RNA–Protein interactions for RNA: ENST00000527733.5

USP47-207, Transcript of ubiquitin specific peptidase 47, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene USP47, Length 4,525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-207ENST00000527733 ST8SIA6P61647 398 aa15.69■□□□□ 0.1
USP47-207ENST00000527733 PPIL6Q8IXY8 311 aa15.69■□□□□ 0.1
USP47-207ENST00000527733 TTC8Q8TAM2 541 aa15.69■□□□□ 0.1
USP47-207ENST00000527733 LPPQ93052 612 aa15.69■□□□□ 0.1
USP47-207ENST00000527733 SENP1Q9P0U3 644 aa15.69■□□□□ 0.1
USP47-207ENST00000527733 TYK2P29597 1187 aa15.69■□□□□ 0.1
USP47-207ENST00000527733 PPP2R2AP63151 447 aa15.69■□□□□ 0.1
USP47-207ENST00000527733 RIN2Q8WYP3 895 aaPredicted RBP15.69■□□□□ 0.1
USP47-207ENST00000527733 ZBED3Q96IU2 234 aaPredicted RBP15.69■□□□□ 0.1
USP47-207ENST00000527733 PGLYRP2Q96PD5 576 aa15.69■□□□□ 0.1
USP47-207ENST00000527733 TLR8Q9NR97 1041 aaKnown RBP15.69■□□□□ 0.1
USP47-207ENST00000527733 WRAP73Q9P2S5 460 aaPredicted RBP15.69■□□□□ 0.1
USP47-207ENST00000527733 ADAM21Q9UKJ8 722 aa15.69■□□□□ 0.1
USP47-207ENST00000527733 GOLGA8QA0A0J9YX86 632 aa15.68■□□□□ 0.1
USP47-207ENST00000527733 GOLGA8OA6NCC3 632 aa15.68■□□□□ 0.1
USP47-207ENST00000527733 F5H5T6 163 aa15.68■□□□□ 0.1
USP47-207ENST00000527733 GOLGA8NF8WBI6 632 aa15.68■□□□□ 0.1
USP47-207ENST00000527733 CCDC130P13994 396 aa15.68■□□□□ 0.1
USP47-207ENST00000527733 ARHGAP1Q07960 439 aa15.68■□□□□ 0.1
USP47-207ENST00000527733 PDCLQ13371 301 aa15.68■□□□□ 0.1
USP47-207ENST00000527733 RASSF3Q86WH2 238 aa15.68■□□□□ 0.1
USP47-207ENST00000527733 SLTMQ9NWH9 1034 aaKnown RBP eCLIP15.68■□□□□ 0.1
USP47-207ENST00000527733 MORF4L1Q9UBU8 362 aa15.68■□□□□ 0.1
USP47-207ENST00000527733 IPPQ9Y573 584 aa15.68■□□□□ 0.1
USP47-207ENST00000527733 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP15.68■□□□□ 0.1
USP47-207ENST00000527733 MBL2P11226 248 aaPredicted RBP15.68■□□□□ 0.1
USP47-207ENST00000527733 TMPRSS15P98073 1019 aa15.68■□□□□ 0.1
USP47-207ENST00000527733 ZNF177Q13360 481 aaPredicted RBP15.68■□□□□ 0.1
USP47-207ENST00000527733 ACAP1Q15027 740 aa15.68■□□□□ 0.1
USP47-207ENST00000527733 CCNG2Q16589 344 aa15.68■□□□□ 0.1
USP47-207ENST00000527733 EDEM1Q92611 657 aa15.68■□□□□ 0.1
USP47-207ENST00000527733 OPLAHO14841 1288 aa15.68■□□□□ 0.1
USP47-207ENST00000527733 SPAG6O75602 509 aa15.68■□□□□ 0.1
USP47-207ENST00000527733 MAGEA4P43358 317 aa15.68■□□□□ 0.1
USP47-207ENST00000527733 DENND1BQ6P3S1 775 aa15.68■□□□□ 0.1
USP47-207ENST00000527733 NT5DC3Q86UY8 548 aa15.68■□□□□ 0.1
USP47-207ENST00000527733 DDX20Q9UHI6 824 aaKnown RBP15.68■□□□□ 0.1
USP47-207ENST00000527733 BDNFP23560 247 aa15.67■□□□□ 0.1
USP47-207ENST00000527733 TUFMP49411 452 aaKnown RBP15.67■□□□□ 0.1
USP47-207ENST00000527733 KPNA1P52294 538 aaPredicted RBP15.67■□□□□ 0.1
USP47-207ENST00000527733 LAMB3Q13751 1172 aa15.67■□□□□ 0.1
USP47-207ENST00000527733 IRF2BP2Q7Z5L9 587 aa15.67■□□□□ 0.1
USP47-207ENST00000527733 HELQQ8TDG4 1101 aa15.67■□□□□ 0.1
USP47-207ENST00000527733 HSFY1Q96LI6 401 aa15.67■□□□□ 0.1
USP47-207ENST00000527733 DYRK4Q9NR20 520 aa15.67■□□□□ 0.1
USP47-207ENST00000527733 DPP7Q9UHL4 492 aa15.67■□□□□ 0.1
USP47-207ENST00000527733 PCDHGC5Q9Y5F6 944 aa15.67■□□□□ 0.1
USP47-207ENST00000527733 MAP3K6O95382 1288 aa15.67■□□□□ 0.1
USP47-207ENST00000527733 CCR1P32246 355 aa15.67■□□□□ 0.1
USP47-207ENST00000527733 KYNUQ16719 465 aa15.67■□□□□ 0.1
USP47-207ENST00000527733 SLC39A12Q504Y0 691 aa15.67■□□□□ 0.1
USP47-207ENST00000527733 RABGAP1LQ5R372 815 aa15.67■□□□□ 0.1
USP47-207ENST00000527733 NAPEPLDQ6IQ20 393 aa15.67■□□□□ 0.1
USP47-207ENST00000527733 ACTL9Q8TC94 416 aa15.67■□□□□ 0.1
USP47-207ENST00000527733 PCDHA3Q9Y5H8 950 aa15.67■□□□□ 0.1
USP47-207ENST00000527733 C11orf97A0A1B0GVM6 126 aaPredicted RBP15.67■□□□□ 0.1
USP47-207ENST00000527733 SP2Q02086 613 aa15.67■□□□□ 0.1
USP47-207ENST00000527733 GRIK3Q13003 919 aa15.67■□□□□ 0.1
USP47-207ENST00000527733 IFT88Q13099 833 aa15.67■□□□□ 0.1
USP47-207ENST00000527733 DRP2Q13474 957 aa15.67■□□□□ 0.1
USP47-207ENST00000527733 SMAD1Q15797 465 aaKnown RBP15.67■□□□□ 0.1
USP47-207ENST00000527733 CCL14Q16627 93 aa15.67■□□□□ 0.1
USP47-207ENST00000527733 ERMARDQ5T6L9 678 aa15.67■□□□□ 0.1
USP47-207ENST00000527733 LDLRAD1Q5T700 205 aa15.67■□□□□ 0.1
USP47-207ENST00000527733 ITIH5Q86UX2 942 aa15.67■□□□□ 0.1
USP47-207ENST00000527733 DEFB106AQ8N104 65 aa15.67■□□□□ 0.1
USP47-207ENST00000527733 PITPNM3Q9BZ71 974 aa15.67■□□□□ 0.1
USP47-207ENST00000527733 XAB2Q9HCS7 855 aaKnown RBP15.67■□□□□ 0.1
USP47-207ENST00000527733 ZCCHC17Q9NP64 241 aaKnown RBP15.67■□□□□ 0.1
USP47-207ENST00000527733 TAS2R14Q9NYV8 317 aa15.67■□□□□ 0.1
USP47-207ENST00000527733 BCAP29Q9UHQ4 241 aa15.67■□□□□ 0.1
USP47-207ENST00000527733 CHMP2BQ9UQN3 213 aa15.67■□□□□ 0.1
USP47-207ENST00000527733 C22orf31O95567 290 aa15.67■□□□□ 0.1
USP47-207ENST00000527733 YWHAQP27348 245 aa15.67■□□□□ 0.1
USP47-207ENST00000527733 FMO1Q01740 532 aa15.67■□□□□ 0.1
USP47-207ENST00000527733 MAP3K10Q02779 954 aa15.67■□□□□ 0.1
USP47-207ENST00000527733 TMEM199Q8N511 208 aa15.67■□□□□ 0.1
USP47-207ENST00000527733 FAM84AQ96KN4 292 aa15.67■□□□□ 0.1
USP47-207ENST00000527733 PPCSQ9HAB8 311 aa15.67■□□□□ 0.1
USP47-207ENST00000527733 CDH9Q9ULB4 789 aa15.67■□□□□ 0.1
USP47-207ENST00000527733 PCDHB8Q9UN66 801 aa15.67■□□□□ 0.1
USP47-207ENST00000527733 ARIH2O95376 493 aa15.66■□□□□ 0.1
USP47-207ENST00000527733 FDFT1P37268 417 aa15.66■□□□□ 0.1
USP47-207ENST00000527733 CDH18Q13634 790 aa15.66■□□□□ 0.1
USP47-207ENST00000527733 LRIG3Q6UXM1 1119 aa15.66■□□□□ 0.1
USP47-207ENST00000527733 DAW1Q8N136 415 aa15.66■□□□□ 0.1
USP47-207ENST00000527733 IPMKQ8NFU5 416 aa15.66■□□□□ 0.1
USP47-207ENST00000527733 LNX1Q8TBB1 728 aaPredicted RBP15.66■□□□□ 0.1
USP47-207ENST00000527733 SEMA4DQ92854 862 aa15.66■□□□□ 0.1
USP47-207ENST00000527733 EXT2Q93063 718 aa15.66■□□□□ 0.1
USP47-207ENST00000527733 CDK5RAP1Q96SZ6 601 aaKnown RBP15.66■□□□□ 0.1
USP47-207ENST00000527733 PDZD7Q9H5P4 517 aa15.66■□□□□ 0.1
USP47-207ENST00000527733 ADCY6O43306 1168 aa15.66■□□□□ 0.1
USP47-207ENST00000527733 TSPAN1O60635 241 aa15.66■□□□□ 0.1
USP47-207ENST00000527733 ANXA9O76027 345 aa15.66■□□□□ 0.1
USP47-207ENST00000527733 STX1BP61266 288 aa15.66■□□□□ 0.1
USP47-207ENST00000527733 GRB14Q14449 540 aa15.66■□□□□ 0.1
USP47-207ENST00000527733 UGP2Q16851 508 aa15.66■□□□□ 0.1
USP47-207ENST00000527733 ZBTB10Q96DT7 871 aa15.66■□□□□ 0.1
USP47-207ENST00000527733 DMAC2Q9NW81 257 aa15.66■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 51.9 ms