RNA–Protein interactions for RNA: ENST00000531709.6

NXF1-211, Transcript of nuclear RNA export factor 1, humanhuman

TSL 1 (best) BASIC

Gene NXF1, Length 4,128 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-211ENST00000531709 ANKS1BQ7Z6G8 1248 aa11.81□□□□□ -0.52
NXF1-211ENST00000531709 TTC7BQ86TV6 843 aa11.81□□□□□ -0.52
NXF1-211ENST00000531709 ALYREFQ86V81 257 aaKnown RBP11.81□□□□□ -0.52
NXF1-211ENST00000531709 C7orf43Q8WVR3 580 aa11.81□□□□□ -0.52
NXF1-211ENST00000531709 ITGAVP06756 1048 aa11.81□□□□□ -0.52
NXF1-211ENST00000531709 STIP1P31948 543 aaKnown RBP11.81□□□□□ -0.52
NXF1-211ENST00000531709 CDKN2BP42772 138 aa11.81□□□□□ -0.52
NXF1-211ENST00000531709 NBPF20Q3BBV1 942 aa11.81□□□□□ -0.52
NXF1-211ENST00000531709 GALNTL6Q49A17 601 aa11.81□□□□□ -0.52
NXF1-211ENST00000531709 WASHC2DQ5SRD0 308 aa11.81□□□□□ -0.52
NXF1-211ENST00000531709 MICALL2Q8IY33 904 aa11.81□□□□□ -0.52
NXF1-211ENST00000531709 POU5F2Q8N7G0 328 aa11.81□□□□□ -0.52
NXF1-211ENST00000531709 TTC16Q8NEE8 873 aa11.81□□□□□ -0.52
NXF1-211ENST00000531709 NLRP7Q8WX94 980 aa11.81□□□□□ -0.52
NXF1-211ENST00000531709 OXNAD1Q96HP4 312 aaPredicted RBP11.81□□□□□ -0.52
NXF1-211ENST00000531709 DDX50Q9BQ39 737 aaKnown RBP11.81□□□□□ -0.52
NXF1-211ENST00000531709 PORCNQ9H237 461 aa11.81□□□□□ -0.52
NXF1-211ENST00000531709 SEC23IPQ9Y6Y8 1000 aaKnown RBP11.81□□□□□ -0.52
NXF1-211ENST00000531709 ZNF541Q9H0D2 1346 aa11.81□□□□□ -0.52
NXF1-211ENST00000531709 TCRBV7S3A2A0A539 114 aa11.81□□□□□ -0.52
NXF1-211ENST00000531709 CCDC78A2IDD5 438 aa11.81□□□□□ -0.52
NXF1-211ENST00000531709 C2CD2LO14523 706 aa11.81□□□□□ -0.52
NXF1-211ENST00000531709 PRPF4O43172 522 aaKnown RBP eCLIP11.81□□□□□ -0.524e-7■□□□□ 9.9
NXF1-211ENST00000531709 CLCN3P51790 818 aa11.81□□□□□ -0.52
NXF1-211ENST00000531709 ATXN3P54252 364 aaPredicted RBP11.81□□□□□ -0.52
NXF1-211ENST00000531709 KLF1Q13351 362 aaPredicted RBP11.81□□□□□ -0.52
NXF1-211ENST00000531709 HEATR6Q6AI08 1181 aaKnown RBP11.81□□□□□ -0.52
NXF1-211ENST00000531709 SLC26A11Q86WA9 606 aa11.81□□□□□ -0.52
NXF1-211ENST00000531709 DDX55Q8NHQ9 600 aaKnown RBP eCLIP11.81□□□□□ -0.525e-8■□□□□ 10.3
NXF1-211ENST00000531709 RXFP2Q8WXD0 754 aa11.81□□□□□ -0.52
NXF1-211ENST00000531709 SEPT1Q8WYJ6 367 aa11.81□□□□□ -0.52
NXF1-211ENST00000531709 TFAP2BQ92481 460 aa11.81□□□□□ -0.52
NXF1-211ENST00000531709 CLMNQ96JQ2 1002 aa11.81□□□□□ -0.52
NXF1-211ENST00000531709 AGAP3Q96P47 875 aa11.81□□□□□ -0.52
NXF1-211ENST00000531709 ACSS3Q9H6R3 686 aa11.81□□□□□ -0.52
NXF1-211ENST00000531709 ARHGAP28Q9P2N2 729 aa11.81□□□□□ -0.52
NXF1-211ENST00000531709 TCRBV9S1A1TA0A576 114 aa11.8□□□□□ -0.52
NXF1-211ENST00000531709 MEI4A8MW99 385 aa11.8□□□□□ -0.52
NXF1-211ENST00000531709 LSM8O95777 96 aaKnown RBP11.8□□□□□ -0.52
NXF1-211ENST00000531709 OGDHQ02218 1023 aa11.8□□□□□ -0.52
NXF1-211ENST00000531709 BIRC2Q13490 618 aa11.8□□□□□ -0.52
NXF1-211ENST00000531709 ACVR2BQ13705 512 aa11.8□□□□□ -0.52
NXF1-211ENST00000531709 PARP6Q2NL67 630 aa11.8□□□□□ -0.52
NXF1-211ENST00000531709 PTPN20Q4JDL3 420 aa11.8□□□□□ -0.52
NXF1-211ENST00000531709 MSS51Q4VC12 460 aa11.8□□□□□ -0.52
NXF1-211ENST00000531709 RABGAP1LQ5R372 815 aa11.8□□□□□ -0.52
NXF1-211ENST00000531709 RAPH1Q70E73 1250 aa11.8□□□□□ -0.52
NXF1-211ENST00000531709 FAM83AQ86UY5 434 aa11.8□□□□□ -0.52
NXF1-211ENST00000531709 RASSF3Q86WH2 238 aa11.8□□□□□ -0.52
NXF1-211ENST00000531709 OLIG1Q8TAK6 271 aa11.8□□□□□ -0.52
NXF1-211ENST00000531709 SLC5A4Q9NY91 659 aa11.8□□□□□ -0.52
NXF1-211ENST00000531709 RABGEF1Q9UJ41 708 aa11.8□□□□□ -0.52
NXF1-211ENST00000531709 FIS1Q9Y3D6 152 aa11.8□□□□□ -0.52
NXF1-211ENST00000531709 SMCHD1A6NHR9 2005 aa11.8□□□□□ -0.52
NXF1-211ENST00000531709 GNAT1P11488 350 aa11.8□□□□□ -0.52
NXF1-211ENST00000531709 GPD1P21695 349 aa11.8□□□□□ -0.52
NXF1-211ENST00000531709 TYK2P29597 1187 aa11.8□□□□□ -0.52
NXF1-211ENST00000531709 IRX1P78414 480 aaPredicted RBP11.8□□□□□ -0.52
NXF1-211ENST00000531709 AP1B1Q10567 949 aa11.8□□□□□ -0.52
NXF1-211ENST00000531709 CGB2Q6NT52 195 aa11.8□□□□□ -0.52
NXF1-211ENST00000531709 WDR49Q8IV35 697 aa11.8□□□□□ -0.52
NXF1-211ENST00000531709 TEX2Q8IWB9 1127 aa11.8□□□□□ -0.52
NXF1-211ENST00000531709 FGD4Q96M96 766 aa11.8□□□□□ -0.52
NXF1-211ENST00000531709 SPATA33Q96N06 139 aa11.8□□□□□ -0.52
NXF1-211ENST00000531709 NTPCRQ9BSD7 190 aaKnown RBP11.8□□□□□ -0.52
NXF1-211ENST00000531709 PAK5Q9P286 719 aa11.8□□□□□ -0.52
NXF1-211ENST00000531709 WDR35Q9P2L0 1181 aa11.8□□□□□ -0.52
NXF1-211ENST00000531709 BHMG1C9JSJ3 638 aaPredicted RBP11.8□□□□□ -0.52
NXF1-211ENST00000531709 CREB3O43889 395 aa11.8□□□□□ -0.52
NXF1-211ENST00000531709 ADCY3O60266 1144 aa11.8□□□□□ -0.52
NXF1-211ENST00000531709 LRCH4O75427 683 aa11.8□□□□□ -0.52
NXF1-211ENST00000531709 TCEA3O75764 348 aa11.8□□□□□ -0.52
NXF1-211ENST00000531709 TPBGLP0DKB5 382 aa11.8□□□□□ -0.52
NXF1-211ENST00000531709 ATP4AP20648 1035 aa11.8□□□□□ -0.52
NXF1-211ENST00000531709 ARL4AP40617 200 aa11.8□□□□□ -0.52
NXF1-211ENST00000531709 CDK16Q00536 496 aa11.8□□□□□ -0.52
NXF1-211ENST00000531709 HIC1Q14526 733 aa11.8□□□□□ -0.52
NXF1-211ENST00000531709 CCDC14Q49A88 953 aa11.8□□□□□ -0.52
NXF1-211ENST00000531709 XRRA1Q6P2D8 792 aa11.8□□□□□ -0.52
NXF1-211ENST00000531709 SCYL1Q96KG9 808 aa11.8□□□□□ -0.52
NXF1-211ENST00000531709 FBXL18Q96ME1 805 aa11.8□□□□□ -0.52
NXF1-211ENST00000531709 CEP41Q9BYV8 373 aa11.8□□□□□ -0.52
NXF1-211ENST00000531709 ZNF518BQ9C0D4 1074 aa11.8□□□□□ -0.52
NXF1-211ENST00000531709 MAP3K20Q9NYL2 800 aaKnown RBP11.8□□□□□ -0.52
NXF1-211ENST00000531709 SNX9Q9Y5X1 595 aa11.8□□□□□ -0.52
NXF1-211ENST00000531709 DLEC1Q9Y238 1755 aa11.8□□□□□ -0.52
NXF1-211ENST00000531709 LCP1P13796 627 aa11.79□□□□□ -0.52
NXF1-211ENST00000531709 DPEP1P16444 411 aa11.79□□□□□ -0.52
NXF1-211ENST00000531709 RBL1P28749 1068 aa11.79□□□□□ -0.52
NXF1-211ENST00000531709 ADORA2BP29275 332 aa11.79□□□□□ -0.52
NXF1-211ENST00000531709 CAPSQ13938 189 aa11.79□□□□□ -0.52
NXF1-211ENST00000531709 TCEAL1Q15170 157 aa11.79□□□□□ -0.52
NXF1-211ENST00000531709 AMHR2Q16671 573 aa11.79□□□□□ -0.52
NXF1-211ENST00000531709 LY6KQ17RY6 165 aa11.79□□□□□ -0.52
NXF1-211ENST00000531709 C16orf46Q6P387 395 aa11.79□□□□□ -0.52
NXF1-211ENST00000531709 ISLR2Q6UXK2 745 aa11.79□□□□□ -0.52
NXF1-211ENST00000531709 LRRC74BQ6ZQY2 392 aa11.79□□□□□ -0.52
NXF1-211ENST00000531709 BRSK2Q8IWQ3 736 aa11.79□□□□□ -0.52
NXF1-211ENST00000531709 SCUBE1Q8IWY4 988 aa11.79□□□□□ -0.52
NXF1-211ENST00000531709 APOPT1Q96IL0 206 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms