RNA–Protein interactions for RNA: ENST00000531406.1

TM9SF1-211, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 2

Gene TM9SF1, Length 1,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-211ENST00000531406 DUSP15Q9H1R2 295 aaPredicted RBP13.64□□□□□ -0.23
TM9SF1-211ENST00000531406 SLC39A2Q9NP94 309 aa13.64□□□□□ -0.23
TM9SF1-211ENST00000531406 RXFP3Q9NSD7 469 aa13.64□□□□□ -0.23
TM9SF1-211ENST00000531406 TMEM30AQ9NV96 361 aa13.64□□□□□ -0.23
TM9SF1-211ENST00000531406 CGNQ9P2M7 1197 aaKnown RBP13.64□□□□□ -0.23
TM9SF1-211ENST00000531406 NXF1Q9UBU9 619 aaKnown RBP13.64□□□□□ -0.23
TM9SF1-211ENST00000531406 CPQQ9Y646 472 aa13.64□□□□□ -0.23
TM9SF1-211ENST00000531406 PVALEFA0A1B0GWK0 134 aa13.63□□□□□ -0.23
TM9SF1-211ENST00000531406 TM4SF5O14894 197 aa13.63□□□□□ -0.23
TM9SF1-211ENST00000531406 EXOC3O60645 756 aa13.63□□□□□ -0.23
TM9SF1-211ENST00000531406 PHACTR2O75167 634 aa13.63□□□□□ -0.23
TM9SF1-211ENST00000531406 ABL1P00519 1130 aa13.63□□□□□ -0.23
TM9SF1-211ENST00000531406 OAS1P00973 400 aaKnown RBP13.63□□□□□ -0.23
TM9SF1-211ENST00000531406 CYP17A1P05093 508 aa13.63□□□□□ -0.23
TM9SF1-211ENST00000531406 MPLP40238 635 aa13.63□□□□□ -0.23
TM9SF1-211ENST00000531406 ELF2Q15723 593 aa13.63□□□□□ -0.23
TM9SF1-211ENST00000531406 KNOP1Q1ED39 458 aaKnown RBP13.63□□□□□ -0.23
TM9SF1-211ENST00000531406 FOXD4L6Q3SYB3 417 aaPredicted RBP13.63□□□□□ -0.23
TM9SF1-211ENST00000531406 STPG1Q5TH74 334 aa13.63□□□□□ -0.23
TM9SF1-211ENST00000531406 FOXD4L3Q6VB84 417 aaPredicted RBP13.63□□□□□ -0.23
TM9SF1-211ENST00000531406 ADGRG2Q8IZP9 1017 aa13.63□□□□□ -0.23
TM9SF1-211ENST00000531406 B3GALNT2Q8NCR0 500 aa13.63□□□□□ -0.23
TM9SF1-211ENST00000531406 PLEKHO2Q8TD55 490 aa13.63□□□□□ -0.23
TM9SF1-211ENST00000531406 SYAP1Q96A49 352 aaPredicted RBP13.63□□□□□ -0.23
TM9SF1-211ENST00000531406 SMOC1Q9H4F8 434 aa13.63□□□□□ -0.23
TM9SF1-211ENST00000531406 VPS45Q9NRW7 570 aa13.63□□□□□ -0.23
TM9SF1-211ENST00000531406 SMPD4Q9NXE4 827 aa13.63□□□□□ -0.23
TM9SF1-211ENST00000531406 CFAP97Q9P2B7 532 aa13.63□□□□□ -0.23
TM9SF1-211ENST00000531406 EPG5Q9HCE0 2579 aa13.62□□□□□ -0.23
TM9SF1-211ENST00000531406 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.62□□□□□ -0.23
TM9SF1-211ENST00000531406 ANTXRLA6NF34 631 aa13.62□□□□□ -0.23
TM9SF1-211ENST00000531406 SLC9A3R1O14745 358 aaPredicted RBP13.62□□□□□ -0.23
TM9SF1-211ENST00000531406 SCAMP3O14828 347 aaKnown RBP13.62□□□□□ -0.23
TM9SF1-211ENST00000531406 RHOBTB1O94844 696 aa13.62□□□□□ -0.23
TM9SF1-211ENST00000531406 ZSCAN22P10073 491 aaPredicted RBP13.62□□□□□ -0.23
TM9SF1-211ENST00000531406 YWHAQP27348 245 aa13.62□□□□□ -0.23
TM9SF1-211ENST00000531406 AFMP43652 599 aa13.62□□□□□ -0.23
TM9SF1-211ENST00000531406 ME1P48163 572 aa13.62□□□□□ -0.23
TM9SF1-211ENST00000531406 CASP4P49662 377 aa13.62□□□□□ -0.23
TM9SF1-211ENST00000531406 DGKEP52429 567 aa13.62□□□□□ -0.23
TM9SF1-211ENST00000531406 CDH8P55286 799 aa13.62□□□□□ -0.23
TM9SF1-211ENST00000531406 SEC13P55735 322 aa13.62□□□□□ -0.23
TM9SF1-211ENST00000531406 CUL4BQ13620 913 aa13.62□□□□□ -0.23
TM9SF1-211ENST00000531406 DHCR24Q15392 516 aa13.62□□□□□ -0.23
TM9SF1-211ENST00000531406 C2orf27AQ580R0 203 aa13.62□□□□□ -0.23
TM9SF1-211ENST00000531406 RESP18Q5W5W9 173 aa13.62□□□□□ -0.23
TM9SF1-211ENST00000531406 NUP93Q8N1F7 819 aa13.62□□□□□ -0.23
TM9SF1-211ENST00000531406 TSTD1Q8NFU3 115 aa13.62□□□□□ -0.23
TM9SF1-211ENST00000531406 SLITRK1Q96PX8 696 aa13.62□□□□□ -0.23
TM9SF1-211ENST00000531406 SMYD3Q9H7B4 428 aa13.62□□□□□ -0.23
TM9SF1-211ENST00000531406 VRTNQ9H8Y1 702 aa13.62□□□□□ -0.23
TM9SF1-211ENST00000531406 FAM13BQ9NYF5 915 aa13.62□□□□□ -0.23
TM9SF1-211ENST00000531406 PCDHA7Q9UN72 937 aa13.62□□□□□ -0.23
TM9SF1-211ENST00000531406 SPTBN2O15020 2390 aa13.62□□□□□ -0.23
TM9SF1-211ENST00000531406 TCHHQ07283 1943 aa13.62□□□□□ -0.23
TM9SF1-211ENST00000531406 RTN3O95197 1032 aaPredicted RBP13.61□□□□□ -0.23
TM9SF1-211ENST00000531406 SLC6A11P48066 632 aa13.61□□□□□ -0.23
TM9SF1-211ENST00000531406 AP3M2P53677 418 aa13.61□□□□□ -0.23
TM9SF1-211ENST00000531406 CLDN10P78369 228 aa13.61□□□□□ -0.23
TM9SF1-211ENST00000531406 MESP2Q0VG99 397 aa13.61□□□□□ -0.23
TM9SF1-211ENST00000531406 IFRD2Q12894 506 aaPredicted RBP13.61□□□□□ -0.23
TM9SF1-211ENST00000531406 BIRC3Q13489 604 aa13.61□□□□□ -0.23
TM9SF1-211ENST00000531406 RHBDF2Q6PJF5 856 aa13.61□□□□□ -0.23
TM9SF1-211ENST00000531406 PAQR9Q6ZVX9 377 aa13.61□□□□□ -0.23
TM9SF1-211ENST00000531406 DDX42Q86XP3 938 aaKnown RBP eCLIP13.61□□□□□ -0.23
TM9SF1-211ENST00000531406 GRAMD1CQ8IYS0 662 aa13.61□□□□□ -0.23
TM9SF1-211ENST00000531406 CCDC33Q8N5R6 958 aa13.61□□□□□ -0.23
TM9SF1-211ENST00000531406 PDZD8Q8NEN9 1154 aa13.61□□□□□ -0.23
TM9SF1-211ENST00000531406 GOLGA5Q8TBA6 731 aa13.61□□□□□ -0.23
TM9SF1-211ENST00000531406 KCNK16Q96T55 309 aa13.61□□□□□ -0.23
TM9SF1-211ENST00000531406 PNKPQ96T60 521 aa13.61□□□□□ -0.23
TM9SF1-211ENST00000531406 CHORDC1Q9UHD1 332 aaPredicted RBP13.61□□□□□ -0.23
TM9SF1-211ENST00000531406 MMP17Q9ULZ9 603 aa13.61□□□□□ -0.23
TM9SF1-211ENST00000531406 INVSQ9Y283 1065 aa13.61□□□□□ -0.23
TM9SF1-211ENST00000531406 ATP6V1DQ9Y5K8 247 aa13.61□□□□□ -0.23
TM9SF1-211ENST00000531406 ATP8B3O60423 1300 aa13.61□□□□□ -0.23
TM9SF1-211ENST00000531406 BCLAF3A2AJT9 711 aaKnown RBP13.6□□□□□ -0.23
TM9SF1-211ENST00000531406 LRRIQ3A6PVS8 624 aaPredicted RBP13.6□□□□□ -0.23
TM9SF1-211ENST00000531406 TNFRSF10BO14763 440 aa13.6□□□□□ -0.23
TM9SF1-211ENST00000531406 ADH1CP00326 375 aa13.6□□□□□ -0.23
TM9SF1-211ENST00000531406 F13A1P00488 732 aa13.6□□□□□ -0.23
TM9SF1-211ENST00000531406 C4BPAP04003 597 aaKnown RBP13.6□□□□□ -0.23
TM9SF1-211ENST00000531406 MBL2P11226 248 aaPredicted RBP13.6□□□□□ -0.23
TM9SF1-211ENST00000531406 MRPS21P82921 87 aaKnown RBP13.6□□□□□ -0.23
TM9SF1-211ENST00000531406 CREB5Q02930 508 aa13.6□□□□□ -0.23
TM9SF1-211ENST00000531406 NCOA4Q13772 614 aa13.6□□□□□ -0.23
TM9SF1-211ENST00000531406 ZNF699Q32M78 642 aa13.6□□□□□ -0.23
TM9SF1-211ENST00000531406 USP39Q53GS9 565 aaKnown RBP13.6□□□□□ -0.23
TM9SF1-211ENST00000531406 ZNF667Q5HYK9 610 aa13.6□□□□□ -0.23
TM9SF1-211ENST00000531406 ATL3Q6DD88 541 aa13.6□□□□□ -0.23
TM9SF1-211ENST00000531406 TCEAL6Q6IPX3 200 aa13.6□□□□□ -0.23
TM9SF1-211ENST00000531406 ANO7Q6IWH7 933 aa13.6□□□□□ -0.23
TM9SF1-211ENST00000531406 FAM35AQ86V20 835 aa13.6□□□□□ -0.23
TM9SF1-211ENST00000531406 C11orf74Q86VG3 221 aa13.6□□□□□ -0.23
TM9SF1-211ENST00000531406 RASSF3Q86WH2 238 aa13.6□□□□□ -0.23
TM9SF1-211ENST00000531406 SFTPA1Q8IWL2 248 aa13.6□□□□□ -0.23
TM9SF1-211ENST00000531406 SCAMP5Q8TAC9 235 aa13.6□□□□□ -0.23
TM9SF1-211ENST00000531406 PARD3BQ8TEW8 1205 aa13.6□□□□□ -0.23
TM9SF1-211ENST00000531406 OVCA2Q8WZ82 227 aa13.6□□□□□ -0.23
TM9SF1-211ENST00000531406 TCEAL3Q969E4 200 aa13.6□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms