RNA–Protein interactions for RNA: ENST00000531842.1

USF1-210, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 720 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-210ENST00000531842 FAM221BA6H8Z2 402 aa9.6□□□□□ -0.87
USF1-210ENST00000531842 OPHN1O60890 802 aa9.6□□□□□ -0.87
USF1-210ENST00000531842 ALDH1A2O94788 518 aa9.6□□□□□ -0.87
USF1-210ENST00000531842 KRT19P08727 400 aa9.6□□□□□ -0.87
USF1-210ENST00000531842 PDGFRBP09619 1106 aa9.6□□□□□ -0.87
USF1-210ENST00000531842 ATXN3P54252 364 aaPredicted RBP9.6□□□□□ -0.87
USF1-210ENST00000531842 MRPS21P82921 87 aaKnown RBP9.6□□□□□ -0.87
USF1-210ENST00000531842 GFPT1Q06210 699 aaPredicted RBP9.6□□□□□ -0.87
USF1-210ENST00000531842 RESTQ13127 1097 aa9.6□□□□□ -0.87
USF1-210ENST00000531842 TRIP6Q15654 476 aaKnown RBP9.6□□□□□ -0.87
USF1-210ENST00000531842 SOWAHAQ2M3V2 549 aa9.6□□□□□ -0.87
USF1-210ENST00000531842 LY6G5CQ5SRR4 150 aa9.6□□□□□ -0.87
USF1-210ENST00000531842 CD302Q8IX05 232 aa9.6□□□□□ -0.87
USF1-210ENST00000531842 HDDC3Q8N4P3 179 aa9.6□□□□□ -0.87
USF1-210ENST00000531842 POMGNT1Q8WZA1 660 aa9.6□□□□□ -0.87
USF1-210ENST00000531842 CDK5RAP3Q96JB5 506 aa9.6□□□□□ -0.87
USF1-210ENST00000531842 SPACA7Q96KW9 195 aa9.6□□□□□ -0.87
USF1-210ENST00000531842 HSPA12BQ96MM6 686 aa9.6□□□□□ -0.87
USF1-210ENST00000531842 PNKPQ96T60 521 aa9.6□□□□□ -0.87
USF1-210ENST00000531842 ACBD6Q9BR61 282 aa9.6□□□□□ -0.87
USF1-210ENST00000531842 FAM213AQ9BRX8 229 aa9.6□□□□□ -0.87
USF1-210ENST00000531842 ASB7Q9H672 318 aa9.6□□□□□ -0.87
USF1-210ENST00000531842 ARHGEF4Q9NR80 690 aa9.6□□□□□ -0.87
USF1-210ENST00000531842 UXTQ9UBK9 157 aaPredicted RBP9.6□□□□□ -0.87
USF1-210ENST00000531842 SIX4Q9UIU6 781 aa9.6□□□□□ -0.87
USF1-210ENST00000531842 SLC6A14Q9UN76 642 aa9.6□□□□□ -0.87
USF1-210ENST00000531842 DERAQ9Y315 318 aa9.6□□□□□ -0.87
USF1-210ENST00000531842 C2CD2Q9Y426 696 aa9.6□□□□□ -0.87
USF1-210ENST00000531842 SNX9Q9Y5X1 595 aa9.6□□□□□ -0.87
USF1-210ENST00000531842 RAD54BQ9Y620 910 aa9.6□□□□□ -0.87
USF1-210ENST00000531842 MYLKQ15746 1914 aa9.59□□□□□ -0.87
USF1-210ENST00000531842 IGHV1OR15-9A0A0B4J2B8 117 aa9.59□□□□□ -0.87
USF1-210ENST00000531842 MYMKA6NI61 221 aa9.59□□□□□ -0.87
USF1-210ENST00000531842 GOLGA8CPA6NN73 597 aa9.59□□□□□ -0.87
USF1-210ENST00000531842 ARHGAP33O14559 1287 aa9.59□□□□□ -0.87
USF1-210ENST00000531842 HUS1O60921 280 aa9.59□□□□□ -0.87
USF1-210ENST00000531842 GJB3O75712 270 aa9.59□□□□□ -0.87
USF1-210ENST00000531842 APODP05090 189 aa9.59□□□□□ -0.87
USF1-210ENST00000531842 KRT18P05783 430 aaKnown RBP9.59□□□□□ -0.87
USF1-210ENST00000531842 SERPINF2P08697 491 aa9.59□□□□□ -0.87
USF1-210ENST00000531842 IRF1P10914 325 aa9.59□□□□□ -0.87
USF1-210ENST00000531842 PRPHP41219 470 aa9.59□□□□□ -0.87
USF1-210ENST00000531842 CASP5P51878 434 aa9.59□□□□□ -0.87
USF1-210ENST00000531842 ZNF131P52739 623 aa9.59□□□□□ -0.87
USF1-210ENST00000531842 GTF2BQ00403 316 aa9.59□□□□□ -0.87
USF1-210ENST00000531842 CYP27A1Q02318 531 aa9.59□□□□□ -0.87
USF1-210ENST00000531842 ZNF33AQ06730 810 aa9.59□□□□□ -0.87
USF1-210ENST00000531842 SMARCB1Q12824 385 aa9.59□□□□□ -0.87
USF1-210ENST00000531842 NFE2Q16621 373 aaPredicted RBP9.59□□□□□ -0.87
USF1-210ENST00000531842 DUOXA1Q1HG43 343 aa9.59□□□□□ -0.87
USF1-210ENST00000531842 PEAR1Q5VY43 1037 aaPredicted RBP9.59□□□□□ -0.87
USF1-210ENST00000531842 EGFLAMQ63HQ2 1017 aa9.59□□□□□ -0.87
USF1-210ENST00000531842 MCTP1Q6DN14 999 aa9.59□□□□□ -0.87
USF1-210ENST00000531842 DYMQ7RTS9 669 aa9.59□□□□□ -0.87
USF1-210ENST00000531842 C11orf74Q86VG3 221 aa9.59□□□□□ -0.87
USF1-210ENST00000531842 SFR1Q86XK3 245 aa9.59□□□□□ -0.87
USF1-210ENST00000531842 ADGRF2Q8IZF7 708 aa9.59□□□□□ -0.87
USF1-210ENST00000531842 CSGALNACT2Q8N6G5 542 aa9.59□□□□□ -0.87
USF1-210ENST00000531842 TRIML1Q8N9V2 468 aa9.59□□□□□ -0.87
USF1-210ENST00000531842 SPATA18Q8TC71 538 aa9.59□□□□□ -0.87
USF1-210ENST00000531842 LEO1Q8WVC0 666 aaPredicted RBP9.59□□□□□ -0.87
USF1-210ENST00000531842 KBTBD7Q8WVZ9 684 aa9.59□□□□□ -0.87
USF1-210ENST00000531842 ELMO3Q96BJ8 720 aa9.59□□□□□ -0.87
USF1-210ENST00000531842 MTMR12Q9C0I1 747 aa9.59□□□□□ -0.87
USF1-210ENST00000531842 PCIF1Q9H4Z3 704 aa9.59□□□□□ -0.87
USF1-210ENST00000531842 PARVGQ9HBI0 331 aa9.59□□□□□ -0.87
USF1-210ENST00000531842 PDE11AQ9HCR9 933 aa9.59□□□□□ -0.87
USF1-210ENST00000531842 POLMQ9NP87 494 aaPredicted RBP9.59□□□□□ -0.87
USF1-210ENST00000531842 DAXXQ9UER7 740 aaPredicted RBP9.59□□□□□ -0.87
USF1-210ENST00000531842 ZMYM5Q9UJ78 669 aa9.59□□□□□ -0.87
USF1-210ENST00000531842 ODF2LQ9ULJ1 636 aa9.59□□□□□ -0.87
USF1-210ENST00000531842 SLCO1B1Q9Y6L6 691 aa9.59□□□□□ -0.87
USF1-210ENST00000531842 MUC22E2RYF6 1773 aaPredicted RBP9.58□□□□□ -0.88
USF1-210ENST00000531842 A0A1W2PQF6 199 aa9.58□□□□□ -0.88
USF1-210ENST00000531842 FAM149AA5PLN7 773 aa9.58□□□□□ -0.88
USF1-210ENST00000531842 ZNF840PA6NDX5 716 aa9.58□□□□□ -0.88
USF1-210ENST00000531842 WASH3PC4AMC7 463 aa9.58□□□□□ -0.88
USF1-210ENST00000531842 F8VP50 259 aa9.58□□□□□ -0.88
USF1-210ENST00000531842 CLDN5O00501 218 aa9.58□□□□□ -0.88
USF1-210ENST00000531842 MBL2P11226 248 aaPredicted RBP9.58□□□□□ -0.88
USF1-210ENST00000531842 ADH5P11766 374 aa9.58□□□□□ -0.88
USF1-210ENST00000531842 TCF3P15923 654 aa9.58□□□□□ -0.88
USF1-210ENST00000531842 NDUFV2P19404 249 aa9.58□□□□□ -0.88
USF1-210ENST00000531842 DDIT3P35638 169 aa9.58□□□□□ -0.88
USF1-210ENST00000531842 GRIK1P39086 918 aa9.58□□□□□ -0.88
USF1-210ENST00000531842 PGFP49763 221 aa9.58□□□□□ -0.88
USF1-210ENST00000531842 CLDN6P56747 220 aa9.58□□□□□ -0.88
USF1-210ENST00000531842 MYL7Q01449 175 aa9.58□□□□□ -0.88
USF1-210ENST00000531842 KYAT1Q16773 422 aa9.58□□□□□ -0.88
USF1-210ENST00000531842 MDH1BQ5I0G3 518 aa9.58□□□□□ -0.88
USF1-210ENST00000531842 EOGTQ5NDL2 527 aa9.58□□□□□ -0.88
USF1-210ENST00000531842 C10orf76Q5T2E6 689 aa9.58□□□□□ -0.88
USF1-210ENST00000531842 FAM171BQ6P995 826 aa9.58□□□□□ -0.88
USF1-210ENST00000531842 CCNI2Q6ZMN8 369 aaPredicted RBP9.58□□□□□ -0.88
USF1-210ENST00000531842 USP49Q70CQ1 688 aa9.58□□□□□ -0.88
USF1-210ENST00000531842 TMEM25Q86YD3 366 aa9.58□□□□□ -0.88
USF1-210ENST00000531842 NAXDQ8IW45 347 aa9.58□□□□□ -0.88
USF1-210ENST00000531842 ZNF513Q8N8E2 541 aaPredicted RBP9.58□□□□□ -0.88
USF1-210ENST00000531842 OR5B17Q8NGF7 314 aa9.58□□□□□ -0.88
USF1-210ENST00000531842 ADAM32Q8TC27 787 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms