RNA–Protein interactions for RNA: ENST00000529745.5

CCDC90B-215, Transcript of coiled-coil domain containing 90B, humanhuman

TSL 3

Gene CCDC90B, Length 1,053 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC90B-215ENST00000529745 ISM2Q6H9L7 571 aa16.41■□□□□ 0.22
CCDC90B-215ENST00000529745 ACOT1Q86TX2 421 aa16.41■□□□□ 0.22
CCDC90B-215ENST00000529745 NUP93Q8N1F7 819 aa16.41■□□□□ 0.22
CCDC90B-215ENST00000529745 KIAA1958Q8N8K9 716 aa16.41■□□□□ 0.22
CCDC90B-215ENST00000529745 WHAMMQ8TF30 809 aa16.41■□□□□ 0.22
CCDC90B-215ENST00000529745 NT5C1AQ9BXI3 368 aa16.41■□□□□ 0.22
CCDC90B-215ENST00000529745 DMAP1Q9NPF5 467 aaPredicted RBP16.41■□□□□ 0.22
CCDC90B-215ENST00000529745 HMGXB4Q9UGU5 601 aa16.41■□□□□ 0.22
CCDC90B-215ENST00000529745 ACACBO00763 2458 aa16.41■□□□□ 0.22
CCDC90B-215ENST00000529745 F5P12259 2224 aa16.4■□□□□ 0.22
CCDC90B-215ENST00000529745 TRAV19A0A0A6YYK7 116 aa16.4■□□□□ 0.22
CCDC90B-215ENST00000529745 NCAM2O15394 837 aa16.4■□□□□ 0.22
CCDC90B-215ENST00000529745 USP17L7P0C7H9 530 aa16.4■□□□□ 0.22
CCDC90B-215ENST00000529745 TARSP26639 723 aaKnown RBP16.4■□□□□ 0.22
CCDC90B-215ENST00000529745 SNX30Q5VWJ9 437 aa16.4■□□□□ 0.22
CCDC90B-215ENST00000529745 PDZD8Q8NEN9 1154 aa16.4■□□□□ 0.22
CCDC90B-215ENST00000529745 ZMIZ2Q8NF64 920 aa16.4■□□□□ 0.22
CCDC90B-215ENST00000529745 CSGALNACT1Q8TDX6 532 aa16.4■□□□□ 0.22
CCDC90B-215ENST00000529745 NELFBQ8WX92 580 aa16.4■□□□□ 0.22
CCDC90B-215ENST00000529745 TWNKQ96RR1 684 aa16.4■□□□□ 0.22
CCDC90B-215ENST00000529745 HNRNPABQ99729 332 aaKnown RBP16.4■□□□□ 0.22
CCDC90B-215ENST00000529745 FAM83CQ9BQN1 747 aa16.4■□□□□ 0.22
CCDC90B-215ENST00000529745 IER2Q9BTL4 223 aa16.4■□□□□ 0.22
CCDC90B-215ENST00000529745 DNAI2Q9GZS0 605 aa16.4■□□□□ 0.22
CCDC90B-215ENST00000529745 MMRN2Q9H8L6 949 aa16.4■□□□□ 0.22
CCDC90B-215ENST00000529745 PNPLA8Q9NP80 782 aa16.4■□□□□ 0.22
CCDC90B-215ENST00000529745 THG1LQ9NWX6 298 aaKnown RBP16.4■□□□□ 0.22
CCDC90B-215ENST00000529745 TRPM5Q9NZQ8 1165 aa16.4■□□□□ 0.22
CCDC90B-215ENST00000529745 CCL26Q9Y258 94 aa16.4■□□□□ 0.22
CCDC90B-215ENST00000529745 ZNF840PA6NDX5 716 aa16.39■□□□□ 0.21
CCDC90B-215ENST00000529745 FAM170BA6NMN3 283 aa16.39■□□□□ 0.21
CCDC90B-215ENST00000529745 P4HA2O15460 535 aa16.39■□□□□ 0.21
CCDC90B-215ENST00000529745 CLSTN1O94985 981 aa16.39■□□□□ 0.21
CCDC90B-215ENST00000529745 GNA14O95837 355 aa16.39■□□□□ 0.21
CCDC90B-215ENST00000529745 DCNP07585 359 aaKnown RBP16.39■□□□□ 0.21
CCDC90B-215ENST00000529745 PAK1Q13153 545 aa16.39■□□□□ 0.21
CCDC90B-215ENST00000529745 ZNF77Q15935 545 aa16.39■□□□□ 0.21
CCDC90B-215ENST00000529745 DCAF17Q5H9S7 520 aaPredicted RBP16.39■□□□□ 0.21
CCDC90B-215ENST00000529745 TCERG1LQ5VWI1 586 aa16.39■□□□□ 0.21
CCDC90B-215ENST00000529745 MAMSTRQ6ZN01 415 aa16.39■□□□□ 0.21
CCDC90B-215ENST00000529745 DGLUCYQ7Z3D6 616 aa16.39■□□□□ 0.21
CCDC90B-215ENST00000529745 RALGPS2Q86X27 583 aaPredicted RBP16.39■□□□□ 0.21
CCDC90B-215ENST00000529745 RMDN1Q96DB5 314 aa16.39■□□□□ 0.21
CCDC90B-215ENST00000529745 CNTNAP3BQ96NU0 1288 aa16.39■□□□□ 0.21
CCDC90B-215ENST00000529745 SLITRK1Q96PX8 696 aa16.39■□□□□ 0.21
CCDC90B-215ENST00000529745 SLC22A12Q96S37 553 aa16.39■□□□□ 0.21
CCDC90B-215ENST00000529745 KCNK16Q96T55 309 aa16.39■□□□□ 0.21
CCDC90B-215ENST00000529745 SMOQ99835 787 aa16.39■□□□□ 0.21
CCDC90B-215ENST00000529745 CNTNAP3Q9BZ76 1288 aa16.39■□□□□ 0.21
CCDC90B-215ENST00000529745 ARHGAP26Q9UNA1 814 aa16.39■□□□□ 0.21
CCDC90B-215ENST00000529745 MTF2Q9Y483 593 aaPredicted RBP16.39■□□□□ 0.21
CCDC90B-215ENST00000529745 PIAS3Q9Y6X2 628 aa16.39■□□□□ 0.21
CCDC90B-215ENST00000529745 KIAA1549LQ6ZVL6 1849 aa16.38■□□□□ 0.21
CCDC90B-215ENST00000529745 BIN1O00499 593 aa16.38■□□□□ 0.21
CCDC90B-215ENST00000529745 AP1G2O75843 785 aa16.38■□□□□ 0.21
CCDC90B-215ENST00000529745 OAS1P00973 400 aaKnown RBP16.38■□□□□ 0.21
CCDC90B-215ENST00000529745 ZDHHC11BP0C7U3 371 aa16.38■□□□□ 0.21
CCDC90B-215ENST00000529745 CCDC130P13994 396 aa16.38■□□□□ 0.21
CCDC90B-215ENST00000529745 CD72P21854 359 aa16.38■□□□□ 0.21
CCDC90B-215ENST00000529745 YWHAQP27348 245 aa16.38■□□□□ 0.21
CCDC90B-215ENST00000529745 FMO5P49326 533 aa16.38■□□□□ 0.21
CCDC90B-215ENST00000529745 SLC7A9P82251 487 aa16.38■□□□□ 0.21
CCDC90B-215ENST00000529745 TAF10Q12962 218 aa16.38■□□□□ 0.21
CCDC90B-215ENST00000529745 UBXN2BQ14CS0 331 aa16.38■□□□□ 0.21
CCDC90B-215ENST00000529745 ANGPT1Q15389 498 aa16.38■□□□□ 0.21
CCDC90B-215ENST00000529745 WDR44Q5JSH3 913 aa16.38■□□□□ 0.21
CCDC90B-215ENST00000529745 TRIM59Q8IWR1 403 aa16.38■□□□□ 0.21
CCDC90B-215ENST00000529745 C12orf29Q8N999 325 aa16.38■□□□□ 0.21
CCDC90B-215ENST00000529745 RIN3Q8TB24 985 aa16.38■□□□□ 0.21
CCDC90B-215ENST00000529745 SLC2A14Q8TDB8 520 aa16.38■□□□□ 0.21
CCDC90B-215ENST00000529745 CYFIP2Q96F07 1278 aa16.38■□□□□ 0.21
CCDC90B-215ENST00000529745 MED10Q9BTT4 135 aa16.38■□□□□ 0.21
CCDC90B-215ENST00000529745 SMG9Q9H0W8 520 aaKnown RBP16.38■□□□□ 0.21
CCDC90B-215ENST00000529745 KRT82Q9NSB4 513 aa16.38■□□□□ 0.21
CCDC90B-215ENST00000529745 CTNND2Q9UQB3 1225 aa16.38■□□□□ 0.21
CCDC90B-215ENST00000529745 CACNA1IQ9P0X4 2223 aa16.38■□□□□ 0.21
CCDC90B-215ENST00000529745 C2orf78A6NCI8 922 aa16.37■□□□□ 0.21
CCDC90B-215ENST00000529745 CKMP06732 381 aa16.37■□□□□ 0.21
CCDC90B-215ENST00000529745 HDCP19113 662 aa16.37■□□□□ 0.21
CCDC90B-215ENST00000529745 CTHP32929 405 aa16.37■□□□□ 0.21
CCDC90B-215ENST00000529745 TUBP50607 506 aa16.37■□□□□ 0.21
CCDC90B-215ENST00000529745 SLC5A3P53794 718 aa16.37■□□□□ 0.21
CCDC90B-215ENST00000529745 PDGFRLQ15198 375 aa16.37■□□□□ 0.21
CCDC90B-215ENST00000529745 KLHL10Q6JEL2 608 aa16.37■□□□□ 0.21
CCDC90B-215ENST00000529745 CLEC20AQ6ZU45 233 aa16.37■□□□□ 0.21
CCDC90B-215ENST00000529745 GPIHBP1Q8IV16 184 aa16.37■□□□□ 0.21
CCDC90B-215ENST00000529745 C1orf210Q8IVY1 113 aa16.37■□□□□ 0.21
CCDC90B-215ENST00000529745 UBR7Q8N806 425 aa16.37■□□□□ 0.21
CCDC90B-215ENST00000529745 ARL14EPQ8N8R7 260 aaPredicted RBP16.37■□□□□ 0.21
CCDC90B-215ENST00000529745 FAM3CQ92520 227 aa16.37■□□□□ 0.21
CCDC90B-215ENST00000529745 TATDN2Q93075 761 aa16.37■□□□□ 0.21
CCDC90B-215ENST00000529745 CLSTN2Q9H4D0 955 aa16.37■□□□□ 0.21
CCDC90B-215ENST00000529745 HPS4Q9NQG7 708 aa16.37■□□□□ 0.21
CCDC90B-215ENST00000529745 GKN1Q9NS71 199 aa16.37■□□□□ 0.21
CCDC90B-215ENST00000529745 CISHQ9NSE2 258 aa16.37■□□□□ 0.21
CCDC90B-215ENST00000529745 RWDD2AQ9UIY3 292 aa16.37■□□□□ 0.21
CCDC90B-215ENST00000529745 CHD6Q8TD26 2715 aa16.36■□□□□ 0.21
CCDC90B-215ENST00000529745 HHLA1C9JL84 531 aa16.36■□□□□ 0.21
CCDC90B-215ENST00000529745 SPECC1L-ADORA2AF8WAN1 911 aa16.36■□□□□ 0.21
CCDC90B-215ENST00000529745 BEST1O76090 585 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms