RNA–Protein interactions for RNA: ENST00000531068.5

CAPN1-221, Transcript of calpain 1, humanhuman

TSL 4

Gene CAPN1, Length 496 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-221ENST00000531068 TRIM49P0CI25 452 aa11.66□□□□□ -0.54
CAPN1-221ENST00000531068 TRIM49CP0CI26 452 aa11.66□□□□□ -0.54
CAPN1-221ENST00000531068 NDST1P52848 882 aa11.66□□□□□ -0.54
CAPN1-221ENST00000531068 LRRC63Q05C16 580 aa11.66□□□□□ -0.54
CAPN1-221ENST00000531068 PPP3CAQ08209 521 aa11.66□□□□□ -0.54
CAPN1-221ENST00000531068 FZD5Q13467 585 aa11.66□□□□□ -0.54
CAPN1-221ENST00000531068 LRRC32Q14392 662 aa11.66□□□□□ -0.54
CAPN1-221ENST00000531068 WDR44Q5JSH3 913 aa11.66□□□□□ -0.54
CAPN1-221ENST00000531068 DGKKQ5KSL6 1271 aa11.66□□□□□ -0.54
CAPN1-221ENST00000531068 SCARA5Q6ZMJ2 495 aa11.66□□□□□ -0.54
CAPN1-221ENST00000531068 FRMD5Q7Z6J6 570 aa11.66□□□□□ -0.54
CAPN1-221ENST00000531068 ACOT1Q86TX2 421 aa11.66□□□□□ -0.54
CAPN1-221ENST00000531068 ZC3H3Q8IXZ2 948 aaKnown RBP11.66□□□□□ -0.54
CAPN1-221ENST00000531068 NUP93Q8N1F7 819 aa11.66□□□□□ -0.54
CAPN1-221ENST00000531068 TTC39CQ8N584 583 aa11.66□□□□□ -0.54
CAPN1-221ENST00000531068 PDZD8Q8NEN9 1154 aa11.66□□□□□ -0.54
CAPN1-221ENST00000531068 TAS1R2Q8TE23 839 aa11.66□□□□□ -0.54
CAPN1-221ENST00000531068 OVCA2Q8WZ82 227 aa11.66□□□□□ -0.54
CAPN1-221ENST00000531068 ZFYVE19Q96K21 471 aa11.66□□□□□ -0.54
CAPN1-221ENST00000531068 CYP2S1Q96SQ9 504 aa11.66□□□□□ -0.54
CAPN1-221ENST00000531068 ZNF518BQ9C0D4 1074 aa11.66□□□□□ -0.54
CAPN1-221ENST00000531068 NIF3L1Q9GZT8 377 aa11.66□□□□□ -0.54
CAPN1-221ENST00000531068 DACH1Q9UI36 760 aa11.66□□□□□ -0.54
CAPN1-221ENST00000531068 NME7Q9Y5B8 376 aa11.66□□□□□ -0.54
CAPN1-221ENST00000531068 NCANO14594 1321 aa11.65□□□□□ -0.54
CAPN1-221ENST00000531068 ZNF840PA6NDX5 716 aa11.65□□□□□ -0.54
CAPN1-221ENST00000531068 LRRC10BA6NIK2 292 aa11.65□□□□□ -0.54
CAPN1-221ENST00000531068 SHISA7A6NL88 538 aa11.65□□□□□ -0.54
CAPN1-221ENST00000531068 SMTNL1A8MU46 457 aa11.65□□□□□ -0.54
CAPN1-221ENST00000531068 SPECC1L-ADORA2AF8WAN1 911 aa11.65□□□□□ -0.54
CAPN1-221ENST00000531068 CLDN5O00501 218 aa11.65□□□□□ -0.54
CAPN1-221ENST00000531068 ABL1P00519 1130 aa11.65□□□□□ -0.54
CAPN1-221ENST00000531068 PTMAP06454 111 aaKnown RBP11.65□□□□□ -0.54
CAPN1-221ENST00000531068 YWHAQP27348 245 aa11.65□□□□□ -0.54
CAPN1-221ENST00000531068 RAP1GAPP47736 663 aa11.65□□□□□ -0.54
CAPN1-221ENST00000531068 CSTF1Q05048 431 aaKnown RBP11.65□□□□□ -0.54
CAPN1-221ENST00000531068 TAF10Q12962 218 aa11.65□□□□□ -0.54
CAPN1-221ENST00000531068 NR1H3Q13133 447 aa11.65□□□□□ -0.54
CAPN1-221ENST00000531068 RUNX3Q13761 415 aa11.65□□□□□ -0.54
CAPN1-221ENST00000531068 ANKRD40Q6AI12 368 aa11.65□□□□□ -0.54
CAPN1-221ENST00000531068 FAM35AQ86V20 835 aa11.65□□□□□ -0.54
CAPN1-221ENST00000531068 ZNF687Q8N1G0 1237 aa11.65□□□□□ -0.54
CAPN1-221ENST00000531068 SYNPOQ8N3V7 929 aa11.65□□□□□ -0.54
CAPN1-221ENST00000531068 KIAA1958Q8N8K9 716 aa11.65□□□□□ -0.54
CAPN1-221ENST00000531068 ARL14EPQ8N8R7 260 aaPredicted RBP11.65□□□□□ -0.54
CAPN1-221ENST00000531068 STKLD1Q8NE28 680 aa11.65□□□□□ -0.54
CAPN1-221ENST00000531068 FBXL13Q8NEE6 735 aa11.65□□□□□ -0.54
CAPN1-221ENST00000531068 NELFBQ8WX92 580 aa11.65□□□□□ -0.54
CAPN1-221ENST00000531068 SMARCD1Q96GM5 515 aa11.65□□□□□ -0.54
CAPN1-221ENST00000531068 NT5C1AQ9BXI3 368 aa11.65□□□□□ -0.54
CAPN1-221ENST00000531068 FAM126AQ9BYI3 521 aaPredicted RBP11.65□□□□□ -0.54
CAPN1-221ENST00000531068 SDCBP2Q9H190 292 aa11.65□□□□□ -0.54
CAPN1-221ENST00000531068 CHRDQ9H2X0 955 aa11.65□□□□□ -0.54
CAPN1-221ENST00000531068 FAM124BQ9H5Z6 455 aaPredicted RBP11.65□□□□□ -0.54
CAPN1-221ENST00000531068 METTL14Q9HCE5 456 aaKnown RBP11.65□□□□□ -0.54
CAPN1-221ENST00000531068 DMAP1Q9NPF5 467 aaPredicted RBP11.65□□□□□ -0.54
CAPN1-221ENST00000531068 FANCLQ9NW38 375 aa11.65□□□□□ -0.54
CAPN1-221ENST00000531068 RAB20Q9NX57 234 aa11.65□□□□□ -0.54
CAPN1-221ENST00000531068 GTSE1Q9NYZ3 720 aa11.65□□□□□ -0.54
CAPN1-221ENST00000531068 GCNT4Q9P109 453 aa11.65□□□□□ -0.54
CAPN1-221ENST00000531068 ARHGAP26Q9UNA1 814 aa11.65□□□□□ -0.54
CAPN1-221ENST00000531068 CCL26Q9Y258 94 aa11.65□□□□□ -0.54
CAPN1-221ENST00000531068 ZNF318Q5VUA4 2279 aa11.65□□□□□ -0.55
CAPN1-221ENST00000531068 TADA3O75528 432 aa11.64□□□□□ -0.55
CAPN1-221ENST00000531068 AP1G2O75843 785 aa11.64□□□□□ -0.55
CAPN1-221ENST00000531068 CHRNB1P11230 501 aa11.64□□□□□ -0.55
CAPN1-221ENST00000531068 TCF3P15923 654 aa11.64□□□□□ -0.55
CAPN1-221ENST00000531068 CTHP32929 405 aa11.64□□□□□ -0.55
CAPN1-221ENST00000531068 ASPAP45381 313 aa11.64□□□□□ -0.55
CAPN1-221ENST00000531068 MXI1P50539 228 aa11.64□□□□□ -0.55
CAPN1-221ENST00000531068 NRLP54845 237 aa11.64□□□□□ -0.55
CAPN1-221ENST00000531068 USP46P62068 366 aa11.64□□□□□ -0.55
CAPN1-221ENST00000531068 TNK2Q07912 1038 aa11.64□□□□□ -0.55
CAPN1-221ENST00000531068 INCA1Q0VD86 236 aa11.64□□□□□ -0.55
CAPN1-221ENST00000531068 PAK1Q13153 545 aa11.64□□□□□ -0.55
CAPN1-221ENST00000531068 MTF1Q14872 753 aa11.64□□□□□ -0.55
CAPN1-221ENST00000531068 TCERG1LQ5VWI1 586 aa11.64□□□□□ -0.55
CAPN1-221ENST00000531068 SPOPLQ6IQ16 392 aa11.64□□□□□ -0.55
CAPN1-221ENST00000531068 PAQR9Q6ZVX9 377 aa11.64□□□□□ -0.55
CAPN1-221ENST00000531068 TTC8Q8TAM2 541 aa11.64□□□□□ -0.55
CAPN1-221ENST00000531068 SLC2A14Q8TDB8 520 aa11.64□□□□□ -0.55
CAPN1-221ENST00000531068 SH3RF2Q8TEC5 729 aa11.64□□□□□ -0.55
CAPN1-221ENST00000531068 OSCP1Q8WVF1 389 aa11.64□□□□□ -0.55
CAPN1-221ENST00000531068 ATRIPQ8WXE1 791 aa11.64□□□□□ -0.55
CAPN1-221ENST00000531068 ATP2A3Q93084 1043 aa11.64□□□□□ -0.55
CAPN1-221ENST00000531068 EEF2KMTQ96G04 330 aa11.64□□□□□ -0.55
CAPN1-221ENST00000531068 MRFAP1L1Q96HT8 127 aa11.64□□□□□ -0.55
CAPN1-221ENST00000531068 KCNK16Q96T55 309 aa11.64□□□□□ -0.55
CAPN1-221ENST00000531068 FBXO44Q9H4M3 255 aa11.64□□□□□ -0.55
CAPN1-221ENST00000531068 MMRN2Q9H8L6 949 aa11.64□□□□□ -0.55
CAPN1-221ENST00000531068 SAMSN1Q9NSI8 373 aaKnown RBP11.64□□□□□ -0.55
CAPN1-221ENST00000531068 DUS2Q9NX74 493 aaKnown RBP11.64□□□□□ -0.55
CAPN1-221ENST00000531068 ARMCX3Q9UH62 379 aaPredicted RBP11.64□□□□□ -0.55
CAPN1-221ENST00000531068 NFE2L3Q9Y4A8 694 aa11.64□□□□□ -0.55
CAPN1-221ENST00000531068 BICDL2A1A5D9 508 aa11.63□□□□□ -0.55
CAPN1-221ENST00000531068 C2orf78A6NCI8 922 aa11.63□□□□□ -0.55
CAPN1-221ENST00000531068 SLC9A3R1O14745 358 aaPredicted RBP11.63□□□□□ -0.55
CAPN1-221ENST00000531068 LMNAP02545 664 aaKnown RBP11.63□□□□□ -0.55
CAPN1-221ENST00000531068 TPM2P07951 284 aa11.63□□□□□ -0.55
CAPN1-221ENST00000531068 FAM200BP0CF97 657 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms