RNA–Protein interactions for RNA: ENST00000528441.1

CMTM1-210, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

TSL 1 (best)

Gene CMTM1, Length 979 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-210ENST00000528441 YWHAEP62258 255 aaKnown RBP9.63□□□□□ -0.87
CMTM1-210ENST00000528441 TNK2Q07912 1038 aa9.63□□□□□ -0.87
CMTM1-210ENST00000528441 PPP3CAQ08209 521 aa9.63□□□□□ -0.87
CMTM1-210ENST00000528441 LRMPQ12912 555 aa9.63□□□□□ -0.87
CMTM1-210ENST00000528441 TAF10Q12962 218 aa9.63□□□□□ -0.87
CMTM1-210ENST00000528441 NR1H3Q13133 447 aa9.63□□□□□ -0.87
CMTM1-210ENST00000528441 CAMK4Q16566 473 aa9.63□□□□□ -0.87
CMTM1-210ENST00000528441 NFIL3Q16649 462 aa9.63□□□□□ -0.87
CMTM1-210ENST00000528441 ANKRD40Q6AI12 368 aa9.63□□□□□ -0.87
CMTM1-210ENST00000528441 UNC93AQ86WB7 457 aa9.63□□□□□ -0.87
CMTM1-210ENST00000528441 FBXL13Q8NEE6 735 aa9.63□□□□□ -0.87
CMTM1-210ENST00000528441 PDZD8Q8NEN9 1154 aa9.63□□□□□ -0.87
CMTM1-210ENST00000528441 SH3RF2Q8TEC5 729 aa9.63□□□□□ -0.87
CMTM1-210ENST00000528441 ATRIPQ8WXE1 791 aa9.63□□□□□ -0.87
CMTM1-210ENST00000528441 USP13Q92995 863 aaPredicted RBP9.63□□□□□ -0.87
CMTM1-210ENST00000528441 RSPRY1Q96DX4 576 aa9.63□□□□□ -0.87
CMTM1-210ENST00000528441 SPATA17Q96L03 361 aa9.63□□□□□ -0.87
CMTM1-210ENST00000528441 C8orf48Q96LL4 319 aa9.63□□□□□ -0.87
CMTM1-210ENST00000528441 HEXIM2Q96MH2 286 aaKnown RBP9.63□□□□□ -0.87
CMTM1-210ENST00000528441 CYP2S1Q96SQ9 504 aa9.63□□□□□ -0.87
CMTM1-210ENST00000528441 PKMYT1Q99640 499 aa9.63□□□□□ -0.87
CMTM1-210ENST00000528441 SDCBP2Q9H190 292 aa9.63□□□□□ -0.87
CMTM1-210ENST00000528441 XYLT2Q9H1B5 865 aa9.63□□□□□ -0.87
CMTM1-210ENST00000528441 VRTNQ9H8Y1 702 aa9.63□□□□□ -0.87
CMTM1-210ENST00000528441 CYP3A43Q9HB55 503 aa9.63□□□□□ -0.87
CMTM1-210ENST00000528441 METTL14Q9HCE5 456 aaKnown RBP9.63□□□□□ -0.87
CMTM1-210ENST00000528441 CCL26Q9Y258 94 aa9.63□□□□□ -0.87
CMTM1-210ENST00000528441 R4GN57 208 aa9.63□□□□□ -0.87
CMTM1-210ENST00000528441 MYO16Q9Y6X6 1858 aa9.63□□□□□ -0.87
CMTM1-210ENST00000528441 NCANO14594 1321 aa9.62□□□□□ -0.87
CMTM1-210ENST00000528441 OBSL1O75147 1896 aa9.62□□□□□ -0.87
CMTM1-210ENST00000528441 KIF26AQ9ULI4 1882 aaPredicted RBP9.62□□□□□ -0.87
CMTM1-210ENST00000528441 SCAMP3O14828 347 aaKnown RBP9.62□□□□□ -0.87
CMTM1-210ENST00000528441 NFATC1O95644 943 aa9.62□□□□□ -0.87
CMTM1-210ENST00000528441 FGFR1OPO95684 399 aaKnown RBP9.62□□□□□ -0.87
CMTM1-210ENST00000528441 GLULP15104 373 aa9.62□□□□□ -0.87
CMTM1-210ENST00000528441 GTF2H1P32780 548 aa9.62□□□□□ -0.87
CMTM1-210ENST00000528441 CTHP32929 405 aa9.62□□□□□ -0.87
CMTM1-210ENST00000528441 ASPAP45381 313 aa9.62□□□□□ -0.87
CMTM1-210ENST00000528441 PPP3CCP48454 512 aa9.62□□□□□ -0.87
CMTM1-210ENST00000528441 SLC5A3P53794 718 aa9.62□□□□□ -0.87
CMTM1-210ENST00000528441 USP46P62068 366 aa9.62□□□□□ -0.87
CMTM1-210ENST00000528441 GOLGA8FQ08AF8 430 aa9.62□□□□□ -0.87
CMTM1-210ENST00000528441 GOLGA8DPQ0D2H9 430 aa9.62□□□□□ -0.87
CMTM1-210ENST00000528441 FCHO2Q0JRZ9 810 aa9.62□□□□□ -0.87
CMTM1-210ENST00000528441 GRSF1Q12849 480 aaKnown RBP eCLIP9.62□□□□□ -0.87
CMTM1-210ENST00000528441 PAK1Q13153 545 aa9.62□□□□□ -0.87
CMTM1-210ENST00000528441 RUNX3Q13761 415 aa9.62□□□□□ -0.87
CMTM1-210ENST00000528441 PDGFRLQ15198 375 aa9.62□□□□□ -0.87
CMTM1-210ENST00000528441 RALGPS2Q86X27 583 aaPredicted RBP9.62□□□□□ -0.87
CMTM1-210ENST00000528441 TTC39CQ8N584 583 aa9.62□□□□□ -0.87
CMTM1-210ENST00000528441 ENGASEQ8NFI3 743 aa9.62□□□□□ -0.87
CMTM1-210ENST00000528441 ATP2A3Q93084 1043 aa9.62□□□□□ -0.87
CMTM1-210ENST00000528441 CYFIP2Q96F07 1278 aa9.62□□□□□ -0.87
CMTM1-210ENST00000528441 DHTKD1Q96HY7 919 aaPredicted RBP9.62□□□□□ -0.87
CMTM1-210ENST00000528441 CEP295NLQ96MC4 621 aa9.62□□□□□ -0.87
CMTM1-210ENST00000528441 KCNK16Q96T55 309 aa9.62□□□□□ -0.87
CMTM1-210ENST00000528441 OSBPL6Q9BZF3 934 aa9.62□□□□□ -0.87
CMTM1-210ENST00000528441 GZF1Q9H116 711 aaPredicted RBP9.62□□□□□ -0.87
CMTM1-210ENST00000528441 FBXO44Q9H4M3 255 aa9.62□□□□□ -0.87
CMTM1-210ENST00000528441 RAB20Q9NX57 234 aa9.62□□□□□ -0.87
CMTM1-210ENST00000528441 HMGXB4Q9UGU5 601 aa9.62□□□□□ -0.87
CMTM1-210ENST00000528441 RAB23Q9ULC3 237 aa9.62□□□□□ -0.87
CMTM1-210ENST00000528441 CPQQ9Y646 472 aa9.62□□□□□ -0.87
CMTM1-210ENST00000528441 WNT6Q9Y6F9 365 aa9.62□□□□□ -0.87
CMTM1-210ENST00000528441 PTPRDP23468 1912 aa9.62□□□□□ -0.87
CMTM1-210ENST00000528441 DENND4CQ5VZ89 1909 aa9.62□□□□□ -0.87
CMTM1-210ENST00000528441 GOLGA6L22H0YM25 854 aa9.61□□□□□ -0.87
CMTM1-210ENST00000528441 PES1O00541 588 aaKnown RBP9.61□□□□□ -0.87
CMTM1-210ENST00000528441 TADA3O75528 432 aa9.61□□□□□ -0.87
CMTM1-210ENST00000528441 ARSAP15289 507 aa9.61□□□□□ -0.87
CMTM1-210ENST00000528441 ACO1P21399 889 aaKnown RBP9.61□□□□□ -0.87
CMTM1-210ENST00000528441 CCR3P51677 355 aa9.61□□□□□ -0.87
CMTM1-210ENST00000528441 CACNA2D1P54289 1103 aa9.61□□□□□ -0.87
CMTM1-210ENST00000528441 CLDN10P78369 228 aa9.61□□□□□ -0.87
CMTM1-210ENST00000528441 ZCWPW2Q504Y3 356 aa9.61□□□□□ -0.87
CMTM1-210ENST00000528441 DGKKQ5KSL6 1271 aa9.61□□□□□ -0.87
CMTM1-210ENST00000528441 HECTD3Q5T447 861 aa9.61□□□□□ -0.87
CMTM1-210ENST00000528441 TSSK4Q6SA08 328 aa9.61□□□□□ -0.87
CMTM1-210ENST00000528441 TMEM150AQ86TG1 271 aa9.61□□□□□ -0.87
CMTM1-210ENST00000528441 DDX42Q86XP3 938 aaKnown RBP eCLIP9.61□□□□□ -0.87
CMTM1-210ENST00000528441 ADSSL1Q8N142 457 aa9.61□□□□□ -0.87
CMTM1-210ENST00000528441 C12orf29Q8N999 325 aa9.61□□□□□ -0.87
CMTM1-210ENST00000528441 SECISBP2LQ93073 1101 aaKnown RBP9.61□□□□□ -0.87
CMTM1-210ENST00000528441 MYRFLQ96LU7 910 aa9.61□□□□□ -0.87
CMTM1-210ENST00000528441 NT5C1BQ96P26 610 aa9.61□□□□□ -0.87
CMTM1-210ENST00000528441 APOBEC3GQ9HC16 384 aaKnown RBP9.61□□□□□ -0.87
CMTM1-210ENST00000528441 TRPV5Q9NQA5 729 aa9.61□□□□□ -0.87
CMTM1-210ENST00000528441 TLR8Q9NR97 1041 aaKnown RBP9.61□□□□□ -0.87
CMTM1-210ENST00000528441 RBM12Q9NTZ6 932 aaKnown RBP9.61□□□□□ -0.87
CMTM1-210ENST00000528441 GMIPQ9P107 970 aa9.61□□□□□ -0.87
CMTM1-210ENST00000528441 HESX1Q9UBX0 185 aa9.61□□□□□ -0.87
CMTM1-210ENST00000528441 CHORDC1Q9UHD1 332 aaPredicted RBP9.61□□□□□ -0.87
CMTM1-210ENST00000528441 NME7Q9Y5B8 376 aa9.61□□□□□ -0.87
CMTM1-210ENST00000528441 SOBPA7XYQ1 873 aa9.6□□□□□ -0.87
CMTM1-210ENST00000528441 LEFTY2O00292 366 aa9.6□□□□□ -0.87
CMTM1-210ENST00000528441 SLC9A3R1O14745 358 aaPredicted RBP9.6□□□□□ -0.87
CMTM1-210ENST00000528441 SP9P0CG40 484 aa9.6□□□□□ -0.87
CMTM1-210ENST00000528441 CCDC192P0DO97 292 aa9.6□□□□□ -0.87
CMTM1-210ENST00000528441 CXCL12P48061 93 aa9.6□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms