RNA–Protein interactions for RNA: ENST00000528965.1

CTSB-215, Transcript of cathepsin B, humanhuman

TSL 3

Gene CTSB, Length 556 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-215ENST00000528965 USP39Q53GS9 565 aaKnown RBP16.63■□□□□ 0.25
CTSB-215ENST00000528965 PLA2G2CQ5R387 149 aa16.63■□□□□ 0.25
CTSB-215ENST00000528965 FILIP1Q7Z7B0 1213 aa16.63■□□□□ 0.25
CTSB-215ENST00000528965 CEP57L1Q8IYX8 460 aa16.63■□□□□ 0.25
CTSB-215ENST00000528965 B3GALNT2Q8NCR0 500 aa16.63■□□□□ 0.25
CTSB-215ENST00000528965 OVCA2Q8WZ82 227 aa16.63■□□□□ 0.25
CTSB-215ENST00000528965 EZH1Q92800 747 aaPredicted RBP16.63■□□□□ 0.25
CTSB-215ENST00000528965 LINC00597Q9H2U6 94 aa16.63■□□□□ 0.25
CTSB-215ENST00000528965 TBC1D14Q9P2M4 693 aa16.63■□□□□ 0.25
CTSB-215ENST00000528965 NXF1Q9UBU9 619 aaKnown RBP16.63■□□□□ 0.25
CTSB-215ENST00000528965 CPQQ9Y646 472 aa16.63■□□□□ 0.25
CTSB-215ENST00000528965 EPG5Q9HCE0 2579 aa16.63■□□□□ 0.25
CTSB-215ENST00000528965 PTPRDP23468 1912 aa16.62■□□□□ 0.25
CTSB-215ENST00000528965 ANAPC1Q9H1A4 1944 aa16.62■□□□□ 0.25
CTSB-215ENST00000528965 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.62■□□□□ 0.25
CTSB-215ENST00000528965 ALDH1A2O94788 518 aa16.62■□□□□ 0.25
CTSB-215ENST00000528965 CST3P01034 146 aaPredicted RBP16.62■□□□□ 0.25
CTSB-215ENST00000528965 CYP17A1P05093 508 aa16.62■□□□□ 0.25
CTSB-215ENST00000528965 MBL2P11226 248 aaPredicted RBP16.62■□□□□ 0.25
CTSB-215ENST00000528965 TRIM21P19474 475 aaKnown RBP16.62■□□□□ 0.25
CTSB-215ENST00000528965 YWHAQP27348 245 aa16.62■□□□□ 0.25
CTSB-215ENST00000528965 GBP1P32455 592 aa16.62■□□□□ 0.25
CTSB-215ENST00000528965 OPRD1P41143 372 aa16.62■□□□□ 0.25
CTSB-215ENST00000528965 EIF2DP41214 584 aaKnown RBP16.62■□□□□ 0.25
CTSB-215ENST00000528965 SEC13P55735 322 aa16.62■□□□□ 0.25
CTSB-215ENST00000528965 MYL6P60660 151 aa16.62■□□□□ 0.25
CTSB-215ENST00000528965 EHHADHQ08426 723 aa16.62■□□□□ 0.25
CTSB-215ENST00000528965 TAF10Q12962 218 aa16.62■□□□□ 0.25
CTSB-215ENST00000528965 CCDC6Q16204 474 aa16.62■□□□□ 0.25
CTSB-215ENST00000528965 KNOP1Q1ED39 458 aaKnown RBP16.62■□□□□ 0.25
CTSB-215ENST00000528965 HSF5Q4G112 596 aaPredicted RBP16.62■□□□□ 0.25
CTSB-215ENST00000528965 ZNF667Q5HYK9 610 aa16.62■□□□□ 0.25
CTSB-215ENST00000528965 STPG1Q5TH74 334 aa16.62■□□□□ 0.25
CTSB-215ENST00000528965 NUP93Q8N1F7 819 aa16.62■□□□□ 0.25
CTSB-215ENST00000528965 USP33Q8TEY7 942 aa16.62■□□□□ 0.25
CTSB-215ENST00000528965 FBXO32Q969P5 355 aa16.62■□□□□ 0.25
CTSB-215ENST00000528965 TNIP3Q96KP6 325 aa16.62■□□□□ 0.25
CTSB-215ENST00000528965 ZNF518BQ9C0D4 1074 aa16.62■□□□□ 0.25
CTSB-215ENST00000528965 DUSP15Q9H1R2 295 aaPredicted RBP16.62■□□□□ 0.25
CTSB-215ENST00000528965 DPEP3Q9H4B8 488 aa16.62■□□□□ 0.25
CTSB-215ENST00000528965 SLC39A2Q9NP94 309 aa16.62■□□□□ 0.25
CTSB-215ENST00000528965 SMPD4Q9NXE4 827 aa16.62■□□□□ 0.25
CTSB-215ENST00000528965 CFAP97Q9P2B7 532 aa16.62■□□□□ 0.25
CTSB-215ENST00000528965 CACNA1BQ00975 2339 aa16.62■□□□□ 0.25
CTSB-215ENST00000528965 APODP05090 189 aa16.61■□□□□ 0.25
CTSB-215ENST00000528965 P4HA1P13674 534 aa16.61■□□□□ 0.25
CTSB-215ENST00000528965 MRPS21P82921 87 aaKnown RBP16.61■□□□□ 0.25
CTSB-215ENST00000528965 CREB5Q02930 508 aa16.61■□□□□ 0.25
CTSB-215ENST00000528965 C2orf27AQ580R0 203 aa16.61■□□□□ 0.25
CTSB-215ENST00000528965 RNF43Q68DV7 783 aa16.61■□□□□ 0.25
CTSB-215ENST00000528965 ATL3Q6DD88 541 aa16.61■□□□□ 0.25
CTSB-215ENST00000528965 SMARCD1Q96GM5 515 aa16.61■□□□□ 0.25
CTSB-215ENST00000528965 CNOT6LQ96LI5 555 aaKnown RBP16.61■□□□□ 0.25
CTSB-215ENST00000528965 MED10Q9BTT4 135 aa16.61■□□□□ 0.25
CTSB-215ENST00000528965 XYLT2Q9H1B5 865 aa16.61■□□□□ 0.25
CTSB-215ENST00000528965 BLZF1Q9H2G9 400 aa16.61■□□□□ 0.25
CTSB-215ENST00000528965 VRTNQ9H8Y1 702 aa16.61■□□□□ 0.25
CTSB-215ENST00000528965 DMAP1Q9NPF5 467 aaPredicted RBP16.61■□□□□ 0.25
CTSB-215ENST00000528965 EXOC1Q9NV70 894 aa16.61■□□□□ 0.25
CTSB-215ENST00000528965 POLR3BQ9NW08 1133 aaPredicted RBP16.61■□□□□ 0.25
CTSB-215ENST00000528965 MMP17Q9ULZ9 603 aa16.61■□□□□ 0.25
CTSB-215ENST00000528965 SDK1Q7Z5N4 2213 aa16.6■□□□□ 0.25
CTSB-215ENST00000528965 F13A1P00488 732 aa16.6■□□□□ 0.25
CTSB-215ENST00000528965 ZSCAN22P10073 491 aaPredicted RBP16.6■□□□□ 0.25
CTSB-215ENST00000528965 ADH5P11766 374 aa16.6■□□□□ 0.25
CTSB-215ENST00000528965 AFMP43652 599 aa16.6■□□□□ 0.25
CTSB-215ENST00000528965 TUBP50607 506 aa16.6■□□□□ 0.25
CTSB-215ENST00000528965 DHCR24Q15392 516 aa16.6■□□□□ 0.25
CTSB-215ENST00000528965 PREPLQ4J6C6 727 aaPredicted RBP16.6■□□□□ 0.25
CTSB-215ENST00000528965 FOXD4L5Q5VV16 416 aaPredicted RBP16.6■□□□□ 0.25
CTSB-215ENST00000528965 RESP18Q5W5W9 173 aa16.6■□□□□ 0.25
CTSB-215ENST00000528965 ANO7Q6IWH7 933 aa16.6■□□□□ 0.25
CTSB-215ENST00000528965 FAM35AQ86V20 835 aa16.6■□□□□ 0.25
CTSB-215ENST00000528965 FOXD4L4Q8WXT5 416 aaPredicted RBP16.6■□□□□ 0.25
CTSB-215ENST00000528965 SNX21Q969T3 373 aa16.6■□□□□ 0.25
CTSB-215ENST00000528965 OTUB2Q96DC9 234 aa16.6■□□□□ 0.25
CTSB-215ENST00000528965 SPACA7Q96KW9 195 aa16.6■□□□□ 0.25
CTSB-215ENST00000528965 PNKPQ96T60 521 aa16.6■□□□□ 0.25
CTSB-215ENST00000528965 EDEM2Q9BV94 578 aa16.6■□□□□ 0.25
CTSB-215ENST00000528965 B3GNT5Q9BYG0 378 aa16.6■□□□□ 0.25
CTSB-215ENST00000528965 NACA2Q9H009 215 aa16.6■□□□□ 0.25
CTSB-215ENST00000528965 RNF38Q9H0F5 515 aa16.6■□□□□ 0.25
CTSB-215ENST00000528965 SMYD3Q9H7B4 428 aa16.6■□□□□ 0.25
CTSB-215ENST00000528965 COMMD8Q9NX08 183 aa16.6■□□□□ 0.25
CTSB-215ENST00000528965 CFAP45Q9UL16 551 aa16.6■□□□□ 0.25
CTSB-215ENST00000528965 KIAA1549LQ6ZVL6 1849 aa16.6■□□□□ 0.25
CTSB-215ENST00000528965 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.59■□□□□ 0.25
CTSB-215ENST00000528965 E2F8A0AVK6 867 aa16.59■□□□□ 0.25
CTSB-215ENST00000528965 BCLAF3A2AJT9 711 aaKnown RBP16.59■□□□□ 0.25
CTSB-215ENST00000528965 K7EQS6 105 aa16.59■□□□□ 0.25
CTSB-215ENST00000528965 CLDN5O00501 218 aa16.59■□□□□ 0.25
CTSB-215ENST00000528965 DCLK1O15075 740 aa16.59■□□□□ 0.25
CTSB-215ENST00000528965 CAVIN2O95810 425 aa16.59■□□□□ 0.25
CTSB-215ENST00000528965 CACNA2D1P54289 1103 aa16.59■□□□□ 0.25
CTSB-215ENST00000528965 ZXDBP98169 803 aa16.59■□□□□ 0.25
CTSB-215ENST00000528965 NCOA4Q13772 614 aa16.59■□□□□ 0.25
CTSB-215ENST00000528965 EOGTQ5NDL2 527 aa16.59■□□□□ 0.25
CTSB-215ENST00000528965 HECTD3Q5T447 861 aa16.59■□□□□ 0.25
CTSB-215ENST00000528965 BTBD8Q5XKL5 378 aa16.59■□□□□ 0.25
CTSB-215ENST00000528965 PMS2CLQ68D20 193 aa16.59■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms