RNA–Protein interactions for RNA: ENST00000531141.1

CD44-233, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2

Gene CD44, Length 537 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-233ENST00000531141 MRIQ9BWK5 157 aa4.58□□□□□ -1.68
CD44-233ENST00000531141 MAGEB5Q9BZ81 275 aa4.58□□□□□ -1.68
CD44-233ENST00000531141 IKZF4Q9H2S9 585 aa4.58□□□□□ -1.68
CD44-233ENST00000531141 CERS4Q9HA82 394 aa4.58□□□□□ -1.68
CD44-233ENST00000531141 GBA2Q9HCG7 927 aaPredicted RBP4.58□□□□□ -1.68
CD44-233ENST00000531141 NLRC4Q9NPP4 1024 aa4.58□□□□□ -1.68
CD44-233ENST00000531141 CHST12Q9NRB3 414 aa4.58□□□□□ -1.68
CD44-233ENST00000531141 DKK4Q9UBT3 224 aa4.58□□□□□ -1.68
CD44-233ENST00000531141 A1L4Q6 167 aa4.57□□□□□ -1.68
CD44-233ENST00000531141 MGST3O14880 152 aa4.57□□□□□ -1.68
CD44-233ENST00000531141 AREL1O15033 823 aa4.57□□□□□ -1.68
CD44-233ENST00000531141 NCK2O43639 380 aa4.57□□□□□ -1.68
CD44-233ENST00000531141 TJP3O95049 919 aa4.57□□□□□ -1.68
CD44-233ENST00000531141 FESP07332 822 aa4.57□□□□□ -1.68
CD44-233ENST00000531141 EBLN1P0CF75 366 aa4.57□□□□□ -1.68
CD44-233ENST00000531141 LIPAP38571 399 aa4.57□□□□□ -1.68
CD44-233ENST00000531141 HTR3AP46098 478 aa4.57□□□□□ -1.68
CD44-233ENST00000531141 ALDH9A1P49189 494 aa4.57□□□□□ -1.68
CD44-233ENST00000531141 RARRES1P49788 294 aa4.57□□□□□ -1.68
CD44-233ENST00000531141 ITGA8P53708 1063 aa4.57□□□□□ -1.68
CD44-233ENST00000531141 SP2Q02086 613 aa4.57□□□□□ -1.68
CD44-233ENST00000531141 SLC35G1Q2M3R5 365 aa4.57□□□□□ -1.68
CD44-233ENST00000531141 PTCHD3Q3KNS1 767 aa4.57□□□□□ -1.68
CD44-233ENST00000531141 FAM209BQ5JX69 171 aa4.57□□□□□ -1.68
CD44-233ENST00000531141 DGKKQ5KSL6 1271 aa4.57□□□□□ -1.68
CD44-233ENST00000531141 TREML2Q5T2D2 321 aa4.57□□□□□ -1.68
CD44-233ENST00000531141 ANKRD16Q6P6B7 361 aa4.57□□□□□ -1.68
CD44-233ENST00000531141 ZNF804AQ7Z570 1209 aa4.57□□□□□ -1.68
CD44-233ENST00000531141 WDR53Q7Z5U6 358 aaPredicted RBP4.57□□□□□ -1.68
CD44-233ENST00000531141 KCTD20Q7Z5Y7 419 aa4.57□□□□□ -1.68
CD44-233ENST00000531141 FAM186BQ8IYM0 893 aa4.57□□□□□ -1.68
CD44-233ENST00000531141 VGLL2Q8N8G2 317 aa4.57□□□□□ -1.68
CD44-233ENST00000531141 CAGE1Q8TC20 777 aa4.57□□□□□ -1.68
CD44-233ENST00000531141 R3HDM4Q96D70 268 aa4.57□□□□□ -1.68
CD44-233ENST00000531141 RSPRY1Q96DX4 576 aa4.57□□□□□ -1.68
CD44-233ENST00000531141 VN1R3Q9BXE9 311 aa4.57□□□□□ -1.68
CD44-233ENST00000531141 INO80BQ9C086 356 aaPredicted RBP4.57□□□□□ -1.68
CD44-233ENST00000531141 TRIM36Q9NQ86 728 aa4.57□□□□□ -1.68
CD44-233ENST00000531141 ARHGEF3Q9NR81 526 aa4.57□□□□□ -1.68
CD44-233ENST00000531141 SLC17A6Q9P2U8 582 aa4.57□□□□□ -1.68
CD44-233ENST00000531141 DKK3Q9UBP4 350 aa4.57□□□□□ -1.68
CD44-233ENST00000531141 TLK1Q9UKI8 766 aa4.57□□□□□ -1.68
CD44-233ENST00000531141 ENTPD2Q9Y5L3 495 aa4.57□□□□□ -1.68
CD44-233ENST00000531141 SALL3Q9BXA9 1300 aa4.56□□□□□ -1.68
CD44-233ENST00000531141 M0R3H8 397 aa4.56□□□□□ -1.68
CD44-233ENST00000531141 FGF18O76093 207 aa4.56□□□□□ -1.68
CD44-233ENST00000531141 PRKCBP05771 671 aa4.56□□□□□ -1.68
CD44-233ENST00000531141 IDEP14735 1019 aa4.56□□□□□ -1.68
CD44-233ENST00000531141 NDUFB7P17568 137 aa4.56□□□□□ -1.68
CD44-233ENST00000531141 DRD4P21917 467 aa4.56□□□□□ -1.68
CD44-233ENST00000531141 UQCRC1P31930 480 aa4.56□□□□□ -1.68
CD44-233ENST00000531141 PLA2G5P39877 138 aa4.56□□□□□ -1.68
CD44-233ENST00000531141 PGDP52209 483 aa4.56□□□□□ -1.68
CD44-233ENST00000531141 HMGA2P52926 109 aa4.56□□□□□ -1.68
CD44-233ENST00000531141 COPAP53621 1224 aa4.56□□□□□ -1.68
CD44-233ENST00000531141 CACNA2D1P54289 1103 aa4.56□□□□□ -1.68
CD44-233ENST00000531141 COL10A1Q03692 680 aa4.56□□□□□ -1.68
CD44-233ENST00000531141 STK3Q13188 491 aa4.56□□□□□ -1.68
CD44-233ENST00000531141 SLC9A4Q6AI14 798 aa4.56□□□□□ -1.68
CD44-233ENST00000531141 HIBCHQ6NVY1 386 aaPredicted RBP4.56□□□□□ -1.68
CD44-233ENST00000531141 XRRA1Q6P2D8 792 aa4.56□□□□□ -1.68
CD44-233ENST00000531141 LRRC71Q8N4P6 559 aa4.56□□□□□ -1.68
CD44-233ENST00000531141 ACRBPQ8NEB7 543 aa4.56□□□□□ -1.68
CD44-233ENST00000531141 RP9Q8TA86 221 aaKnown RBP4.56□□□□□ -1.68
CD44-233ENST00000531141 ZNF384Q8TF68 577 aa4.56□□□□□ -1.68
CD44-233ENST00000531141 LRRC46Q96FV0 321 aa4.56□□□□□ -1.68
CD44-233ENST00000531141 ZDHHC12Q96GR4 267 aa4.56□□□□□ -1.68
CD44-233ENST00000531141 UROC1Q96N76 676 aa4.56□□□□□ -1.68
CD44-233ENST00000531141 C17orf80Q9BSJ5 609 aa4.56□□□□□ -1.68
CD44-233ENST00000531141 ALG13Q9NP73 1137 aaKnown RBP4.56□□□□□ -1.68
CD44-233ENST00000531141 SERTAD4Q9NUC0 356 aa4.56□□□□□ -1.68
CD44-233ENST00000531141 TBC1D23Q9NUY8 699 aa4.56□□□□□ -1.68
CD44-233ENST00000531141 DNAJB11Q9UBS4 358 aa4.56□□□□□ -1.68
CD44-233ENST00000531141 GABRQQ9UN88 632 aa4.56□□□□□ -1.68
CD44-233ENST00000531141 HPSEQ9Y251 543 aa4.56□□□□□ -1.68
CD44-233ENST00000531141 A0A087WZ62 844 aa4.55□□□□□ -1.68
CD44-233ENST00000531141 ZAR1LA6NP61 321 aa4.55□□□□□ -1.68
CD44-233ENST00000531141 PSMD9O00233 223 aa4.55□□□□□ -1.68
CD44-233ENST00000531141 DLDP09622 509 aaKnown RBP4.55□□□□□ -1.68
CD44-233ENST00000531141 HARSP12081 509 aaKnown RBP4.55□□□□□ -1.68
CD44-233ENST00000531141 HGFP14210 728 aa4.55□□□□□ -1.68
CD44-233ENST00000531141 RBL1P28749 1068 aa4.55□□□□□ -1.68
CD44-233ENST00000531141 SLC5A2P31639 672 aa4.55□□□□□ -1.68
CD44-233ENST00000531141 CCT8P50990 548 aa4.55□□□□□ -1.68
CD44-233ENST00000531141 SOX10P56693 466 aa4.55□□□□□ -1.68
CD44-233ENST00000531141 KCNAB1Q14722 419 aa4.55□□□□□ -1.68
CD44-233ENST00000531141 ARL13BQ3SXY8 428 aa4.55□□□□□ -1.68
CD44-233ENST00000531141 FAM153CQ494X1 144 aa4.55□□□□□ -1.68
CD44-233ENST00000531141 RRAGBQ5VZM2 374 aa4.55□□□□□ -1.68
CD44-233ENST00000531141 MTHFD1LQ6UB35 978 aa4.55□□□□□ -1.68
CD44-233ENST00000531141 OLFML1Q6UWY5 402 aa4.55□□□□□ -1.68
CD44-233ENST00000531141 TOGARAM2Q6ZUX3 1019 aa4.55□□□□□ -1.68
CD44-233ENST00000531141 MORC1Q86VD1 984 aa4.55□□□□□ -1.68
CD44-233ENST00000531141 CAND1Q86VP6 1230 aaKnown RBP4.55□□□□□ -1.68
CD44-233ENST00000531141 KRT73Q86Y46 540 aa4.55□□□□□ -1.68
CD44-233ENST00000531141 TXLNBQ8N3L3 684 aa4.55□□□□□ -1.68
CD44-233ENST00000531141 CCDC150Q8NCX0 1101 aa4.55□□□□□ -1.68
CD44-233ENST00000531141 SIMC1Q8NDZ2 872 aa4.55□□□□□ -1.68
CD44-233ENST00000531141 XAGE5Q8WWM1 108 aa4.55□□□□□ -1.68
CD44-233ENST00000531141 TBC1D5Q92609 795 aa4.55□□□□□ -1.68
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms