RNA–Protein interactions for RNA: ENST00000529506.5

CMTM1-213, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CMTM1, Length 581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-213ENST00000529506 MED10Q9BTT4 135 aa18.86■□□□□ 0.61
CMTM1-213ENST00000529506 IMPG2Q9BZV3 1241 aa18.86■□□□□ 0.61
CMTM1-213ENST00000529506 GTF3C3Q9Y5Q9 886 aa18.86■□□□□ 0.61
CMTM1-213ENST00000529506 PTPRDP23468 1912 aa18.86■□□□□ 0.61
CMTM1-213ENST00000529506 OTOL1A6NHN0 477 aaPredicted RBP18.85■□□□□ 0.61
CMTM1-213ENST00000529506 FOXD2O60548 495 aaPredicted RBP18.85■□□□□ 0.61
CMTM1-213ENST00000529506 VAMP7P51809 220 aa18.85■□□□□ 0.61
CMTM1-213ENST00000529506 CDH8P55286 799 aa18.85■□□□□ 0.61
CMTM1-213ENST00000529506 USP46P62068 366 aa18.85■□□□□ 0.61
CMTM1-213ENST00000529506 LMNB2Q03252 620 aa18.85■□□□□ 0.61
CMTM1-213ENST00000529506 EML3Q32P44 896 aa18.85■□□□□ 0.61
CMTM1-213ENST00000529506 SV2AQ7L0J3 742 aa18.85■□□□□ 0.61
CMTM1-213ENST00000529506 WDR5BQ86VZ2 330 aa18.85■□□□□ 0.61
CMTM1-213ENST00000529506 GUF1Q8N442 669 aaKnown RBP18.85■□□□□ 0.61
CMTM1-213ENST00000529506 CCDC150Q8NCX0 1101 aa18.85■□□□□ 0.61
CMTM1-213ENST00000529506 SMARCD1Q96GM5 515 aa18.85■□□□□ 0.61
CMTM1-213ENST00000529506 ZNF518BQ9C0D4 1074 aa18.85■□□□□ 0.61
CMTM1-213ENST00000529506 DPEP3Q9H4B8 488 aa18.85■□□□□ 0.61
CMTM1-213ENST00000529506 NME7Q9Y5B8 376 aa18.85■□□□□ 0.61
CMTM1-213ENST00000529506 WNT6Q9Y6F9 365 aa18.85■□□□□ 0.61
CMTM1-213ENST00000529506 ATG2BQ96BY7 2078 aa18.85■□□□□ 0.61
CMTM1-213ENST00000529506 LEFTY2O00292 366 aa18.84■□□□□ 0.61
CMTM1-213ENST00000529506 HRO43593 1189 aa18.84■□□□□ 0.61
CMTM1-213ENST00000529506 ZNF202O95125 648 aa18.84■□□□□ 0.61
CMTM1-213ENST00000529506 VNN1O95497 513 aa18.84■□□□□ 0.61
CMTM1-213ENST00000529506 PSMC2P35998 433 aaKnown RBP18.84■□□□□ 0.61
CMTM1-213ENST00000529506 DPYDQ12882 1025 aa18.84■□□□□ 0.61
CMTM1-213ENST00000529506 ADAM9Q13443 819 aa18.84■□□□□ 0.61
CMTM1-213ENST00000529506 BECN1Q14457 450 aa18.84■□□□□ 0.61
CMTM1-213ENST00000529506 WDR44Q5JSH3 913 aa18.84■□□□□ 0.61
CMTM1-213ENST00000529506 HEATR6Q6AI08 1181 aaKnown RBP18.84■□□□□ 0.61
CMTM1-213ENST00000529506 CEP68Q76N32 757 aa18.84■□□□□ 0.61
CMTM1-213ENST00000529506 CRYBG2Q8N1P7 616 aa18.84■□□□□ 0.61
CMTM1-213ENST00000529506 SMYD3Q9H7B4 428 aa18.84■□□□□ 0.61
CMTM1-213ENST00000529506 DMAP1Q9NPF5 467 aaPredicted RBP18.84■□□□□ 0.61
CMTM1-213ENST00000529506 TBC1D14Q9P2M4 693 aa18.84■□□□□ 0.61
CMTM1-213ENST00000529506 CEP250Q9BV73 2442 aa18.83■□□□□ 0.61
CMTM1-213ENST00000529506 GOLGA6L4A6NEF3 574 aa18.83■□□□□ 0.6
CMTM1-213ENST00000529506 CLDN5O00501 218 aa18.83■□□□□ 0.6
CMTM1-213ENST00000529506 ASS1P00966 412 aaKnown RBP18.83■□□□□ 0.6
CMTM1-213ENST00000529506 NR2F2P24468 414 aa18.83■□□□□ 0.6
CMTM1-213ENST00000529506 DLG4P78352 724 aa18.83■□□□□ 0.6
CMTM1-213ENST00000529506 RIN3Q8TB24 985 aa18.83■□□□□ 0.6
CMTM1-213ENST00000529506 FBXO32Q969P5 355 aa18.83■□□□□ 0.6
CMTM1-213ENST00000529506 RMDN1Q96DB5 314 aa18.83■□□□□ 0.6
CMTM1-213ENST00000529506 RNF38Q9H0F5 515 aa18.83■□□□□ 0.6
CMTM1-213ENST00000529506 LINC00597Q9H2U6 94 aa18.83■□□□□ 0.6
CMTM1-213ENST00000529506 CYP3A43Q9HB55 503 aa18.83■□□□□ 0.6
CMTM1-213ENST00000529506 USP18Q9UMW8 372 aa18.83■□□□□ 0.6
CMTM1-213ENST00000529506 RNF40O75150 1001 aa18.82■□□□□ 0.6
CMTM1-213ENST00000529506 OLFM2O95897 454 aa18.82■□□□□ 0.6
CMTM1-213ENST00000529506 OAS1P00973 400 aaKnown RBP18.82■□□□□ 0.6
CMTM1-213ENST00000529506 EGFP01133 1207 aa18.82■□□□□ 0.6
CMTM1-213ENST00000529506 GTF2H1P32780 548 aa18.82■□□□□ 0.6
CMTM1-213ENST00000529506 PIK3CAP42336 1068 aa18.82■□□□□ 0.6
CMTM1-213ENST00000529506 HECTD3Q5T447 861 aa18.82■□□□□ 0.6
CMTM1-213ENST00000529506 SNX30Q5VWJ9 437 aa18.82■□□□□ 0.6
CMTM1-213ENST00000529506 DGLUCYQ7Z3D6 616 aa18.82■□□□□ 0.6
CMTM1-213ENST00000529506 ACOT1Q86TX2 421 aa18.82■□□□□ 0.6
CMTM1-213ENST00000529506 FAM35AQ86V20 835 aa18.82■□□□□ 0.6
CMTM1-213ENST00000529506 ADGRG2Q8IZP9 1017 aa18.82■□□□□ 0.6
CMTM1-213ENST00000529506 ACDQ96AP0 544 aa18.82■□□□□ 0.6
CMTM1-213ENST00000529506 CHFRQ96EP1 664 aa18.82■□□□□ 0.6
CMTM1-213ENST00000529506 KCNK16Q96T55 309 aa18.82■□□□□ 0.6
CMTM1-213ENST00000529506 GTPBP4Q9BZE4 634 aaKnown RBP18.82■□□□□ 0.6
CMTM1-213ENST00000529506 FBXO44Q9H4M3 255 aa18.82■□□□□ 0.6
CMTM1-213ENST00000529506 RMND1Q9NWS8 449 aa18.82■□□□□ 0.6
CMTM1-213ENST00000529506 IL37Q9NZH6 218 aa18.82■□□□□ 0.6
CMTM1-213ENST00000529506 CPQQ9Y646 472 aa18.82■□□□□ 0.6
CMTM1-213ENST00000529506 MYH10P35580 1976 aa18.81■□□□□ 0.6
CMTM1-213ENST00000529506 STX10O60499 249 aa18.81■□□□□ 0.6
CMTM1-213ENST00000529506 AP1G2O75843 785 aa18.81■□□□□ 0.6
CMTM1-213ENST00000529506 HLA-DRAP01903 254 aa18.81■□□□□ 0.6
CMTM1-213ENST00000529506 MBL2P11226 248 aaPredicted RBP18.81■□□□□ 0.6
CMTM1-213ENST00000529506 RAP1GAPP47736 663 aa18.81■□□□□ 0.6
CMTM1-213ENST00000529506 TUBP50607 506 aa18.81■□□□□ 0.6
CMTM1-213ENST00000529506 NDST1P52848 882 aa18.81■□□□□ 0.6
CMTM1-213ENST00000529506 IFRD2Q12894 506 aaPredicted RBP18.81■□□□□ 0.6
CMTM1-213ENST00000529506 SCARA5Q6ZMJ2 495 aa18.81■□□□□ 0.6
CMTM1-213ENST00000529506 SYT13Q7L8C5 426 aa18.81■□□□□ 0.6
CMTM1-213ENST00000529506 ARHGAP30Q7Z6I6 1101 aaPredicted RBP18.81■□□□□ 0.6
CMTM1-213ENST00000529506 FAM186BQ8IYM0 893 aa18.81■□□□□ 0.6
CMTM1-213ENST00000529506 TTC39CQ8N584 583 aa18.81■□□□□ 0.6
CMTM1-213ENST00000529506 OTUB2Q96DC9 234 aa18.81■□□□□ 0.6
CMTM1-213ENST00000529506 FAXDC2Q96IV6 333 aa18.81■□□□□ 0.6
CMTM1-213ENST00000529506 LOXL4Q96JB6 756 aa18.81■□□□□ 0.6
CMTM1-213ENST00000529506 FBRSL1Q9HCM7 1045 aaKnown RBP18.81■□□□□ 0.6
CMTM1-213ENST00000529506 DLL3Q9NYJ7 618 aa18.81■□□□□ 0.6
CMTM1-213ENST00000529506 CHORDC1Q9UHD1 332 aaPredicted RBP18.81■□□□□ 0.6
CMTM1-213ENST00000529506 RALGAPA1Q6GYQ0 2036 aa18.81■□□□□ 0.6
CMTM1-213ENST00000529506 E2F8A0AVK6 867 aa18.8■□□□□ 0.6
CMTM1-213ENST00000529506 AKAP3O75969 853 aa18.8■□□□□ 0.6
CMTM1-213ENST00000529506 PRR29P0C7W0 189 aa18.8■□□□□ 0.6
CMTM1-213ENST00000529506 CACNA2D1P54289 1103 aa18.8■□□□□ 0.6
CMTM1-213ENST00000529506 NUCB2P80303 420 aa18.8■□□□□ 0.6
CMTM1-213ENST00000529506 DMWDQ09019 674 aa18.8■□□□□ 0.6
CMTM1-213ENST00000529506 LPAL2Q16609 132 aa18.8■□□□□ 0.6
CMTM1-213ENST00000529506 RSPO4Q2I0M5 234 aaPredicted RBP18.8■□□□□ 0.6
CMTM1-213ENST00000529506 EDRF1Q3B7T1 1238 aa18.8■□□□□ 0.6
CMTM1-213ENST00000529506 PREPLQ4J6C6 727 aaPredicted RBP18.8■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms