RNA–Protein interactions for RNA: ENST00000530495.1

CAPN1-219, Transcript of calpain 1, humanhuman

TSL 5

Gene CAPN1, Length 572 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-219ENST00000530495 HS2ST1Q7LGA3 356 aa15.91■□□□□ 0.14
CAPN1-219ENST00000530495 ZNF507Q8TCN5 953 aa15.91■□□□□ 0.14
CAPN1-219ENST00000530495 HPS3Q969F9 1004 aa15.91■□□□□ 0.14
CAPN1-219ENST00000530495 LRRC27Q9C0I9 530 aa15.91■□□□□ 0.14
CAPN1-219ENST00000530495 SNX25Q9H3E2 840 aa15.91■□□□□ 0.14
CAPN1-219ENST00000530495 TMEM9BQ9NQ34 198 aa15.91■□□□□ 0.14
CAPN1-219ENST00000530495 CPQQ9Y646 472 aa15.91■□□□□ 0.14
CAPN1-219ENST00000530495 MYOFQ9NZM1 2061 aa15.91■□□□□ 0.14
CAPN1-219ENST00000530495 PATE3B3GLJ2 98 aa15.9■□□□□ 0.14
CAPN1-219ENST00000530495 ALDH1A2O94788 518 aa15.9■□□□□ 0.14
CAPN1-219ENST00000530495 KAT7O95251 611 aa15.9■□□□□ 0.14
CAPN1-219ENST00000530495 ABL1P00519 1130 aa15.9■□□□□ 0.14
CAPN1-219ENST00000530495 CEACAM1P13688 526 aa15.9■□□□□ 0.14
CAPN1-219ENST00000530495 HNRNPLP14866 589 aaKnown RBP eCLIP15.9■□□□□ 0.14
CAPN1-219ENST00000530495 CSRP1P21291 193 aaKnown RBP15.9■□□□□ 0.14
CAPN1-219ENST00000530495 CACNA2D1P54289 1103 aa15.9■□□□□ 0.14
CAPN1-219ENST00000530495 SNRNP35Q16560 246 aaKnown RBP15.9■□□□□ 0.14
CAPN1-219ENST00000530495 SH3PXD2AQ5TCZ1 1133 aa15.9■□□□□ 0.14
CAPN1-219ENST00000530495 EPM2AIP1Q7L775 607 aaPredicted RBP15.9■□□□□ 0.14
CAPN1-219ENST00000530495 CYP2U1Q7Z449 544 aa15.9■□□□□ 0.14
CAPN1-219ENST00000530495 ALLCQ8N6M5 410 aa15.9■□□□□ 0.14
CAPN1-219ENST00000530495 PDILTQ8N807 584 aa15.9■□□□□ 0.14
CAPN1-219ENST00000530495 IL17RCQ8NAC3 791 aa15.9■□□□□ 0.14
CAPN1-219ENST00000530495 RDH13Q8NBN7 331 aa15.9■□□□□ 0.14
CAPN1-219ENST00000530495 OR6B3Q8NGW1 331 aa15.9■□□□□ 0.14
CAPN1-219ENST00000530495 SLITRK1Q96PX8 696 aa15.9■□□□□ 0.14
CAPN1-219ENST00000530495 USP28Q96RU2 1077 aa15.9■□□□□ 0.14
CAPN1-219ENST00000530495 TNMDQ9H2S6 317 aa15.9■□□□□ 0.14
CAPN1-219ENST00000530495 TMEM30AQ9NV96 361 aa15.9■□□□□ 0.14
CAPN1-219ENST00000530495 KBTBD4Q9NVX7 518 aa15.9■□□□□ 0.14
CAPN1-219ENST00000530495 SMPD4Q9NXE4 827 aa15.9■□□□□ 0.14
CAPN1-219ENST00000530495 WASF3Q9UPY6 502 aa15.9■□□□□ 0.14
CAPN1-219ENST00000530495 CHD6Q8TD26 2715 aa15.89■□□□□ 0.13
CAPN1-219ENST00000530495 CFAP47Q6ZTR5 3102 aa15.89■□□□□ 0.13
CAPN1-219ENST00000530495 SGK1O00141 431 aa15.89■□□□□ 0.13
CAPN1-219ENST00000530495 EIF3DO15371 548 aaKnown RBP eCLIP15.89■□□□□ 0.13
CAPN1-219ENST00000530495 TGFB1I1O43294 461 aa15.89■□□□□ 0.13
CAPN1-219ENST00000530495 KLF8O95600 359 aaPredicted RBP15.89■□□□□ 0.13
CAPN1-219ENST00000530495 APODP05090 189 aa15.89■□□□□ 0.13
CAPN1-219ENST00000530495 TNNI1P19237 187 aa15.89■□□□□ 0.13
CAPN1-219ENST00000530495 P2RY2P41231 377 aa15.89■□□□□ 0.13
CAPN1-219ENST00000530495 TNFRSF4P43489 277 aa15.89■□□□□ 0.13
CAPN1-219ENST00000530495 KIR2DL1P43626 348 aaPredicted RBP15.89■□□□□ 0.13
CAPN1-219ENST00000530495 DHPSP49366 369 aaPredicted RBP15.89■□□□□ 0.13
CAPN1-219ENST00000530495 MESP2Q0VG99 397 aa15.89■□□□□ 0.13
CAPN1-219ENST00000530495 PSMD6Q15008 389 aa15.89■□□□□ 0.13
CAPN1-219ENST00000530495 WDR72Q3MJ13 1102 aa15.89■□□□□ 0.13
CAPN1-219ENST00000530495 EMC10Q5UCC4 262 aa15.89■□□□□ 0.13
CAPN1-219ENST00000530495 DDX42Q86XP3 938 aaKnown RBP eCLIP15.89■□□□□ 0.13
CAPN1-219ENST00000530495 SFTPA1Q8IWL2 248 aa15.89■□□□□ 0.13
CAPN1-219ENST00000530495 TXNDC5Q8NBS9 432 aaKnown RBP15.89■□□□□ 0.13
CAPN1-219ENST00000530495 PIGKQ92643 395 aa15.89■□□□□ 0.13
CAPN1-219ENST00000530495 B3GNT5Q9BYG0 378 aa15.89■□□□□ 0.13
CAPN1-219ENST00000530495 ELOVL4Q9GZR5 314 aa15.89■□□□□ 0.13
CAPN1-219ENST00000530495 CFAP97Q9P2B7 532 aa15.89■□□□□ 0.13
CAPN1-219ENST00000530495 TBC1D14Q9P2M4 693 aa15.89■□□□□ 0.13
CAPN1-219ENST00000530495 EVLQ9UI08 416 aaPredicted RBP15.89■□□□□ 0.13
CAPN1-219ENST00000530495 TNRC6BQ9UPQ9 1833 aaKnown RBP15.89■□□□□ 0.13
CAPN1-219ENST00000530495 E2F8A0AVK6 867 aa15.88■□□□□ 0.13
CAPN1-219ENST00000530495 TNFRSF10BO14763 440 aa15.88■□□□□ 0.13
CAPN1-219ENST00000530495 STAU1O95793 577 aaKnown RBP15.88■□□□□ 0.13
CAPN1-219ENST00000530495 ADH1CP00326 375 aa15.88■□□□□ 0.13
CAPN1-219ENST00000530495 DLATP10515 647 aaKnown RBP15.88■□□□□ 0.13
CAPN1-219ENST00000530495 YWHAQP27348 245 aa15.88■□□□□ 0.13
CAPN1-219ENST00000530495 TIE1P35590 1138 aa15.88■□□□□ 0.13
CAPN1-219ENST00000530495 GRIA2P42262 883 aa15.88■□□□□ 0.13
CAPN1-219ENST00000530495 SNRPFP62306 86 aaKnown RBP15.88■□□□□ 0.13
CAPN1-219ENST00000530495 E2F4Q16254 413 aa15.88■□□□□ 0.13
CAPN1-219ENST00000530495 SPDYCQ5MJ68 293 aa15.88■□□□□ 0.13
CAPN1-219ENST00000530495 EOGTQ5NDL2 527 aa15.88■□□□□ 0.13
CAPN1-219ENST00000530495 CNNM4Q6P4Q7 775 aa15.88■□□□□ 0.13
CAPN1-219ENST00000530495 LPCAT2Q7L5N7 544 aa15.88■□□□□ 0.13
CAPN1-219ENST00000530495 C12orf40Q86WS4 652 aa15.88■□□□□ 0.13
CAPN1-219ENST00000530495 TTC30AQ86WT1 665 aa15.88■□□□□ 0.13
CAPN1-219ENST00000530495 NUP93Q8N1F7 819 aa15.88■□□□□ 0.13
CAPN1-219ENST00000530495 WHAMMQ8TF30 809 aa15.88■□□□□ 0.13
CAPN1-219ENST00000530495 RLN3Q8WXF3 142 aa15.88■□□□□ 0.13
CAPN1-219ENST00000530495 OVCA2Q8WZ82 227 aa15.88■□□□□ 0.13
CAPN1-219ENST00000530495 ZNF516Q92618 1163 aa15.88■□□□□ 0.13
CAPN1-219ENST00000530495 OTUB2Q96DC9 234 aa15.88■□□□□ 0.13
CAPN1-219ENST00000530495 FNBP1Q96RU3 617 aa15.88■□□□□ 0.13
CAPN1-219ENST00000530495 TRIM9Q9C026 710 aa15.88■□□□□ 0.13
CAPN1-219ENST00000530495 ZNF518BQ9C0D4 1074 aa15.88■□□□□ 0.13
CAPN1-219ENST00000530495 DPEP3Q9H4B8 488 aa15.88■□□□□ 0.13
CAPN1-219ENST00000530495 POLMQ9NP87 494 aaPredicted RBP15.88■□□□□ 0.13
CAPN1-219ENST00000530495 AGPAT3Q9NRZ7 376 aa15.88■□□□□ 0.13
CAPN1-219ENST00000530495 FRYQ5TBA9 3013 aa15.88■□□□□ 0.13
CAPN1-219ENST00000530495 PLXND1Q9Y4D7 1925 aa15.88■□□□□ 0.13
CAPN1-219ENST00000530495 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa15.87■□□□□ 0.13
CAPN1-219ENST00000530495 PALM2-AKAP2B1ALY0 433 aaPredicted RBP15.87■□□□□ 0.13
CAPN1-219ENST00000530495 C1QTNF9BB2RNN3 333 aa15.87■□□□□ 0.13
CAPN1-219ENST00000530495 CLDN5O00501 218 aa15.87■□□□□ 0.13
CAPN1-219ENST00000530495 SCAMP3O14828 347 aaKnown RBP15.87■□□□□ 0.13
CAPN1-219ENST00000530495 MAP3K13O43283 966 aa15.87■□□□□ 0.13
CAPN1-219ENST00000530495 ADAM23O75077 832 aa15.87■□□□□ 0.13
CAPN1-219ENST00000530495 RTN3O95197 1032 aaPredicted RBP15.87■□□□□ 0.13
CAPN1-219ENST00000530495 C1QTNF9P0C862 333 aa15.87■□□□□ 0.13
CAPN1-219ENST00000530495 MBL2P11226 248 aaPredicted RBP15.87■□□□□ 0.13
CAPN1-219ENST00000530495 ADH5P11766 374 aa15.87■□□□□ 0.13
CAPN1-219ENST00000530495 NASPP49321 788 aaPredicted RBP15.87■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms