RNA–Protein interactions for RNA: ENST00000530906.1

PCF11-205, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 628 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-205ENST00000530906 TAPT1Q6NXT6 567 aa5.88□□□□□ -1.47
PCF11-205ENST00000530906 CCDC137Q6PK04 289 aaKnown RBP5.88□□□□□ -1.47
PCF11-205ENST00000530906 TRMT10CQ7L0Y3 403 aaKnown RBP5.88□□□□□ -1.47
PCF11-205ENST00000530906 RHPN2Q8IUC4 686 aa5.88□□□□□ -1.47
PCF11-205ENST00000530906 FBXO16Q8IX29 292 aaPredicted RBP5.88□□□□□ -1.47
PCF11-205ENST00000530906 GSPT2Q8IYD1 628 aaKnown RBP5.88□□□□□ -1.47
PCF11-205ENST00000530906 CCDC105Q8IYK2 499 aa5.88□□□□□ -1.47
PCF11-205ENST00000530906 RCOR2Q8IZ40 523 aa5.88□□□□□ -1.47
PCF11-205ENST00000530906 CCDC89Q8N998 374 aa5.88□□□□□ -1.47
PCF11-205ENST00000530906 OR5B17Q8NGF7 314 aa5.88□□□□□ -1.47
PCF11-205ENST00000530906 FEZF2Q8TBJ5 459 aa5.88□□□□□ -1.47
PCF11-205ENST00000530906 AFG1LQ8WV93 481 aa5.88□□□□□ -1.47
PCF11-205ENST00000530906 ZNF606Q8WXB4 792 aa5.88□□□□□ -1.47
PCF11-205ENST00000530906 KRT35Q92764 455 aa5.88□□□□□ -1.47
PCF11-205ENST00000530906 ZBTB45Q96K62 511 aaPredicted RBP5.88□□□□□ -1.47
PCF11-205ENST00000530906 NSUN5Q96P11 429 aaKnown RBP5.88□□□□□ -1.47
PCF11-205ENST00000530906 ZIM3Q96PE6 472 aa5.88□□□□□ -1.47
PCF11-205ENST00000530906 PI4K2AQ9BTU6 479 aa5.88□□□□□ -1.47
PCF11-205ENST00000530906 CAPS2Q9BXY5 557 aa5.88□□□□□ -1.47
PCF11-205ENST00000530906 TXLNGYQ9BZA5 131 aa5.88□□□□□ -1.47
PCF11-205ENST00000530906 INO80BQ9C086 356 aaPredicted RBP5.88□□□□□ -1.47
PCF11-205ENST00000530906 XYLT2Q9H1B5 865 aa5.88□□□□□ -1.47
PCF11-205ENST00000530906 CDT1Q9H211 546 aa5.88□□□□□ -1.47
PCF11-205ENST00000530906 PABPC3Q9H361 631 aaKnown RBP5.88□□□□□ -1.47
PCF11-205ENST00000530906 CNOT10Q9H9A5 744 aaKnown RBP5.88□□□□□ -1.47
PCF11-205ENST00000530906 APOBEC3GQ9HC16 384 aaKnown RBP5.88□□□□□ -1.47
PCF11-205ENST00000530906 CISHQ9NSE2 258 aa5.88□□□□□ -1.47
PCF11-205ENST00000530906 ZDHHC18Q9NUE0 388 aa5.88□□□□□ -1.47
PCF11-205ENST00000530906 PLAAQ9Y263 795 aa5.88□□□□□ -1.47
PCF11-205ENST00000530906 TELO2Q9Y4R8 837 aa5.88□□□□□ -1.47
PCF11-205ENST00000530906 PTPRJQ12913 1337 aa5.88□□□□□ -1.47
PCF11-205ENST00000530906 MROH7Q68CQ1 1323 aa5.88□□□□□ -1.47
PCF11-205ENST00000530906 CCL15-CCL14A0A0B4J2E2 113 aa5.87□□□□□ -1.47
PCF11-205ENST00000530906 TMEM191CA6NGB0 347 aa5.87□□□□□ -1.47
PCF11-205ENST00000530906 ZSCAN5CA6NGD5 496 aaPredicted RBP5.87□□□□□ -1.47
PCF11-205ENST00000530906 TMEM110-MUSTN1A8MSY1 372 aa5.87□□□□□ -1.47
PCF11-205ENST00000530906 H0YGN5 161 aa5.87□□□□□ -1.47
PCF11-205ENST00000530906 H3BRB1 525 aa5.87□□□□□ -1.47
PCF11-205ENST00000530906 GHRHP01286 108 aa5.87□□□□□ -1.47
PCF11-205ENST00000530906 HMGCRP04035 888 aa5.87□□□□□ -1.47
PCF11-205ENST00000530906 KRT7P08729 469 aa5.87□□□□□ -1.47
PCF11-205ENST00000530906 FAM153BP0C7A2 387 aa5.87□□□□□ -1.47
PCF11-205ENST00000530906 SETSIPP0DME0 302 aa5.87□□□□□ -1.47
PCF11-205ENST00000530906 RARGP13631 454 aa5.87□□□□□ -1.47
PCF11-205ENST00000530906 INSRRP14616 1297 aa5.87□□□□□ -1.47
PCF11-205ENST00000530906 DESP17661 470 aa5.87□□□□□ -1.47
PCF11-205ENST00000530906 NR1D1P20393 614 aa5.87□□□□□ -1.47
PCF11-205ENST00000530906 MARK3P27448 753 aa5.87□□□□□ -1.47
PCF11-205ENST00000530906 ATP5DP30049 168 aa5.87□□□□□ -1.47
PCF11-205ENST00000530906 AXLP30530 894 aa5.87□□□□□ -1.47
PCF11-205ENST00000530906 ASPAP45381 313 aa5.87□□□□□ -1.47
PCF11-205ENST00000530906 GUCY2FP51841 1108 aa5.87□□□□□ -1.47
PCF11-205ENST00000530906 RNASE9P60153 205 aaKnown RBP5.87□□□□□ -1.47
PCF11-205ENST00000530906 MYL6P60660 151 aa5.87□□□□□ -1.47
PCF11-205ENST00000530906 RBP5P82980 135 aa5.87□□□□□ -1.47
PCF11-205ENST00000530906 LACTBP83111 547 aaPredicted RBP5.87□□□□□ -1.47
PCF11-205ENST00000530906 TFAMQ00059 246 aaKnown RBP5.87□□□□□ -1.47
PCF11-205ENST00000530906 ADCY2Q08462 1091 aa5.87□□□□□ -1.47
PCF11-205ENST00000530906 INCA1Q0VD86 236 aa5.87□□□□□ -1.47
PCF11-205ENST00000530906 MYO1EQ12965 1108 aa5.87□□□□□ -1.47
PCF11-205ENST00000530906 DRP2Q13474 957 aa5.87□□□□□ -1.47
PCF11-205ENST00000530906 PTK6Q13882 451 aa5.87□□□□□ -1.47
PCF11-205ENST00000530906 BYSLQ13895 437 aaKnown RBP5.87□□□□□ -1.47
PCF11-205ENST00000530906 ZNF268Q14587 947 aaPredicted RBP5.87□□□□□ -1.47
PCF11-205ENST00000530906 SIX1Q15475 284 aaPredicted RBP5.87□□□□□ -1.47
PCF11-205ENST00000530906 TRIP4Q15650 581 aaPredicted RBP5.87□□□□□ -1.47
PCF11-205ENST00000530906 CCL15Q16663 113 aa5.87□□□□□ -1.47
PCF11-205ENST00000530906 ZSCAN26Q16670 478 aa5.87□□□□□ -1.47
PCF11-205ENST00000530906 DGKDQ16760 1214 aa5.87□□□□□ -1.47
PCF11-205ENST00000530906 HADHQ16836 314 aaKnown RBP5.87□□□□□ -1.47
PCF11-205ENST00000530906 FAM153CQ494X1 144 aa5.87□□□□□ -1.47
PCF11-205ENST00000530906 FAM26DQ5JW98 314 aa5.87□□□□□ -1.47
PCF11-205ENST00000530906 DENND2CQ68D51 928 aa5.87□□□□□ -1.47
PCF11-205ENST00000530906 DNAJC24Q6P3W2 148 aa5.87□□□□□ -1.47
PCF11-205ENST00000530906 EEPD1Q7L9B9 569 aa5.87□□□□□ -1.47
PCF11-205ENST00000530906 PLEKHH3Q7Z736 793 aa5.87□□□□□ -1.47
PCF11-205ENST00000530906 VSIG1Q86XK7 387 aa5.87□□□□□ -1.47
PCF11-205ENST00000530906 RELL1Q8IUW5 271 aa5.87□□□□□ -1.47
PCF11-205ENST00000530906 ETFBKMTQ8IXQ9 262 aa5.87□□□□□ -1.47
PCF11-205ENST00000530906 CNPY4Q8N129 248 aa5.87□□□□□ -1.47
PCF11-205ENST00000530906 C2orf69Q8N8R5 385 aa5.87□□□□□ -1.47
PCF11-205ENST00000530906 ATL2Q8NHH9 583 aa5.87□□□□□ -1.47
PCF11-205ENST00000530906 IPO4Q8TEX9 1081 aaKnown RBP5.87□□□□□ -1.47
PCF11-205ENST00000530906 CPA5Q8WXQ8 436 aa5.87□□□□□ -1.47
PCF11-205ENST00000530906 PIK3R5Q8WYR1 880 aa5.87□□□□□ -1.47
PCF11-205ENST00000530906 ART4Q93070 314 aa5.87□□□□□ -1.47
PCF11-205ENST00000530906 CYFIP2Q96F07 1278 aa5.87□□□□□ -1.47
PCF11-205ENST00000530906 PGM2Q96G03 612 aa5.87□□□□□ -1.47
PCF11-205ENST00000530906 SNF8Q96H20 258 aa5.87□□□□□ -1.47
PCF11-205ENST00000530906 NLRP4Q96MN2 994 aa5.87□□□□□ -1.47
PCF11-205ENST00000530906 C11orf70Q9BRQ4 267 aa5.87□□□□□ -1.47
PCF11-205ENST00000530906 ROPN1BQ9BZX4 212 aaPredicted RBP5.87□□□□□ -1.47
PCF11-205ENST00000530906 MTMR12Q9C0I1 747 aa5.87□□□□□ -1.47
PCF11-205ENST00000530906 KATNBL1Q9H079 304 aa5.87□□□□□ -1.47
PCF11-205ENST00000530906 TUT1Q9H6E5 874 aaKnown RBP5.87□□□□□ -1.47
PCF11-205ENST00000530906 PPCSQ9HAB8 311 aa5.87□□□□□ -1.47
PCF11-205ENST00000530906 ROPN1Q9HAT0 212 aaPredicted RBP5.87□□□□□ -1.47
PCF11-205ENST00000530906 IFT122Q9HBG6 1241 aa5.87□□□□□ -1.47
PCF11-205ENST00000530906 TMBIM4Q9HC24 238 aa5.87□□□□□ -1.47
PCF11-205ENST00000530906 GBA2Q9HCG7 927 aaPredicted RBP5.87□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms