RNA–Protein interactions for RNA: ENST00000531050.5

PTPRK-219, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 1 (best)

Gene PTPRK, Length 2,515 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-219ENST00000531050 ZSWIM1Q9BR11 485 aa8.1□□□□□ -1.11
PTPRK-219ENST00000531050 CCDC106Q9BWC9 280 aa8.1□□□□□ -1.11
PTPRK-219ENST00000531050 HOXD1Q9GZZ0 328 aa8.1□□□□□ -1.11
PTPRK-219ENST00000531050 ALG13Q9NP73 1137 aaKnown RBP8.1□□□□□ -1.11
PTPRK-219ENST00000531050 C6orf203Q9P0P8 240 aaPredicted RBP8.1□□□□□ -1.11
PTPRK-219ENST00000531050 ANKMY1Q9P2S6 941 aa8.1□□□□□ -1.11
PTPRK-219ENST00000531050 PPARGC1AQ9UBK2 798 aaKnown RBP8.1□□□□□ -1.11
PTPRK-219ENST00000531050 ASIC3Q9UHC3 531 aa8.1□□□□□ -1.11
PTPRK-219ENST00000531050 CDC14AQ9UNH5 594 aa8.1□□□□□ -1.11
PTPRK-219ENST00000531050 CPQQ9Y646 472 aa8.1□□□□□ -1.11
PTPRK-219ENST00000531050 TOGARAM1Q9Y4F4 1720 aa8.1□□□□□ -1.11
PTPRK-219ENST00000531050 FAM205AQ6ZU69 1335 aa8.1□□□□□ -1.11
PTPRK-219ENST00000531050 A0A1W2PPW3 197 aa8.1□□□□□ -1.11
PTPRK-219ENST00000531050 E5RJQ4 531 aa8.1□□□□□ -1.11
PTPRK-219ENST00000531050 EYA2O00167 538 aa8.1□□□□□ -1.11
PTPRK-219ENST00000531050 AP3B1O00203 1094 aa8.1□□□□□ -1.11
PTPRK-219ENST00000531050 SORBS3O60504 671 aa8.1□□□□□ -1.11
PTPRK-219ENST00000531050 KLHL41O60662 606 aa8.1□□□□□ -1.11
PTPRK-219ENST00000531050 DDHD2O94830 711 aa8.1□□□□□ -1.11
PTPRK-219ENST00000531050 NAGAP17050 411 aa8.1□□□□□ -1.11
PTPRK-219ENST00000531050 CES1P23141 567 aa8.1□□□□□ -1.11
PTPRK-219ENST00000531050 IST1P53990 364 aa8.1□□□□□ -1.11
PTPRK-219ENST00000531050 ATP6V0D1P61421 351 aa8.1□□□□□ -1.11
PTPRK-219ENST00000531050 BNIP3Q12983 259 aa8.1□□□□□ -1.11
PTPRK-219ENST00000531050 PRKD1Q15139 912 aaPredicted RBP8.1□□□□□ -1.11
PTPRK-219ENST00000531050 SF3B3Q15393 1217 aaKnown RBP8.1□□□□□ -1.11
PTPRK-219ENST00000531050 TRIP13Q15645 432 aaPredicted RBP8.1□□□□□ -1.11
PTPRK-219ENST00000531050 C15orf59Q2T9L4 293 aaPredicted RBP8.1□□□□□ -1.11
PTPRK-219ENST00000531050 RALGPS1Q5JS13 557 aa8.1□□□□□ -1.11
PTPRK-219ENST00000531050 CEP78Q5JTW2 689 aa8.1□□□□□ -1.11
PTPRK-219ENST00000531050 FOXR2Q6PJQ5 311 aa8.1□□□□□ -1.11
PTPRK-219ENST00000531050 KIF6Q6ZMV9 814 aa8.1□□□□□ -1.11
PTPRK-219ENST00000531050 RNF19BQ6ZMZ0 732 aa8.1□□□□□ -1.11
PTPRK-219ENST00000531050 MAMSTRQ6ZN01 415 aa8.1□□□□□ -1.11
PTPRK-219ENST00000531050 LYSMD3Q7Z3D4 306 aa8.1□□□□□ -1.11
PTPRK-219ENST00000531050 PRPF39Q86UA1 669 aaKnown RBP8.1□□□□□ -1.11
PTPRK-219ENST00000531050 IGFN1Q86VF2 1251 aa8.1□□□□□ -1.11
PTPRK-219ENST00000531050 SLC13A5Q86YT5 568 aaPredicted RBP8.1□□□□□ -1.11
PTPRK-219ENST00000531050 RELL1Q8IUW5 271 aa8.1□□□□□ -1.11
PTPRK-219ENST00000531050 CHERPQ8IWX8 916 aaKnown RBP8.1□□□□□ -1.11
PTPRK-219ENST00000531050 ALPK1Q96QP1 1244 aa8.1□□□□□ -1.11
PTPRK-219ENST00000531050 TSG101Q99816 390 aa8.1□□□□□ -1.11
PTPRK-219ENST00000531050 NUDT12Q9BQG2 462 aa8.1□□□□□ -1.11
PTPRK-219ENST00000531050 SHCBP1LQ9BZQ2 653 aa8.1□□□□□ -1.11
PTPRK-219ENST00000531050 VPS11Q9H270 941 aa8.1□□□□□ -1.11
PTPRK-219ENST00000531050 RPF2Q9H7B2 306 aaKnown RBP8.1□□□□□ -1.11
PTPRK-219ENST00000531050 FANCEQ9HB96 536 aa8.1□□□□□ -1.11
PTPRK-219ENST00000531050 PI4KBQ9UBF8 816 aa8.1□□□□□ -1.11
PTPRK-219ENST00000531050 SOX13Q9UN79 622 aa8.1□□□□□ -1.11
PTPRK-219ENST00000531050 ALG6Q9Y672 507 aa8.1□□□□□ -1.11
PTPRK-219ENST00000531050 COL5A2P05997 1499 aaPredicted RBP8.1□□□□□ -1.11
PTPRK-219ENST00000531050 TNS2Q63HR2 1409 aa8.1□□□□□ -1.11
PTPRK-219ENST00000531050 FAM170AA1A519 330 aa8.09□□□□□ -1.11
PTPRK-219ENST00000531050 MYMKA6NI61 221 aa8.09□□□□□ -1.11
PTPRK-219ENST00000531050 HAT1O14929 419 aa8.09□□□□□ -1.11
PTPRK-219ENST00000531050 FKBP9O95302 570 aa8.09□□□□□ -1.11
PTPRK-219ENST00000531050 H6PDO95479 791 aa8.09□□□□□ -1.11
PTPRK-219ENST00000531050 CYP1A2P05177 515 aa8.09□□□□□ -1.11
PTPRK-219ENST00000531050 VEGFAP15692 232 aaPredicted RBP8.09□□□□□ -1.11
PTPRK-219ENST00000531050 ETFBP38117 255 aa8.09□□□□□ -1.11
PTPRK-219ENST00000531050 EPHB1P54762 984 aa8.09□□□□□ -1.11
PTPRK-219ENST00000531050 TPTEP56180 551 aa8.09□□□□□ -1.11
PTPRK-219ENST00000531050 P2RX3P56373 397 aa8.09□□□□□ -1.11
PTPRK-219ENST00000531050 FKBP3Q00688 224 aaKnown RBP8.09□□□□□ -1.11
PTPRK-219ENST00000531050 EPHA7Q15375 998 aa8.09□□□□□ -1.11
PTPRK-219ENST00000531050 SLC15A2Q16348 729 aa8.09□□□□□ -1.11
PTPRK-219ENST00000531050 ANKRD26P1Q6NSI1 321 aa8.09□□□□□ -1.11
PTPRK-219ENST00000531050 CYP4F22Q6NT55 531 aa8.09□□□□□ -1.11
PTPRK-219ENST00000531050 SLC30A10Q6XR72 485 aa8.09□□□□□ -1.11
PTPRK-219ENST00000531050 MFSD6Q6ZSS7 791 aa8.09□□□□□ -1.11
PTPRK-219ENST00000531050 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.09□□□□□ -1.11
PTPRK-219ENST00000531050 CCDC124Q96CT7 223 aaKnown RBP8.09□□□□□ -1.11
PTPRK-219ENST00000531050 ZNF486Q96H40 463 aaPredicted RBP8.09□□□□□ -1.11
PTPRK-219ENST00000531050 ZNF594Q96JF6 807 aaPredicted RBP8.09□□□□□ -1.11
PTPRK-219ENST00000531050 STRBPQ96SI9 672 aaKnown RBP8.09□□□□□ -1.11
PTPRK-219ENST00000531050 DHRS9Q9BPW9 319 aa8.09□□□□□ -1.11
PTPRK-219ENST00000531050 ADAM33Q9BZ11 813 aa8.09□□□□□ -1.11
PTPRK-219ENST00000531050 LRRC19Q9H756 370 aa8.09□□□□□ -1.11
PTPRK-219ENST00000531050 DNAJC18Q9H819 358 aa8.09□□□□□ -1.11
PTPRK-219ENST00000531050 C12orf10Q9HB07 376 aa8.09□□□□□ -1.11
PTPRK-219ENST00000531050 SSU72Q9NP77 194 aaKnown RBP8.09□□□□□ -1.11
PTPRK-219ENST00000531050 RIC8BQ9NVN3 520 aa8.09□□□□□ -1.11
PTPRK-219ENST00000531050 SLAIN2Q9P270 581 aa8.09□□□□□ -1.11
PTPRK-219ENST00000531050 SLC17A7Q9P2U7 560 aa8.09□□□□□ -1.11
PTPRK-219ENST00000531050 DNMT3BQ9UBC3 853 aaKnown RBP8.09□□□□□ -1.11
PTPRK-219ENST00000531050 ANAPC5Q9UJX4 755 aa8.09□□□□□ -1.11
PTPRK-219ENST00000531050 POLIQ9UNA4 740 aa8.09□□□□□ -1.11
PTPRK-219ENST00000531050 EXOC7Q9UPT5 735 aa8.09□□□□□ -1.11
PTPRK-219ENST00000531050 POMPQ9Y244 141 aa8.09□□□□□ -1.11
PTPRK-219ENST00000531050 STRCQ7RTU9 1775 aa8.09□□□□□ -1.11
PTPRK-219ENST00000531050 PVALEFA0A1B0GWK0 134 aa8.09□□□□□ -1.11
PTPRK-219ENST00000531050 TRIM64BA6NI03 449 aa8.09□□□□□ -1.11
PTPRK-219ENST00000531050 MIF4GDA9UHW6 222 aaKnown RBP8.09□□□□□ -1.11
PTPRK-219ENST00000531050 PRR5-ARHGAP8B1AHC4 643 aa8.09□□□□□ -1.11
PTPRK-219ENST00000531050 POC1B-GALNT4F8VUJ3 575 aa8.09□□□□□ -1.11
PTPRK-219ENST00000531050 H3BMQ9 156 aa8.09□□□□□ -1.11
PTPRK-219ENST00000531050 H3BNH8 94 aa8.09□□□□□ -1.11
PTPRK-219ENST00000531050 TRAF5O00463 557 aa8.09□□□□□ -1.11
PTPRK-219ENST00000531050 SCO2O43819 266 aa8.09□□□□□ -1.11
PTPRK-219ENST00000531050 TSPAN1O60635 241 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms