RNA–Protein interactions for RNA: ENST00000528930.5

SSBP3-212, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best)

Gene SSBP3, Length 862 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-212ENST00000528930 A0A1B0GVL5 298 aa9.13□□□□□ -0.95
SSBP3-212ENST00000528930 ERVH48-1M5A8F1 160 aa9.13□□□□□ -0.95
SSBP3-212ENST00000528930 PPEF2O14830 753 aa9.13□□□□□ -0.95
SSBP3-212ENST00000528930 SYN3O14994 580 aa9.13□□□□□ -0.95
SSBP3-212ENST00000528930 TRAPPC3O43617 180 aa9.13□□□□□ -0.95
SSBP3-212ENST00000528930 EXTL3O43909 919 aa9.13□□□□□ -0.95
SSBP3-212ENST00000528930 NFICP08651 508 aa9.13□□□□□ -0.95
SSBP3-212ENST00000528930 POU2F2P09086 479 aa9.13□□□□□ -0.95
SSBP3-212ENST00000528930 HNRNPA1P09651 372 aaKnown RBP eCLIP9.13□□□□□ -0.95
SSBP3-212ENST00000528930 SLFN14P0C7P3 912 aa9.13□□□□□ -0.95
SSBP3-212ENST00000528930 PFKFB1P16118 471 aa9.13□□□□□ -0.95
SSBP3-212ENST00000528930 GARTP22102 1010 aa9.13□□□□□ -0.95
SSBP3-212ENST00000528930 OR1D2P34982 312 aa9.13□□□□□ -0.95
SSBP3-212ENST00000528930 AFMP43652 599 aa9.13□□□□□ -0.95
SSBP3-212ENST00000528930 GUCY2FP51841 1108 aa9.13□□□□□ -0.95
SSBP3-212ENST00000528930 ASIC1P78348 528 aa9.13□□□□□ -0.95
SSBP3-212ENST00000528930 CYP4F3Q08477 520 aa9.13□□□□□ -0.95
SSBP3-212ENST00000528930 LMAN2Q12907 356 aa9.13□□□□□ -0.95
SSBP3-212ENST00000528930 CBLBQ13191 982 aa9.13□□□□□ -0.95
SSBP3-212ENST00000528930 CUL4BQ13620 913 aa9.13□□□□□ -0.95
SSBP3-212ENST00000528930 ALCAMQ13740 583 aa9.13□□□□□ -0.95
SSBP3-212ENST00000528930 RAB33AQ14088 237 aa9.13□□□□□ -0.95
SSBP3-212ENST00000528930 POSTNQ15063 836 aa9.13□□□□□ -0.95
SSBP3-212ENST00000528930 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.13□□□□□ -0.95
SSBP3-212ENST00000528930 SPATA1Q5VX52 437 aa9.13□□□□□ -0.95
SSBP3-212ENST00000528930 TANGO2Q6ICL3 276 aa9.13□□□□□ -0.95
SSBP3-212ENST00000528930 JADE1Q6IE81 842 aa9.13□□□□□ -0.95
SSBP3-212ENST00000528930 C1orf228Q6PIY5 440 aa9.13□□□□□ -0.95
SSBP3-212ENST00000528930 UNC13DQ70J99 1090 aa9.13□□□□□ -0.95
SSBP3-212ENST00000528930 EPM2AIP1Q7L775 607 aaPredicted RBP9.13□□□□□ -0.95
SSBP3-212ENST00000528930 GRAMD1CQ8IYS0 662 aa9.13□□□□□ -0.95
SSBP3-212ENST00000528930 ZNF507Q8TCN5 953 aa9.13□□□□□ -0.95
SSBP3-212ENST00000528930 POMGNT1Q8WZA1 660 aa9.13□□□□□ -0.95
SSBP3-212ENST00000528930 SUSD3Q96L08 255 aa9.13□□□□□ -0.95
SSBP3-212ENST00000528930 BLZF1Q9H2G9 400 aa9.13□□□□□ -0.95
SSBP3-212ENST00000528930 ASB7Q9H672 318 aa9.13□□□□□ -0.95
SSBP3-212ENST00000528930 FBXW11Q9UKB1 542 aa9.13□□□□□ -0.95
SSBP3-212ENST00000528930 EXOC7Q9UPT5 735 aa9.13□□□□□ -0.95
SSBP3-212ENST00000528930 BACE2Q9Y5Z0 518 aa9.13□□□□□ -0.95
SSBP3-212ENST00000528930 GON4LQ3T8J9 2241 aa9.12□□□□□ -0.95
SSBP3-212ENST00000528930 USP9YO00507 2555 aaPredicted RBP9.12□□□□□ -0.95
SSBP3-212ENST00000528930 PVALEFA0A1B0GWK0 134 aa9.12□□□□□ -0.95
SSBP3-212ENST00000528930 ANO9A1A5B4 782 aa9.12□□□□□ -0.95
SSBP3-212ENST00000528930 M0QZQ0 153 aa9.12□□□□□ -0.95
SSBP3-212ENST00000528930 ARNTLO00327 626 aa9.12□□□□□ -0.95
SSBP3-212ENST00000528930 PIRO00625 290 aa9.12□□□□□ -0.95
SSBP3-212ENST00000528930 EIF3DO15371 548 aaKnown RBP eCLIP9.12□□□□□ -0.95
SSBP3-212ENST00000528930 SLC28A2O43868 658 aa9.12□□□□□ -0.95
SSBP3-212ENST00000528930 KLRC4O43908 158 aa9.12□□□□□ -0.95
SSBP3-212ENST00000528930 FTH1P19P0C7X4 201 aa9.12□□□□□ -0.95
SSBP3-212ENST00000528930 CCNE1P24864 410 aa9.12□□□□□ -0.95
SSBP3-212ENST00000528930 HOXA9P31269 272 aa9.12□□□□□ -0.95
SSBP3-212ENST00000528930 AARSP49588 968 aaKnown RBP eCLIP9.12□□□□□ -0.95
SSBP3-212ENST00000528930 CCINQ13939 588 aa9.12□□□□□ -0.95
SSBP3-212ENST00000528930 FAM26FQ5R3K3 315 aa9.12□□□□□ -0.95
SSBP3-212ENST00000528930 ZNF385CQ66K41 422 aaPredicted RBP9.12□□□□□ -0.95
SSBP3-212ENST00000528930 PMS2CLQ68D20 193 aa9.12□□□□□ -0.95
SSBP3-212ENST00000528930 ANKS3Q6ZW76 656 aa9.12□□□□□ -0.95
SSBP3-212ENST00000528930 GPR155Q7Z3F1 870 aa9.12□□□□□ -0.95
SSBP3-212ENST00000528930 EFCAB13Q8IY85 973 aa9.12□□□□□ -0.95
SSBP3-212ENST00000528930 SYCP3Q8IZU3 236 aa9.12□□□□□ -0.95
SSBP3-212ENST00000528930 SAAL1Q96ER3 474 aa9.12□□□□□ -0.95
SSBP3-212ENST00000528930 PAGE5Q96GU1 130 aa9.12□□□□□ -0.95
SSBP3-212ENST00000528930 PYM1Q9BRP8 204 aaKnown RBP9.12□□□□□ -0.95
SSBP3-212ENST00000528930 CBWD1Q9BRT8 395 aa9.12□□□□□ -0.95
SSBP3-212ENST00000528930 SEMA4CQ9C0C4 833 aa9.12□□□□□ -0.95
SSBP3-212ENST00000528930 SCAND2PQ9GZW5 306 aaPredicted RBP9.12□□□□□ -0.95
SSBP3-212ENST00000528930 TMEM206Q9H813 350 aa9.12□□□□□ -0.95
SSBP3-212ENST00000528930 GDPD2Q9HCC8 539 aa9.12□□□□□ -0.95
SSBP3-212ENST00000528930 GDE1Q9NZC3 331 aa9.12□□□□□ -0.95
SSBP3-212ENST00000528930 IL17BQ9UHF5 180 aa9.12□□□□□ -0.95
SSBP3-212ENST00000528930 DERAQ9Y315 318 aa9.12□□□□□ -0.95
SSBP3-212ENST00000528930 C2CD2Q9Y426 696 aa9.12□□□□□ -0.95
SSBP3-212ENST00000528930 NUB1Q9Y5A7 615 aa9.12□□□□□ -0.95
SSBP3-212ENST00000528930 ATP6V1DQ9Y5K8 247 aa9.12□□□□□ -0.95
SSBP3-212ENST00000528930 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.12□□□□□ -0.95
SSBP3-212ENST00000528930 CDY1Q9Y6F8 540 aa9.12□□□□□ -0.95
SSBP3-212ENST00000528930 FLNCQ14315 2725 aa9.12□□□□□ -0.95
SSBP3-212ENST00000528930 NUP210Q8TEM1 1887 aaPredicted RBP9.12□□□□□ -0.95
SSBP3-212ENST00000528930 A0A1W2PQ27 194 aa9.11□□□□□ -0.95
SSBP3-212ENST00000528930 A0A1W2PQ64 194 aa9.11□□□□□ -0.95
SSBP3-212ENST00000528930 A0A1W2PQD8 194 aa9.11□□□□□ -0.95
SSBP3-212ENST00000528930 WDR27A2RRH5 827 aa9.11□□□□□ -0.95
SSBP3-212ENST00000528930 GOLGA8IPA6NC78 632 aa9.11□□□□□ -0.95
SSBP3-212ENST00000528930 GOLGA8JA6NMD2 632 aa9.11□□□□□ -0.95
SSBP3-212ENST00000528930 TGFB1I1O43294 461 aa9.11□□□□□ -0.95
SSBP3-212ENST00000528930 XPOTO43592 962 aaKnown RBP9.11□□□□□ -0.95
SSBP3-212ENST00000528930 ABLIM3O94929 683 aa9.11□□□□□ -0.95
SSBP3-212ENST00000528930 LDHAP00338 332 aaKnown RBP9.11□□□□□ -0.95
SSBP3-212ENST00000528930 MCM4P33991 863 aa9.11□□□□□ -0.95
SSBP3-212ENST00000528930 NDUFA8P51970 172 aa9.11□□□□□ -0.95
SSBP3-212ENST00000528930 LILRA4P59901 499 aa9.11□□□□□ -0.95
SSBP3-212ENST00000528930 ROR1Q01973 937 aa9.11□□□□□ -0.95
SSBP3-212ENST00000528930 SERINC3Q13530 473 aa9.11□□□□□ -0.95
SSBP3-212ENST00000528930 GRM2Q14416 872 aa9.11□□□□□ -0.95
SSBP3-212ENST00000528930 TMEM132DQ14C87 1099 aa9.11□□□□□ -0.95
SSBP3-212ENST00000528930 KRTAP21-3Q3LHN1 58 aa9.11□□□□□ -0.95
SSBP3-212ENST00000528930 C9orf57Q5W0N0 161 aa9.11□□□□□ -0.95
SSBP3-212ENST00000528930 SCARA3Q6AZY7 606 aa9.11□□□□□ -0.95
SSBP3-212ENST00000528930 SLC8B1Q6J4K2 584 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms