000532285 ZNF687Q8N1G0 1237 aa24.3■■□□□ 1.48
CAPN1-222ENST00000532285 TTC8Q8TAM2 541 aa24.3■■□□□ 1.48
CAPN1-222ENST00000532285 RIN3Q8TB24 985 aa24.3■■□□□ 1.48
CAPN1-222ENST00000532285 SH3RF2Q8TEC5 729 aa24.3■■□□□ 1.48
CAPN1-222ENST00000532285 NT5C1BQ96P26 610 aa24.3■■□□□ 1.48
CAPN1-222ENST00000532285 DUSP16Q9BY84 665 aa24.3■■□□□ 1.48
CAPN1-222ENST00000532285 RNF38Q9H0F5 515 aa24.3■■□□□ 1.48
CAPN1-222ENST00000532285 CHORDC1Q9UHD1 332 aaPredicted RBP24.3■■□□□ 1.48
CAPN1-222ENST00000532285 CACNA1IQ9P0X4 2223 aa24.3■■□□□ 1.48
CAPN1-222ENST00000532285 OLFM2O95897 454 aa24.29■■□□□ 1.48
CAPN1-222ENST00000532285 AFPP02771 609 aaKnown RBP24.29■■□□□ 1.48
CAPN1-222ENST00000532285 CTHP32929 405 aa24.29■■□□□ 1.48
CAPN1-222ENST00000532285 SOX9P48436 509 aa24.29■■□□□ 1.48
CAPN1-222ENST00000532285 FZD5Q13467 585 aa24.29■■□□□ 1.48
CAPN1-222ENST00000532285 RUNX3Q13761 415 aa24.29■■□□□ 1.48
CAPN1-222ENST00000532285 C1orf210Q8IVY1 113 aa24.29■■□□□ 1.48
CAPN1-222ENST00000532285 TTC16Q8NEE8 873 aa24.29■■□□□ 1.48
CAPN1-222ENST00000532285 OSCP1Q8WVF1 389 aa24.29■■□□□ 1.48
CAPN1-222ENST00000532285 EBF3Q9H4W6 596 aa24.29■■□□□ 1.48
CAPN1-222ENST00000532285 HHLA1C9JL84 531 aa24.28■■□□□ 1.48
CAPN1-222ENST00000532285 ZDHHC11BP0C7U3 371 aa24.28■■□□□ 1.48
CAPN1-222ENST00000532285 HECTD3Q5T447 861 aa24.28■■□□□ 1.48
CAPN1-222ENST00000532285 TRIM68Q6AZZ1 485 aa24.28■■□□□ 1.48
CAPN1-222ENST00000532285 EHBP1Q8NDI1 1231 aa24.28■■□□□ 1.48
CAPN1-222ENST00000532285 LMO3Q8TAP4 145 aa24.28■■□□□ 1.48
CAPN1-222ENST00000532285 MED15Q96RN5 788 aa24.28■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms